Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L10
         (903 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   2.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   3.8  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   5.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   5.0  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               22   6.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   6.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 327  GERAKLTCSPDYAYGQQGHPGVIPPNST 410
            GER  L  S DY Y  +G  G    +ST
Sbjct: 1579 GERVMLKASEDYRYSVRGLCGNFDHDST 1606


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 264 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 356
           FRI   E  R W     K+ + +  KL C P
Sbjct: 249 FRIQVDECDRLWILDSGKVDIAKGGKLACPP 279


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = -3

Query: 451 CIYSRRRSSTSKISVELGGMTPGWPC*P*A*SGEQVNLARSPTDIFATPSSQPRITSDFP 272
           C   R+  S S   +E G   P  P           + + +PT + ++P S+ +   D P
Sbjct: 568 CPRFRKLDSPSDSGIESGTEKPDKPA--------SSSASSAPTSVCSSPRSEDKEVEDMP 619

Query: 271 IL 266
           +L
Sbjct: 620 VL 621


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 100 YFFEIKILALAMRSRQVKILRNSL 29
           YF+EI    L + S   KI RNSL
Sbjct: 539 YFYEIDNWMLDLNSGLNKITRNSL 562


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 100 YFFEIKILALAMRSRQVKILRNSL 29
           YF+EI    L + S   KI RNSL
Sbjct: 539 YFYEIDNWMLDLNSGLNKITRNSL 562


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 737 NYNDKMLLRNVSVVR*NRIDDLQNFI 660
           NYND   +RN  +V  + +D  Q ++
Sbjct: 160 NYNDPSNVRNCELVGLHDLDQSQEYV 185


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 44  DFDLSRPHCESEDLYLEKIEKYIVNNGCY 130
           DF   +   + ED+    I+KY+ N  C+
Sbjct: 50  DFIKMQELLQEEDISEGNIKKYLTNYSCF 78


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 7/26 (26%), Positives = 18/26 (69%)
 Frame = -3

Query: 748 YCDEITMTKCS*GM*VLSDKIESMIF 671
           +C+++++ + +  M VLSD  + ++F
Sbjct: 347 FCNDLSIDRSTNTMYVLSDNFQQLLF 372


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 731 NDKMLLRNVSVVR*NRIDDLQN 666
           N K L+RN   V  N+ D++QN
Sbjct: 404 NVKELIRNTHCVNNNQNDNIQN 425


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,818
Number of Sequences: 438
Number of extensions: 5364
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)