Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_N13
(905 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 7e-25
SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037) 48 8e-06
SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12) 48 1e-05
SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18) 47 2e-05
SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055) 44 1e-04
SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 0.001
SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 42 0.001
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 41 0.002
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 40 0.004
SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08) 38 0.008
SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19) 36 0.045
SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09) 34 0.18
SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.18
SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 33 0.24
SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 33 0.24
SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09) 33 0.24
SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08) 33 0.24
SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_41318| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.55
SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.73
SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 32 0.73
SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07) 32 0.73
SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07) 31 0.97
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 31 0.97
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21) 30 2.2
SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14) 30 3.0
SB_20928| Best HMM Match : NHL (HMM E-Value=0) 30 3.0
SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.0
SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034) 30 3.0
SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 30 3.0
SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07) 29 5.2
SB_45378| Best HMM Match : DUF843 (HMM E-Value=4.7) 29 6.8
SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.0
SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94) 28 9.0
SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23) 28 9.0
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 111 bits (267), Expect = 7e-25
Identities = 60/124 (48%), Positives = 73/124 (58%), Gaps = 6/124 (4%)
Frame = +3
Query: 171 MAGYFEEMGWRELGDGEQPNHLLHFARFLIDSGLDRTGAAEWPSLPPPASKEAVQKLQDV 350
MA YF+E + +PN LL A +G D G+ PPASKEAVQ L V
Sbjct: 1 MASYFDEHAATDRAS--EPNFLLELA----SAGFDDLGS-------PPASKEAVQALPAV 47
Query: 351 VI------ENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEMP 512
+ E CPICL + E GE K+MPC+H+FHP CIL WL+KTNSCP CRHE+P
Sbjct: 48 EVTDKHLKELSTSSCPICLGDYEKGESTKQMPCDHLFHPGCILPWLEKTNSCPVCRHELP 107
Query: 513 TDDE 524
TD+E
Sbjct: 108 TDNE 111
>SB_24514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 402
Score = 49.6 bits (113), Expect = 3e-06
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWL-DKTNSCPFCRHEMPT 515
C ICL + G+K++ +PC+H +H +C+ WL + +CP C+ + T
Sbjct: 301 CAICLDEYKEGDKLRILPCDHAYHCKCVDPWLTEGKRTCPVCKRPVET 348
>SB_698| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00037)
Length = 303
Score = 48.4 bits (110), Expect = 8e-06
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +3
Query: 321 KEAVQKLQDVVI-ENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTN-SCP 491
K + LQ V + E C IC++ G+ +K +PC H FH CI TWL T+ CP
Sbjct: 238 KHIIDGLQCVTVNEGIDDVCLICMEEYAVGDSMKYLPCRHNFHSACIRTWLTYTSCKCP 296
>SB_39497| Best HMM Match : zf-C3HC4 (HMM E-Value=5.1e-12)
Length = 558
Score = 47.6 bits (108), Expect = 1e-05
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 351 VIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFC 497
V E K C ICL+ + G+ ++ +PC H FH C+ WL +CP C
Sbjct: 207 VTEKNPK-CVICLEGFKNGQDLRIVPCRHEFHKECVDPWLLSNFTCPLC 254
