Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP03_F_K09
         (904 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.8  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          23   3.8  
AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic hor...    22   8.8  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 505 WSQTYIATFSVVLAIVLKYGTSLSKFLWSS 416
           W Q +     +  +I+L  GT+L + +W +
Sbjct: 267 WGQGHAILKGLKTSIILMNGTTLPQIMWGT 296


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 610 KSLTPLVTEVMFLMKFPQILTNKILEILNVFIMKKYFILLLLG 738
           + L PL      +   PQ LT++ +EIL     K   + L LG
Sbjct: 99  RKLPPLHPHTAMVTHLPQTLTSENVEILLEHSSKLVELFLSLG 141


>AJ876408-1|CAI45289.1|   52|Apis mellifera putative diuretic
           hormone-I protein.
          Length = 52

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -1

Query: 223 AELKVSRRIIDTIGK 179
           A++  +RR+++TIGK
Sbjct: 38  AQIDANRRLLETIGK 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,548
Number of Sequences: 438
Number of extensions: 4954
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)