Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N15
(902 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23) 31 1.7
SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_377| Best HMM Match : IQ (HMM E-Value=0.0002) 30 2.2
SB_8144| Best HMM Match : VWA (HMM E-Value=3.1e-16) 30 2.9
SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8) 26 4.7
SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26) 29 5.1
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079) 29 5.1
SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_58666| Best HMM Match : Vps16_C (HMM E-Value=6.4e-37) 29 6.8
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 29 6.8
SB_14436| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 32.3 bits (70), Expect = 0.55
Identities = 28/103 (27%), Positives = 40/103 (38%)
Frame = +1
Query: 310 NHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDK 489
N K P + ++ NP+ R P N + T N P S Y + K
Sbjct: 955 NPKSPSEAPSLNNPNPRSSCTTPPSSDTTNSSSAGPSATNNASP----SSSPYVASAPGK 1010
Query: 490 DESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQDTVXKIIY 618
D S S + ND+ Y S ES S+ + +DT +IY
Sbjct: 1011 DSS-ASANSWYLLNDSRVSYASFESFSDITKRFPKDTPYVLIY 1052
>SB_46013| Best HMM Match : DUF1129 (HMM E-Value=0.23)
Length = 553
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/66 (24%), Positives = 30/66 (45%)
Frame = +1
Query: 388 SALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQSKESH 567
+++N+ + +N I + NS + D D SI D + NDN ++Y + S
Sbjct: 289 NSINDNDNSINDNDNSIYDNDNSINDNDNSINDNDNSINDNDNSIYDNDNSSIYDNDNSI 348
Query: 568 SENSGT 585
+N +
Sbjct: 349 YDNDNS 354
>SB_40906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 154
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/120 (19%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Frame = +1
Query: 355 QRPEHRDPQDYSALNERKSQDKHTENLIPNLT-NSHKSYGYTGIDKDESIVSQDKVAFTN 531
++ E D ++E + +D+ T N P L N KSY I E ++ ++ + +
Sbjct: 28 RKREKSKGDDDGNVDENEPKDEETANQTPTLKDNDEKSYYKVDIPSSEQRITVEERSDDS 87
Query: 532 DNGNLYQSKESHSENSGTSTQDTVXKIIYVQTDGLQDNQLYQVAGSSGDSIIMSRAQTNK 711
G+L KES+ G + + + Y + ++ + +S +++ +A+ ++
Sbjct: 88 TRGHLGSPKESN--EFGIPSYAQLGRTAYSLESKYKHSEFLETRRTSSIAVLRQKAKEHE 145
>SB_377| Best HMM Match : IQ (HMM E-Value=0.0002)
Length = 1376
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +1
Query: 319 VPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDES 498
V D + V ++ E D L+ + SQ + + N H S+ G+D E+
Sbjct: 694 VKTDDQKVTGLQKKDEIGSELDNCELSSKSSQPESEQVRESKTHNEHVSHAPDGLDTQET 753
Query: 499 IVSQDKVAFTNDNGNLYQSKESHSENS 579
+ S+D+ + T KE +SE+S
Sbjct: 754 VGSKDEDSITERKKT--DQKEGNSESS 778
>SB_8144| Best HMM Match : VWA (HMM E-Value=3.1e-16)
Length = 193
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 373 DPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQ 552
DP + ++ K + + N+ ++ + GYT IDK ++ DK FT + G
Sbjct: 106 DPVIDAPFDKYKGVEMNAVNIKSDIDEQRRQKGYTFIDK--ALTLADKSLFTEEAGMRED 163
Query: 553 S-KESHSENSGTSTQD 597
S K + S + G T+D
Sbjct: 164 SLKVAVSMSDGIQTKD 179
>SB_12387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 295 IIERRNHKVPHDLRNVE---NPSQRPEHRDPQDYSALNERKSQDKHTENLIP 441
+I+ HK P D +PS +H P DYS Q +T++++P
Sbjct: 891 LIDELTHKAPLDYSRAPRYGDPSINTQHMVPLDYSQAPRYCDQSMNTQHMVP 942
>SB_3143| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 322
Score = 29.5 bits (63), Expect = 3.9
Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 7/108 (6%)
Frame = +1
Query: 343 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 522
E+ S H + + ++E+K ++K ENL+ KSY + ++ +S + +