>SB_26589| Best HMM Match : DUF477 (HMM E-Value=5.2e-18)
Length = 398
Score = 46.8 bits (106), Expect = 2e-05
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 363 QKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEMPTDDE 524
+ K CPICL+ + + C H + C+ WL+ +CP CR +D+
Sbjct: 258 ESKSCPICLEEFTPETPTRLLVCGHKYCEPCLSRWLENNTTCPICRKPTSRNDD 311
>SB_39560| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00055)
Length = 545
Score = 44.4 bits (100), Expect = 1e-04
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWL 470
C +C+ + EK++K+PCNH FH +CI WL
Sbjct: 361 CVVCMMDYTNREKLRKLPCNHDFHSKCIDRWL 392
>SB_23054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 41.5 bits (93), Expect = 0.001
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCP 491
C +CL + V+K+ C H+FH CI +WL + CP
Sbjct: 212 CGVCLSAYHPLQYVRKLQCRHVFHRDCIDSWLATQSICP 250
>SB_23934| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 617
Score = 41.5 bits (93), Expect = 0.001
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWL--DKT---NSCPFCR 500
C ICL + G + +PC H FH CI WL D T + CP CR
Sbjct: 560 CVICLDEFKPGCTLLGLPCGHSFHQHCIEVWLAGDNTAPHHCCPNCR 606
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 40.7 bits (91), Expect = 0.002
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 357 ENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWL 470
+N C +CL + E + V+ +PC H +H RCI WL
Sbjct: 287 QNDDARCVVCLVDFEEKQLVRTLPCLHEYHTRCIDKWL 324
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 39.5 bits (88), Expect = 0.004
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 318 SKEAVQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFC 497
+K+A ++ + V+E + C+ E + + C+H F C+ +WL K N+CP C
Sbjct: 350 TKKAEEEARKSVVEEMEDEFS-CIVCQELFIRATTLTCSHSFCEYCLQSWLRKRNTCPIC 408
Query: 498 R 500
R
Sbjct: 409 R 409
>SB_48731| Best HMM Match : zf-C3HC4 (HMM E-Value=6.5e-08)
Length = 688
Score = 38.3 bits (85), Expect = 0.008
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +3
Query: 378 PICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEMPTD 518
P C ++ +++ C HIF CI W D+ +CP CR + D
Sbjct: 484 PTC--QVKLAKQIMLRTCKHIFCEDCISLWFDREQTCPMCRARVAGD 528
>SB_4835| Best HMM Match : WWE (HMM E-Value=3.7e-19)
Length = 320
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/65 (29%), Positives = 33/65 (50%)
Frame = +3
Query: 324 EAVQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRH 503
E + LQ++ + + CP+CL+ +A V+ +PC H+F CI ++ C CR
Sbjct: 54 EEEEVLQNIFELDYQPDCPVCLQ--QASYPVR-LPCGHMFCFLCIKGVALRSRKCAICRQ 110
Query: 504 EMPTD 518
+ D
Sbjct: 111 PISPD 115
>SB_39138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 624
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Frame = +3
Query: 345 DVVIENQKKGCPICLKNLEAGEKVKKMPCN---HIFHPRCILTWLDKTNSCPFCRHEMPT 515
DV + C +CLK + A + ++PC+ IFH +C+ + + C FC T
Sbjct: 215 DVSLNPGPTNCAVCLKGIRARQP--RLPCHLCEQIFHLKCLGAEYELSRCCQFCAVRSTT 272
Query: 516 D 518
+
Sbjct: 273 E 273
>SB_39493| Best HMM Match : zf-TRAF (HMM E-Value=1.5e-09)
Length = 310
Score = 33.9 bits (74), Expect = 0.18
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEM-PTD 518
C IC LE + PC H + C+L WL N+CP R + P+D
Sbjct: 18 CCICRDVLE---EPLMAPCEHSYCSACVLGWLTHYNTCPEDRQSLWPSD 63
>SB_18658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 330 VQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEM 509
+++ D V ++ K C IC LE C H+F +C++ W+ + +CP ++
Sbjct: 44 IERFLDPVEDDFK--CGICFGVLE---DPLVTTCGHVFCSQCLVHWIAENGTCPLTCEQL 98
Query: 510 PTDD 521
DD
Sbjct: 99 AIDD 102
>SB_7987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 426 PCNHIFHPRCILTWLDKT---NSCPFCR 500
PC+H F CI WLD+T + CP C+
Sbjct: 174 PCDHYFCVLCICEWLDQTYNKSGCPVCK 201
>SB_57688| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 262
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 426 PCNHIFHPRCILTWLDKT---NSCPFCR 500
PC+H F CI WLD+T + CP C+
Sbjct: 48 PCDHYFCVLCICEWLDQTYNKSGCPVCK 75
>SB_30093| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 426 PCNHIFHPRCILTWLDKT---NSCPFCR 500
