Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP03_F_M04
(891 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 35 0.46
U79458-1|AAD10951.1| 268|Homo sapiens WW domain binding protein... 32 3.2
BC010616-1|AAH10616.1| 261|Homo sapiens WW domain binding prote... 32 3.2
BC007452-1|AAH07452.1| 261|Homo sapiens WW domain binding prote... 32 3.2
AF087866-1|AAP97175.1| 261|Homo sapiens WW-domain binding prote... 32 3.2
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 5.6
U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein. 31 5.6
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 5.6
BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif prote... 31 5.6
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 5.6
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 5.6
AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens ... 31 5.6
K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary ... 31 7.4
AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein. 31 7.4
BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4) precu... 30 9.8
AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adapto... 30 9.8
AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4) precu... 30 9.8
AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73... 30 9.8
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 34.7 bits (76), Expect = 0.46
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPPXXXQ 698
PPP PPPP G + PPPPP Q
Sbjct: 78 PPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQ 109
>U79458-1|AAD10951.1| 268|Homo sapiens WW domain binding protein-2
protein.
Length = 268
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPP 683
PPP F P PP G + PPPP
Sbjct: 180 PPPPPEFYPGPPMMDGAMGYVQPPPPP 206
>BC010616-1|AAH10616.1| 261|Homo sapiens WW domain binding protein
2 protein.
Length = 261
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPP 683
PPP F P PP G + PPPP
Sbjct: 173 PPPPPEFYPGPPMMDGAMGYVQPPPPP 199
>BC007452-1|AAH07452.1| 261|Homo sapiens WW domain binding protein
2 protein.
Length = 261
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPP 683
PPP F P PP G + PPPP
Sbjct: 173 PPPPPEFYPGPPMMDGAMGYVQPPPPP 199
>AF087866-1|AAP97175.1| 261|Homo sapiens WW-domain binding protein
2 protein.
Length = 261
Score = 31.9 bits (69), Expect = 3.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPP 683
PPP F P PP G + PPPP
Sbjct: 173 PPPPPEFYPGPPMMDGAMGYVQPPPPP 199
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G + PPPPP
Sbjct: 582 PPPPP---PPPPGSAGMMYAPPPPPPPP 606
>U39402-1|AAC99998.1| 367|Homo sapiens 199G4 protein.
Length = 367
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G F PPPP
Sbjct: 313 PPPPGIAPPPPPGFGPHMFHPMGPPPP 339
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G + PPPPP
Sbjct: 582 PPPPP---PPPPVSAGMMYAPPPPPPPP 606
>BC003402-1|AAH03402.1| 420|Homo sapiens RNA binding motif protein
22 protein.
Length = 420
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G F PPPP
Sbjct: 366 PPPPGIAPPPPPGFGPHMFHPMGPPPP 392
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 31.1 bits (67), Expect = 5.6
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G + PPPPP
Sbjct: 208 PPPPP---PPPPGSAGMMYAPPPPPPPP 232
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G PP PP
Sbjct: 294 PPPPASIPPPPPLPSGLGSLSPAPPMPP 321
>AK001152-1|BAA91521.1| 420|Homo sapiens protein ( Homo sapiens
cDNA FLJ10290 fis, clone MAMMA1002385, weakly similar to
RIBONUCLEOPROTEIN RB97D. ).
Length = 420
Score = 31.1 bits (67), Expect = 5.6
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G F PPPP
Sbjct: 366 PPPPGIAPPPPPGFGPHMFHPMGPPPP 392
>K02575-1|AAA36502.1| 173|Homo sapiens protein ( Human salivary
proline-rich protein 1 gene, segment 1. ).
Length = 173
Score = 30.7 bits (66), Expect = 7.4
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -3
Query: 343 GGVXXPPPXKIXKGXGAXFPPQK--GXPPRGAREPGXXXXXXFPRGXP 206
G PPP K G PP K G PP+G +P P+G P
Sbjct: 17 GNPQGPPPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 64
>AC007956-2|AAF61275.1| 1822|Homo sapiens unknown protein.
Length = 1822
Score = 30.7 bits (66), Expect = 7.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +3
Query: 603 PPPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PPP PPPP G + PPPPP
Sbjct: 82 PPPPL---PPPPVMPGGGYGDWQPPPPP 106
>BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G PPPPP
Sbjct: 578 PPPDFVPPPPPSYAGIAGSELPPPPPP 604
>AY152730-1|AAN75525.1| 665|Homo sapiens Rap1-interacting adaptor
molecule protein.
Length = 665
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G PPPPP
Sbjct: 578 PPPDFVPPPPPSYAGIAGSELPPPPPP 604
>AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G PPPPP
Sbjct: 578 PPPDFVPPPPPSYAGIAGSELPPPPPP 604
>AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73
protein.
Length = 666
Score = 30.3 bits (65), Expect = 9.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 606 PPXXXFXPPPPXQXGXXFFXXXPPPPP 686
PP PPPP G PPPPP
Sbjct: 578 PPPDFVPPPPPSYAGIAGSELPPPPPP 604
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,842,508
Number of Sequences: 237096
Number of extensions: 1477976
Number of successful extensions: 5704
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4333
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -