Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N13
         (905 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   1.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.4  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    24   1.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   7.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    22   7.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +1

Query: 490 RFVDMRCLLMTKIMKPTRKQRNELNSHKMILMHYTIQCLVSSFIIINFLGLLVISG 657
           RFV +   L TK+ K    +   +   ++  +H+ +  LV+ F  I  LGLL++ G
Sbjct: 551 RFVTLNVQL-TKLTKNCATKAQSVVLGRICTLHHHLSKLVTRFNEIFGLGLLLMFG 605


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 329  STKITRCCNRKSKERLPN 382
            ST++  CC +K +E  PN
Sbjct: 1359 STELNLCCTKKKEELSPN 1376


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 329  STKITRCCNRKSKERLPN 382
            ST++  CC +K +E  PN
Sbjct: 1359 STELNLCCTKKKEELSPN 1376


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 329  STKITRCCNRKSKERLPN 382
            ST++  CC +K +E  PN
Sbjct: 1359 STELNLCCTKKKEELSPN 1376


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 329  STKITRCCNRKSKERLPN 382
            ST++  CC +K +E  PN
Sbjct: 1359 STELNLCCTKKKEELSPN 1376


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 667 YKRLWLSCLMFIYNNFLLKHVHNVKSLSF 753
           +K    SCLM +Y  FLL  + N+   SF
Sbjct: 168 FKTFLNSCLMDVYYEFLLISLINILIRSF 196


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -3

Query: 186 QNNQPFLKYGMWNENYL*NESNVMIKQN 103
           +NNQP      W+ N   N +N   K N
Sbjct: 365 RNNQPSTSNNRWHNNNGNNSNNHWRKNN 392


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = +1

Query: 157 SILEKWLVILKKWVGEN 207
           +++E W+ +L +W+ +N
Sbjct: 499 TLIETWMPLLPQWILDN 515


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 490 GHEFVLSNHVKIHLGWK 440
           G++ VL NH + H G K
Sbjct: 145 GYKHVLQNHERTHTGEK 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,849
Number of Sequences: 336
Number of extensions: 3988
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25237652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)