PC+H F CI WLD+T + CP C+
Sbjct: 174 PCDHYFCVLCICEWLDQTYNKSGCPVCK 201
>SB_21169| Best HMM Match : zf-CHY (HMM E-Value=2.1e-09)
Length = 2059
Score = 33.5 bits (73), Expect = 0.24
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWL-DKTNSCPFCRHEMPT 515
C ICL++ G +V + C+H H C + + + +CP CRH + T
Sbjct: 1985 CCICLEDAFTGCQV--LACSHKVHRDCAVAMVRNGVRNCPICRHPLYT 2030
>SB_14063| Best HMM Match : zf-C3HC4 (HMM E-Value=1.4e-08)
Length = 301
Score = 33.5 bits (73), Expect = 0.24
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +3
Query: 426 PCNHIFHPRCILTWLDKT---NSCPFCR 500
PC+H F CI WLD+T + CP C+
Sbjct: 174 PCDHYFCVLCICEWLDQTYNKSGCPVCK 201
>SB_6618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 32.7 bits (71), Expect = 0.42
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 345 DVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTW 467
D + N + CP+CL +L + C H+F CIL W
Sbjct: 93 DATMSNSAQ-CPVCLMSLSEQKLGTPNSCMHVFCLECILEW 132
>SB_41318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 32.3 bits (70), Expect = 0.55
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = +3
Query: 312 PASKEAVQKLQDVVIENQKKGCPICLKNLEAGEK----VKKMPC-NHIFHPRCILTWLD- 473
PA+K+ + +D+ ++ C IC + + ++PC + H +C W+
Sbjct: 9 PATKKFCELAKDIY-NSEGLACVICQDDRVTSNSSLTLLDRLPCCGQVCHQQCFWKWIHF 67
Query: 474 -KTN--SCPFCRHEMPT 515
+T +CP CRH P+
Sbjct: 68 HRTEDITCPHCRHAFPS 84
>SB_56644| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 858
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCR 500
CPICL+ + E ++ C H F CI + CP CR
Sbjct: 678 CPICLETITYPETLQG--CGHTFCRPCITEASKSSKLCPTCR 717
>SB_30107| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 911
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCR 500
CPICL+ + E ++ C H F CI + CP CR
Sbjct: 753 CPICLETITYPETLQG--CGHTFCRPCITEASKSSKLCPTCR 792
>SB_16806| Best HMM Match : CUE (HMM E-Value=1e-07)
Length = 322
Score = 31.9 bits (69), Expect = 0.73
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFH 446
C IC N+ K +K+PCNH+FH
Sbjct: 91 CAICWDNMG---KARKLPCNHLFH 111
>SB_36597| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-07)
Length = 346
Score = 31.5 bits (68), Expect = 0.97
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDK--TNSCPFCR-HEMPTD 518
C IC+ LE C H F C+ TWL + SCP CR H + D
Sbjct: 18 CNICVGVLE---NAITTICGHSFCESCLETWLSRPEVQSCPSCRSHVLSLD 65
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 31.5 bits (68), Expect = 0.97
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 426 PCNHIFHPRCILTWLDKTNSCPFCRHEM 509
PC H+F C+ LD CP CR +
Sbjct: 393 PCGHVFCRACLNRSLDHRPGCPICRSSL 420
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 30.3 bits (65), Expect = 2.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 429 CNHIFHPRCILTWLDKTNSCPFCRHEM 509
C H F CI++WL + CP C E+
Sbjct: 1382 CLHSFCRSCIVSWLQASYHCPVCDTEV 1408
>SB_30389| Best HMM Match : Helicase_C (HMM E-Value=3.3e-21)
Length = 380
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Frame = +3
Query: 315 ASKEAVQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTN---S 485
+++ + +L V+ + CPICL L+ + C H+F C+ ++
Sbjct: 45 STERLINQLLQVLSSGVSEECPICLDPLDDPSITR---CAHVFCTGCLTDVIENEGLAPR 101
Query: 486 CPFCR 500
CP CR
Sbjct: 102 CPMCR 106
>SB_24433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEMPT 515
CPIC + V+ +PC H+ CI L C FC+ + T
Sbjct: 430 CPICCAMRIS---VRFLPCRHVSCRSCITRHLMNNKECFFCKEVVDT 473
>SB_24608| Best HMM Match : zf-C3HC4 (HMM E-Value=2.9e-14)
Length = 390
Score = 29.9 bits (64), Expect = 3.0
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
Frame = +3
Query: 381 ICLKNLEAGEKVKKMPCN-----HIFHPRCILTWLDKT--NSCPFCR 500
IC AGE+ PC+ H C+LTW K N+C CR
Sbjct: 201 ICRICHSAGEEPLVTPCHCSGSAKFVHATCLLTWFKKAVKNTCELCR 247
>SB_20928| Best HMM Match : NHL (HMM E-Value=0)
Length = 795
Score = 29.9 bits (64), Expect = 3.0
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 6/53 (11%)
Frame = +3
Query: 381 ICLKNLEAGEKVKKMPCNHIFHPRCILTWLDK------TNSCPFCRHEMPTDD 521
+C K + A E K +PC H F +C+ L + +CP C + P D