Sbjct: 170 EDNSLNNSHSENDSKNRVSEKKYEEKTGENLVTETYQEQKSYQNSDYERQKSDRERTEAE 229
Query: 523 FTN-DNGNLYQSKESHSENS------GTSTQDTVXKIIYVQTDGLQDN 645
+ + N +SKE+ + +S ST + Y D + DN
Sbjct: 230 SSQITSRNTDESKETFAGSSRLPYDLSHSTAGSADLYAYACADPVDDN 277
>SB_41173| Best HMM Match : Sas10_Utp3 (HMM E-Value=2.8)
Length = 405
Score = 25.8 bits (54), Expect(2) = 4.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +1
Query: 550 QSKESHSENSGTSTQD 597
QS E H+EN G S QD
Sbjct: 8 QSTEKHTENEGNSNQD 23
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 397 NERKSQDKHTEN 432
NE +S +KHTEN
Sbjct: 5 NEGQSTEKHTEN 16
>SB_33446| Best HMM Match : 7tm_1 (HMM E-Value=6.7e-26)
Length = 291
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 70 MAWIVQLILACLFSLNVSCHFYRINNAARIPETPFI-NSDPVNYLQKL 210
M W+ ++AC F L V+ + Y + +T FI NS P+ +K+
Sbjct: 158 MLWLATALIACTFPLWVTSYSYLYIFKSAHAQTQFIVNSSPIEERRKI 205
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +1
Query: 289 DLIIERRNHKVPHDLRNVENPS-QRPEHRDP----QDYSALNERKSQDKHTENLIPNLTN 453
+++ E ++ KV +++E +R +H++ +D + ER+ +D EN+ N+ N
Sbjct: 954 EMVDEEQDRKVKDAEKDLEEVKLERRKHQEELETLKDKTLKVERELRDSQQENIKMNIEN 1013
Query: 454 SHKSYGYTGIDKDESIVSQDK 516
S S + ++ I +DK
Sbjct: 1014 SKLSRKVSSLESSVEIFEKDK 1034
>SB_15491| Best HMM Match : zf-C3HC4 (HMM E-Value=0.079)
Length = 689
Score = 29.1 bits (62), Expect = 5.1
Identities = 24/97 (24%), Positives = 41/97 (42%)
Frame = +1
Query: 307 RNHKVPHDLRNVENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTNSHKSYGYTGID 486
R+H + H+LRN+ R P D++ + + + H S+ Y Y D
Sbjct: 409 RHHPLGHELRNIYE-------RSPLDWNPFDHARRRRYHR-------APSYYDYDYVS-D 453
Query: 487 KDESIVSQDKVAFTNDNGNLYQSKESHSENSGTSTQD 597
+ + V D+ + N N N Y+S + S+ S D
Sbjct: 454 ESDDWVPFDRNSRRNINNNNYESDDDDSDTDMVSDLD 490
>SB_5480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 550 QSKESHSENSGTSTQDTVXKIIYVQTDGLQDN 645
QS+ H E+SG ST+D++ ++ T G + N
Sbjct: 277 QSENGHGESSGASTEDSMQHVLQDVTHGSKVN 308
>SB_58666| Best HMM Match : Vps16_C (HMM E-Value=6.4e-37)
Length = 259
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +1
Query: 382 DYSALNERKSQDKH--TENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNGNLYQS 555
D + ++ RKS +K E+ + L+++ +Y G + + ++++++ +D L
Sbjct: 50 DLANMSVRKSINKELDVESKMDCLSDAKMNYTKAG-NVIYTKITEEQMKLLDDQSRL--E 106
Query: 556 KESHSENSGTSTQDTVXKII 615
KE H E TS DT+ K I
Sbjct: 107 KEQHQEFKNTSLSDTIEKCI 126
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 28.7 bits (61), Expect = 6.8
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 277 PDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDP--QDYSALNERKSQDKHTENLIPNLT 450
P LG +++ K R+ P + H+DP + + +E + + +LT
Sbjct: 187 PALGKRLMDLSKAKAQ---RSSSIPERLSTHQDPGVDEGKSRSETELNSARKNSSEVHLT 243
Query: 451 NSHKSYGYTGIDKDES 498
+ H+S TG+DK+E+
Sbjct: 244 DLHRSQSLTGLDKNEA 259
>SB_14436| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 343 ENPSQRPEHRDPQDYSALNERKSQDKHTENLIPNLTN 453
++ +Q P HR PQ+YS ++S+ + + P L N
Sbjct: 85 DSRNQHPNHRIPQNYSLRTIKRSEIRGSTGSPPTLAN 121
>SB_42040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 271 NIPDLGDLIIERRNHKVPHDLRNVENPSQRPEHRDPQDYSALNE---RKSQDKHTENLIP 441
N PD + + E N+K H + E+ + +P+H D + Y N+ R ++ H N
Sbjct: 192 NKPDNLNKMSEHLNNKPDHLNKMSEHLNNKPDHLDNKPYHLNNKPDHRNNKPDHLNNKPE 251
Query: 442 NLTN 453
+L N
Sbjct: 252 HLNN 255
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,618,257
Number of Sequences: 59808
Number of extensions: 508012
Number of successful extensions: 1384
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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