Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M22
(891 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 289 1e-78
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 289 1e-78
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 288 3e-78
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 288 3e-78
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 270 8e-73
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 270 8e-73
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 258 3e-69
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 140 1e-33
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 138 5e-33
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 136 1e-32
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 136 1e-32
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 136 2e-32
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 135 3e-32
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 134 6e-32
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 134 1e-31
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 130 1e-30
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 102 3e-22
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 102 4e-22
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.4
At5g18420.3 68418.m02170 expressed protein non-consensus GC dono... 30 1.8
At5g18420.2 68418.m02169 expressed protein non-consensus GC dono... 30 1.8
At5g18420.1 68418.m02168 expressed protein non-consensus GC dono... 30 1.8
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.4
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 4.1
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 29 4.1
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 9.6
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 9.6
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 9.6
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 9.6
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 289 bits (710), Expect = 1e-78
Identities = 125/139 (89%), Positives = 137/139 (98%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+L IERPTYTNLNRL+ +SS AS
Sbjct: 216 SLSIERPTYTNLNRLVSQVISSLTAS 241
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D + ++DNEAIYDICRR
Sbjct: 197 HTDVSILLDNEAIYDICRR 215
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 289 bits (710), Expect = 1e-78
Identities = 125/139 (89%), Positives = 137/139 (98%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+L IERPTYTNLNRL+ +SS AS
Sbjct: 216 SLSIERPTYTNLNRLVSQVISSLTAS 241
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D + ++DNEAIYDICRR
Sbjct: 197 HTDVSILLDNEAIYDICRR 215
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 288 bits (707), Expect = 3e-78
Identities = 125/139 (89%), Positives = 136/139 (97%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+L+IERPTYTNLNRL+ +SS AS
Sbjct: 216 SLNIERPTYTNLNRLVSQVISSLTAS 241
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D + ++DNEAIYDICRR
Sbjct: 197 HTDVSILLDNEAIYDICRR 215
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 288 bits (707), Expect = 3e-78
Identities = 125/139 (89%), Positives = 136/139 (97%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
RIRKLAD CTGLQGFL+F+
Sbjct: 121 RIRKLADNCTGLQGFLVFN 139
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 160 DYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+L+IERPTYTNLNRL+ +SS AS
Sbjct: 216 SLNIERPTYTNLNRLVSQVISSLTAS 241
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D + ++DNEAIYDICRR
Sbjct: 197 HTDVSILLDNEAIYDICRR 215
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 270 bits (662), Expect = 8e-73
Identities = 116/139 (83%), Positives = 131/139 (94%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+LDIERPTYTNLNRLI +SS S
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTS 241
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D A ++DNEAIYDICRR
Sbjct: 197 HTDVAVLLDNEAIYDICRR 215
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 270 bits (662), Expect = 8e-73
Identities = 116/139 (83%), Positives = 131/139 (94%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RVRKLADNCTGLQGFLVFN 139
Score = 58.0 bits (134), Expect = 8e-09
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
DYGKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 160 DYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+LDIERPTYTNLNRLI +SS S
Sbjct: 216 SLDIERPTYTNLNRLISQIISSLTTS 241
Score = 36.7 bits (81), Expect = 0.021
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D A ++DNEAIYDICRR
Sbjct: 197 HTDVAVLLDNEAIYDICRR 215
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 258 bits (633), Expect = 3e-69
Identities = 109/139 (78%), Positives = 129/139 (92%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+
Sbjct: 61 HVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLE 120
Query: 504 RIRKLADQCTGLQGFLIFH 560
R+RKLAD CTGLQGFL+F+
Sbjct: 121 RLRKLADNCTGLQGFLVFN 139
Score = 56.4 bits (130), Expect = 2e-08
Identities = 24/29 (82%), Positives = 27/29 (93%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNSI 708
D+GKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 160 DFGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 792 NLDIERPTYTNLNRLIGXXVSSXPAS 869
+LDIERPTY+NLNRLI +SS S
Sbjct: 216 SLDIERPTYSNLNRLISQTISSLTTS 241
Score = 35.1 bits (77), Expect = 0.063
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 734 HSDCAFMVDNEAIYDICRR 790
H+D ++DNEAIYDICRR
Sbjct: 197 HTDVVVLLDNEAIYDICRR 215
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 140 bits (338), Expect = 1e-33
Identities = 64/142 (45%), Positives = 90/142 (63%), Gaps = 3/142 (2%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 314
MRE + + GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEAS 55
Query: 315 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 494
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 56 CGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDA 115
Query: 495 VLDRIRKLADQCTGLQGFLIFH 560
VLD +RK A+ C LQGF + H
Sbjct: 116 VLDVVRKEAENCDCLQGFQVCH 137
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 138 bits (334), Expect = 5e-33
Identities = 62/139 (44%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGR 59
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 1e-32