Sbjct: 14 VCPKCMNAYENPKVLPCLHTFCSQCLSEELHRDCEGRLNVTCPKCLRDFPLRD 66
>SB_39478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 29.9 bits (64), Expect = 3.0
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +3
Query: 282 GAAEWPSLPPPASKEAVQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCIL 461
GAA S P AS + D N C ICL A + V M C H+F C+
Sbjct: 35 GAASSSSSEPTASHNPSE---DPNSANANFECNICLDT--ARDAVISM-CGHLFCWPCLH 88
Query: 462 TWLD---KTNSCPFCR 500
WL+ + CP C+
Sbjct: 89 RWLETRPNRSMCPVCK 104
>SB_38572| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0034)
Length = 671
Score = 29.9 bits (64), Expect = 3.0
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Frame = +3
Query: 408 EKVKK---MPCNHIFHPRCILTWLDKTNSCPFCRHEMPTD 518
EKVK+ P H+F C+ WL CP CR + D
Sbjct: 108 EKVKEPVVCPNQHVFCSPCLDLWLRTNRYCPTCRTPINQD 147
>SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013)
Length = 499
Score = 29.9 bits (64), Expect = 3.0
Identities = 11/31 (35%), Positives = 14/31 (45%)
Frame = +3
Query: 429 CNHIFHPRCILTWLDKTNSCPFCRHEMPTDD 521
C+ IF CI WL +C CR + D
Sbjct: 347 CDQIFCSGCITAWLRNAGACSSCRSVLEVSD 377
>SB_13966| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHE 506
C +C + L+ C H FH C + + N CP C E
Sbjct: 74 CNLCSRPLDL--PAVHFLCLHSFHQPCFEGYAENDNECPICTPE 115
>SB_25082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 29.1 bits (62), Expect = 5.2
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = +3
Query: 357 ENQKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNSCPFCRHEM 509
ENQ C ICL+N V + C H+ R T + + CP CR ++
Sbjct: 532 ENQGTQCVICLEN---QRNVVLLNCGHVCSCR---TCAQQIHQCPVCRGDI 576
>SB_16517| Best HMM Match : zf-C3HC4 (HMM E-Value=1e-07)
Length = 306
Score = 29.1 bits (62), Expect = 5.2
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Frame = +3
Query: 375 CPICLKNLEAGEKVKKMPCNHIFHPRCILTWLD---KTN-----SCPFCRHEMPTDD 521
C IC + LE + PC H F C+ TW++ + N SCP CR ++ D
Sbjct: 18 CGICAEVLE---RAVLTPCGHSFCGVCLETWMNAKLEENEKCPASCPSCRADLYQGD 71
>SB_45378| Best HMM Match : DUF843 (HMM E-Value=4.7)
Length = 228
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 251 ISHRFWLRSNWCSGVAKLTSACIERGSTKITRCCNRKSKERLPNMFEELR 400
+ HR +LR W + + + T C+ G +CC RK + L ++ ELR
Sbjct: 33 VEHRKYLRFKWKNTLFQYT--CLPNG----LKCCPRKFTKLLKPVYSELR 76
>SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1503
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +3
Query: 330 VQKLQDVVIENQKKGCPICLKNLEAGEKVKKM 425
++KL D ++N GCP+C + EA ++K +
Sbjct: 329 IKKLTDPSVKND--GCPLCHRRFEANAQIKTL 358
>SB_32455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = +1
Query: 490 RFVDMRCLLMTKIMKPTRKQRNELNSHKMILMHYTIQCLVSSFIIINFLGLLVISGDIN 666
R+ + +L+ + PT NE ++++L+H +Q V SF+ + GL++I+GD N
Sbjct: 130 RYPSVSMVLVAAVYHPTSCGANE---NQVLLLH--LQSNVESFLRQHPEGLILIAGDFN 183
>SB_43060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 372 GCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKT 479
G P+ + +E K C H FH C+ ++D T
Sbjct: 85 GSPMLFELIEDSHCFTKTECYHYFHCSCLARYIDHT 120
>SB_34605| Best HMM Match : APG6 (HMM E-Value=0.94)
Length = 1047
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 315 ASKEAVQKLQDVVIENQKKGCPICLKNLEAGEKVKKMPCN 434
ASK A + VV +N+ K IC + E +KV++MP N
Sbjct: 449 ASKLADTMIHYVVDQNRDKNRGICRQYDEVSDKVQEMPDN 488
>SB_8282| Best HMM Match : NHL (HMM E-Value=9.2e-23)
Length = 877
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = +3
Query: 363 QKKGCPICLKNLEAGEKVKKMPCNHIFHPRCILTWLDKTNS----CPFCRHEMPTD 518
Q+ C IC L + +PC H + RCI + S CP C E+P D
Sbjct: 141 QQLACGICHALLR---DARVLPCLHTYCRRCIEDIILHRQSVRAHCPSCNREIPLD 193
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,237,670
Number of Sequences: 59808
Number of extensions: 463829
Number of successful extensions: 1157
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1155
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2609867019
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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