Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_M12
         (923 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   3.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   3.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   6.8  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 40  KIFESLESFGSVGCDICFDNI 102
           K++E   +    GCD+  DN+
Sbjct: 355 KLYEETYALAPAGCDLTIDNL 375


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 264 YCLRNFLNRIMYLI 305
           YCL +FLN I+Y +
Sbjct: 148 YCLFSFLNTIVYCV 161


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = -2

Query: 136 SRFLEPCCEKQQYYQNKCHNRPNRT 62
           SR ++PC  K      +C   PN T
Sbjct: 76  SRSIDPCASKYCGIGKECELSPNST 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,796
Number of Sequences: 438
Number of extensions: 4205
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)