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 136 bits (330), Expect = 1e-32
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 136 bits (328), Expect = 2e-32
Identities = 63/139 (45%), Positives = 87/139 (62%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 35.1 bits (77), Expect = 0.063
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + + F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 135 bits (327), Expect = 3e-32
Identities = 61/139 (43%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 60 YVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 119
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 120 VVRKEAENCDCLQGFQVCH 138
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 159 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 186
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 134 bits (325), Expect = 6e-32
Identities = 62/139 (44%), Positives = 88/139 (63%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 35.1 bits (77), Expect = 0.063
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + + F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 134 bits (323), Expect = 1e-31
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGR 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ C LQGF + H
Sbjct: 119 VVRKEAENCDCLQGFQVCH 137
Score = 35.9 bits (79), Expect = 0.036
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + L F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMLTFSVFPSPKVSDTVVEPYNA 185
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 130 bits (314), Expect = 1e-30
Identities = 61/139 (43%), Positives = 86/139 (61%)
Frame = +3
Query: 144 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 323
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGK 58
Query: 324 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 503
+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 59 YVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 504 RIRKLADQCTGLQGFLIFH 560
+RK A+ LQGF + H
Sbjct: 119 VVRKEAENSDCLQGFQVCH 137
Score = 35.1 bits (77), Expect = 0.063
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 622 DYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
+Y + + F+++P+P+VS VVEPYN+
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNA 185
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 102 bits (245), Expect = 3e-22
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 327 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 500
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 501 DRIRKLADQCTGLQGFLIFH 560
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 102 bits (244), Expect = 4e-22
Identities = 53/140 (37%), Positives = 81/140 (57%), Gaps = 2/140 (1%)
Frame = +3
Query: 147 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 326
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 327 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVL 500
+PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++
Sbjct: 61 IPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIM 119
Query: 501 DRIRKLADQCTGLQGFLIFH 560
D I + AD L+GF++ H
Sbjct: 120 DMIDREADGSDSLEGFVLCH 139
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 581 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 402
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 401 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 267
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At5g18420.3 68418.m02170 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 439
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 675 FHCR---RRALQLYPHHPHNPXSTLTVLSWSTMKPSMTSAAGNLDIERPTYTNLNRL 836
FHC R+ QL H+P LT L+ ST A GN+D+ + +NRL
Sbjct: 296 FHCGITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRL 352
>At5g18420.2 68418.m02169 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 442
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 675 FHCR---RRALQLYPHHPHNPXSTLTVLSWSTMKPSMTSAAGNLDIERPTYTNLNRL 836
FHC R+ QL H+P LT L+ ST A GN+D+ + +NRL
Sbjct: 299 FHCGITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRL 355
>At5g18420.1 68418.m02168 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 441
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 675 FHCR---RRALQLYPHHPHNPXSTLTVLSWSTMKPSMTSAAGNLDIERPTYTNLNRL 836
FHC R+ QL H+P LT L+ ST A GN+D+ + +NRL
Sbjct: 299 FHCGITPRKLPQLVEHNPQIAVEILTKLNNSTEINDYYEALGNMDMSLHSMEVVNRL 355
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +3
Query: 222 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 371
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 4.1
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -3
Query: 313 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 188
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 29.1 bits (62), Expect = 4.1
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Frame = -2
Query: 350 IDEDSTGYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDS 180
+ E G+ + SG + E + ++ D + H A DA+++ T +D
Sbjct: 748 VGEQILGWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDV 807
Query: 179 G-LANVYRDALTHF 141
G ANVYR LTHF
Sbjct: 808 GSAANVYRIVLTHF 821
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 9.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 210 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 377
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 378 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 210 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 377
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 378 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 9.6
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +3
Query: 210 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 377
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 378 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 506
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +1
Query: 616 PXDYGKKSKLEFAIYPAPQVSTAVVEPYNS 705
P D+ + F P VS A V+PYNS
Sbjct: 284 PIDFSSARGISFKFESNPSVSPACVKPYNS 313
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,051,074
Number of Sequences: 28952
Number of extensions: 410398
Number of successful extensions: 1332
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2090971320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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