Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_L09
         (936 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          27   0.24 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      27   0.24 
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          27   0.24 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.7  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    24   2.3  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    23   4.0  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    23   4.0  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   5.3  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 479 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEK 643
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHK 496


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 479 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEK 643
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K
Sbjct: 442 ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHK 496


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 27.1 bits (57), Expect = 0.24
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 479 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEK 643
           E   PGV   +  + +L T  +   S LN  +  Q+H + +    + R   LN K
Sbjct: 68  ELNFPGVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHK 122


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 560 LNRIIDHQTHHRLREAQGRKRAEDLN 637
           L R  + +THH +R  + + R+ DLN
Sbjct: 72  LLRFENPETHHPIRHGRRQSRSMDLN 97


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 488 LPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLRE-AQGRKRA 625
           LPGV      ++QL T   + +  L+ +  HQ+  +  E  Q R RA
Sbjct: 462 LPGVTIQNVDVSQLVTLFTDFYVDLDAVTGHQSQQQQEEQTQSRVRA 508


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 532 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 395
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 30  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = -3

Query: 532 LQLCKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITR 395
           +++ K  C++   R  +L  ++  ++H  +    K+I  T+  ITR
Sbjct: 13  MRILKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -2

Query: 239 DKNILRHYQEVQTLTRHFSKEHH 171
           DKN  RHY + ++  +++S   H
Sbjct: 570 DKNQCRHYLDAKSSVQNYSLAKH 592


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,076
Number of Sequences: 438
Number of extensions: 3492
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)