Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP01_F_N01
         (867 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   7.2  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    22   7.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 593  NFDNSNLIWQHSGLVYGDWYSGPNGD 670
            NFD  +L W++      D   GP+ D
Sbjct: 1511 NFDGLDLDWEYPKCWQVDCKKGPDSD 1536



 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +2

Query: 593  NFDNSNLIWQHSGLVYGDWYSGPNGD 670
            NFD  +L W++      D   GP+ D
Sbjct: 2434 NFDGLDLDWEYPKCWQVDCNKGPDSD 2459



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 593  NFDNSNLIWQHSGLVYGDWYSGPNGDGS 676
            NFD  +L W++      D   GP  D S
Sbjct: 1936 NFDGLDLDWEYPKCWQVDCNKGPASDKS 1963


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/42 (23%), Positives = 19/42 (45%)
 Frame = -2

Query: 413 DFVMAKNDSNLVGCILRRSSSTRALISRLSSAATTLEPSWLM 288
           DF++   + + +   +R+      LI  L   ATT   +W +
Sbjct: 71  DFLLLALNISTILTTVRKQQQWAQLIQNLKVVATTKTKAWFL 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,022
Number of Sequences: 336
Number of extensions: 4340
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)