Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M19
(934 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein. 32 3.4
BC016054-1|AAH16054.1| 873|Homo sapiens NAV2 protein protein. 32 3.4
AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens ... 32 3.4
AK001495-1|BAA91723.1| 874|Homo sapiens protein ( Homo sapiens ... 32 3.4
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein. 32 3.4
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible... 32 3.4
AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible... 32 3.4
AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein. 32 3.4
AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein. 32 3.4
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein. 32 3.4
>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
Length = 2432
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1804 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1847
>BC016054-1|AAH16054.1| 873|Homo sapiens NAV2 protein protein.
Length = 873
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 245 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 288
>AK074287-1|BAB85038.1| 1079|Homo sapiens protein ( Homo sapiens
cDNA FLJ23707 fis, clone HEP11670. ).
Length = 1079
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 865 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 908
>AK001495-1|BAA91723.1| 874|Homo sapiens protein ( Homo sapiens
cDNA FLJ10633 fis, clone NT2RP2005640. ).
Length = 874
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 246 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 289
>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
Length = 2488
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1860 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1903
>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1d protein.
Length = 2432
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1804 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1847
>AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible in
neuroblastoma cells RAINB1 protein.
Length = 2429
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1801 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1844
>AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.
Length = 2429
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1801 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1844
>AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.
Length = 2365
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1737 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1780
>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
Length = 2464
Score = 31.9 bits (69), Expect = 3.4
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 657 ESDDDNLPEGIGTPHLEAAGKTPRLKDKGGYSHVRSCLPDEAKS 788
E D +LP PH + G TP L++ S + C+ EA++
Sbjct: 1836 EMTDSSLPSSPKLPHNGSTGSTPLLRNSHSNSLISECMDSEAET 1879
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,583,703
Number of Sequences: 237096
Number of extensions: 1853141
Number of successful extensions: 7514
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7508
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12214492840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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