Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP01_F_M13
(878 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33909| Best HMM Match : FH2 (HMM E-Value=0) 35 0.075
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 34 0.13
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 33 0.23
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 33 0.23
SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4) 33 0.40
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 32 0.70
SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42) 31 1.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 30 2.1
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 30 2.1
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 30 2.1
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 6.6
SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_33909| Best HMM Match : FH2 (HMM E-Value=0)
Length = 1063
Score = 35.1 bits (77), Expect = 0.075
Identities = 19/66 (28%), Positives = 21/66 (31%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP PPP +P + P PPP G G
Sbjct: 694 PPPPPPPPPPLLSGTLPMPPPPPPPPPGCAGLPPPPPSPQPGCAGLPPPPPPPPPGCAGL 753
Query: 805 LSXDPP 822
PP
Sbjct: 754 PPPPPP 759
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/57 (35%), Positives = 22/57 (38%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG 795
PPPPPPP + GG PPP P +P P PPP GG
Sbjct: 661 PPPPPPPPGGQ-----AGGAPPPPPPPLPGGAAPPPPPPIGGGAPPP---PPPGFGG 709
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPP + G PPP AP P P PPP
Sbjct: 326 PPPPPPSRSSQRPPPPSRGAPPPPSMGMAPPPVGGAAPPPP-PPPPVGGPPP 376
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP + + G PPP
Sbjct: 374 PPPPPPPIEGRPPSSLGNPPPPPPP 398
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/57 (29%), Positives = 18/57 (31%), Gaps = 4/57 (7%)
Frame = +1
Query: 625 PPPP----PPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPP PPP GG PPP P + P PPP
Sbjct: 338 PPPPSRGAPPPPSMGMAPPPVGGAAPPPPPPPPVGGPPPPPPPIEGRPPSSLGNPPP 394
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +1
Query: 673 GGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGXLSXDPP 822
GGG PPP P +P P PPP G G PP
Sbjct: 286 GGGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPP 335
Score = 31.9 bits (69), Expect = 0.70
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 673 GGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGXLSXDPP 822
GG PPP P P P PPP G GG PP
Sbjct: 287 GGAPVPPPPPADGSAPAPPPPPPPGGAPPPPPPPPPPPPGDGGAPPPPPP 336
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP G GG PPP
Sbjct: 314 PPPPPPPPPPPP----GDGGAPPPP 334
>SB_19987| Best HMM Match : MFMR (HMM E-Value=1.4)
Length = 330
Score = 32.7 bits (71), Expect = 0.40
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPPP G PPP P P P PPP
Sbjct: 280 PPPPPPPPSNTPGMFASSGFQPPPPPPTDFAPPPPPPEPTSELPPPP---PPP 329
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 32.3 bits (70), Expect = 0.53
Identities = 18/66 (27%), Positives = 20/66 (30%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP GG P P +P P PP G
Sbjct: 920 PPPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGG 979
Query: 805 LSXDPP 822
+ PP
Sbjct: 980 SAPPPP 985
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPP GG P P P APP GG
Sbjct: 921 PPPPPPGGNAPLPPPPPGGSAPSQPPPPGGNAPPPPPPPGGSAPPPGGGAPPLPPPPGGS 980
Query: 805 LSXDPP 822
PP
Sbjct: 981 APPPPP 986
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 31.9 bits (69), Expect = 0.70
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGGX 804
PPPPPPP + PPP P +P P PPP
Sbjct: 380 PPPPPPPPSPPPPPQP----PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALR 435
Query: 805 LSXDPP 822
L+ PP
Sbjct: 436 LACAPP 441
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/53 (28%), Positives = 15/53 (28%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPPP P P P P P PPP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPP 417
>SB_20734| Best HMM Match : Abi_HHR (HMM E-Value=3.59994e-42)
Length = 426
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXP--XKAPPPXXGGG 798
