Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_P01
         (956 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009308-1|AAH09308.1|  468|Homo sapiens C16orf58 protein protein.    145   2e-34
AK222913-1|BAD96633.1|  468|Homo sapiens hypothetical protein FL...   145   2e-34
AK023930-1|BAB14730.1|  468|Homo sapiens protein ( Homo sapiens ...   145   2e-34

>BC009308-1|AAH09308.1|  468|Homo sapiens C16orf58 protein protein.
          Length = 468

 Score =  145 bits (352), Expect = 2e-34
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +2

Query: 377 VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 556
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 557 VIKDGCGHLGRILFAFTRGTCLDAYSKKWRLYADILNDAAMCIEIALP 700
           ++KD  G LGRI+FA+ +G+ LD  +K+WRL+ADILND AM +EI  P
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAP 183


>AK222913-1|BAD96633.1|  468|Homo sapiens hypothetical protein
           FLJ13868 variant protein.
          Length = 468

 Score =  145 bits (352), Expect = 2e-34
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +2

Query: 377 VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 556
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 557 VIKDGCGHLGRILFAFTRGTCLDAYSKKWRLYADILNDAAMCIEIALP 700
           ++KD  G LGRI+FA+ +G+ LD  +K+WRL+ADILND AM +EI  P
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAP 183


>AK023930-1|BAB14730.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13868 fis, clone THYRO1001271. ).
          Length = 468

 Score =  145 bits (352), Expect = 2e-34
 Identities = 65/108 (60%), Positives = 85/108 (78%)
 Frame = +2

Query: 377 VFLPKGYPDSVSRDYSAYQIWDTAQAFCSTITGTLATQEVLRGVGVGDTTATPLAATVTW 556
           VFLP+G+PDSVS DY  YQ+WD+ QAF S+++G+LATQ VL G+GVG+  AT  AAT TW
Sbjct: 76  VFLPQGFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATW 135

Query: 557 VIKDGCGHLGRILFAFTRGTCLDAYSKKWRLYADILNDAAMCIEIALP 700
           ++KD  G LGRI+FA+ +G+ LD  +K+WRL+ADILND AM +EI  P
Sbjct: 136 LVKDSTGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAP 183


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,073,820
Number of Sequences: 237096
Number of extensions: 2121543
Number of successful extensions: 4193
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4193
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12658656216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)