PPPPP P G PP AP +P P APPP
Sbjct: 245 PPPPPVPPPTIPSVPPGSETYVPPGSATYESMDSVNKAPVPPMTPPPAVVTAPPPAPPLP 304
Query: 799 GXLSXDPP 822
S PP
Sbjct: 305 NFTSPSPP 312
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +1
Query: 628 PPPPPPXKXKXXXK----XGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG 795
PPPPPP + + G PPP P +P P PPP G
Sbjct: 318 PPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPG 377
Query: 796 ----GGXLSXDPP 822
G ++ PP
Sbjct: 378 RRPPSGKINPPPP 390
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPP + PPP AP S P APPP
Sbjct: 194 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPP 245
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +1
Query: 625 PPP---PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG 795
PPP PPPP + K G PPP P S PPP
Sbjct: 141 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHS 200
Query: 796 GGXLSXDPP 822
+ PP
Sbjct: 201 RHGSAPPPP 209
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 634 PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPP K G PPP P S APPP
Sbjct: 263 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPP 312
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/73 (27%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +1
Query: 628 PPPPPPXKXKXXXK----XGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG 795
PPPPPP + + G PPP P +P P PPP G
Sbjct: 230 PPPPPPSRDQVPLPPPPLRGQIAPPPPPISKPPTSTRSAPPPPPGRAPQPLGGPPPPPPG 289
Query: 796 ----GGXLSXDPP 822
G ++ PP
Sbjct: 290 RRPPSGKINPPPP 302
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPP + PPP AP S P APPP
Sbjct: 106 PPPPPHSRHGSAPPPPERSSGPPPPPPGRGPSQRSLAPPPTGSSRPLPAPPP 157
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/69 (27%), Positives = 21/69 (30%), Gaps = 3/69 (4%)
Frame = +1
Query: 625 PPP---PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGG 795
PPP PPPP + K G PPP P S PPP
Sbjct: 53 PPPFGAPPPPDRGGQLAKKPSQGSFPPPPPMGKPPPPSGNKPTFGNSRTSTNGPPPPPHS 112
Query: 796 GGXLSXDPP 822
+ PP
Sbjct: 113 RHGSAPPPP 121
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 634 PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPP K G PPP P S APPP
Sbjct: 175 PPPPKNAPPPPKRGSSNPPPPPTRGPPSNSFTTQGPPLPPSRDQAPAPPP 224
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +1
Query: 628 PPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPP 783
PPPPPP GG PPP P SP P PP
Sbjct: 151 PPPPPPIAPAT------GGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPP 196
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP G PPP
Sbjct: 374 PPPPPPPTNGPPPPPPPTNGPPPPP 398
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPP 699
PPPPPPP G PPP
Sbjct: 384 PPPPPPPTNGPPPPPPPTNGPPPPP 408
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 640 GGGGGGXXXPPPPXGGGXXFLG 575
GGGGG PPPP G F G
Sbjct: 716 GGGGGHSGTPPPPEIGPKSFYG 737
>SB_5348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 28.7 bits (61), Expect = 6.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -2
Query: 643 GGGGGGGXXXPPPP 602
GGGG GG PPPP
Sbjct: 135 GGGGAGGTKRPPPP 148
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Frame = +1
Query: 625 PPP----PPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXG 792
PPP PP P + GG PP P P P PPP G
Sbjct: 429 PPPQHTGPPQPRPPHGMPQGGGPPQLPPNLPPPPGGMRGMPPPPMGMYPPPRGFPPPPFG 488
Query: 793 GGGXLSXDPP 822
PP
Sbjct: 489 PPPPFYRGPP 498
>SB_17864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 911
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = +1
Query: 625 PPPPPPPXKXKXXXKXGGGGXXPPPXXXXXXXXXXXXAPXKXFSPXPXKAPPPXXGGGG 801
PPP P + GG PPP AP P PPP G G
Sbjct: 593 PPPHPSGGYPQPSPPHGGHPHHPPPTGYPGGYPGTHTAPPAGGYPTGQHPPPPPAGYPG 651
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,861,012
Number of Sequences: 59808
Number of extensions: 166398
Number of successful extensions: 2592
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1481
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2502612210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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