Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_pT_E03
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 44 2e-04
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 35 0.055
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.29
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.39
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 32 0.51
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 32 0.51
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 1.6
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 4.8
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 6.3
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.3
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.3
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 28 8.3
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 64.1 bits (149), Expect = 1e-10
Identities = 42/138 (30%), Positives = 70/138 (50%)
Frame = -3
Query: 687 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 508
SY YL A +F+ GF K F K S + E L+K +RGG++ +
Sbjct: 214 SYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQDIKKPEK 273
Query: 507 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 328
D E G + ++ ALD +K + + + +H+ K+ D A++T +IE F++
Sbjct: 274 D-------EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFIEGNFLT 322
Query: 327 QQADTIRSLAGHTSDLKR 274
+Q + I+ LAGH ++LKR
Sbjct: 323 EQVEAIKELAGHLTNLKR 340
Score = 51.2 bits (117), Expect = 8e-07
Identities = 31/131 (23%), Positives = 66/131 (50%)
Frame = -3
Query: 666 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYT 487
A++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD---- 54
Query: 486 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIR 307
G+ + A+ AL +K++ + +H+ N D ++ ++E F+ +Q D+I+
Sbjct: 55 -HWGNGLMAMRDALYLEKEINHALLDLHQVADTN----RDPQVQDFLESNFLGEQVDSIK 109
Query: 306 SLAGHTSDLKR 274
+LA + S L+R
Sbjct: 110 TLANYVSTLQR 120
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/138 (26%), Positives = 69/138 (50%)
Frame = -3
Query: 687 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 508
SY Y+ A +F+ GF K F K S + E L K +RGG++ +K
Sbjct: 146 SYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD---IKR 202
Query: 507 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 328
+ ++ G A+ ALD +K + + + +H+ K+ D +++ ++E +++
Sbjct: 203 PERDDW----GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWLESHYLT 254
Query: 327 QQADTIRSLAGHTSDLKR 274
+Q + I+ LAGH ++LKR
Sbjct: 255 EQVEAIKELAGHLTNLKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 53.6 bits (123), Expect = 1e-07
Identities = 35/138 (25%), Positives = 70/138 (50%)
Frame = -3
Query: 687 SYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKG 508
SY Y+ A +F+ GF K F + S + E L K +RGG++ +K
Sbjct: 161 SYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVLQD---IKR 217
Query: 507 DKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVS 328
+ ++ G ++ + ALD +K + + + +H+ K+ D +++ ++E +++
Sbjct: 218 PERDDWGC--GQDV--IQAALDLEKHVNQALHDLHKVAEKHGD----SQMQDWLESHYLT 269
Query: 327 QQADTIRSLAGHTSDLKR 274
+Q + I+ LAGH ++LKR
Sbjct: 270 EQVEAIKELAGHMTNLKR 287
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/70 (30%), Positives = 43/70 (61%)
Frame = -3
Query: 483 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 304
E G + A+ ALD +K + + + + + KN D A+++ +IE+ F+++Q ++IR
Sbjct: 70 EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDFIEDHFLTEQVESIRE 125
Query: 303 LAGHTSDLKR 274
L+G+ + LK+
Sbjct: 126 LSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 43.6 bits (98), Expect = 2e-04
Identities = 22/76 (28%), Positives = 45/76 (59%)
Frame = -3
Query: 477 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 298
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F+++Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 297 GHTSDLKRFITENNGK 250
+ S L+R E G+
Sbjct: 64 NYVSTLRRLGGEGLGE 79
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 35.1 bits (77), Expect = 0.055
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = -1
Query: 443 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 264
++++SL +S SLK + ++ SL TSR+ K R + + +P+TSS S P
Sbjct: 105 SQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTD--RKKSRNTSPKRSPKTSSKSSP 162
Query: 263 RTTGKTCL 240
+T+ KT L
Sbjct: 163 KTSPKTSL 170
Score = 34.3 bits (75), Expect = 0.096
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = -1
Query: 443 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 264
+R++SL R +S SLKT+ + +S NTS + S K + + +P+TS +
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRS--PKTSSKSSPKTSPKTSLKTSS 174
Query: 263 RTTGKTCLS 237
+T+ KT L+
Sbjct: 175 KTSPKTSLN 183
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.29
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 684 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 586
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 32.3 bits (70), Expect = 0.39
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Frame = -3
Query: 402 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRFITENNG 253
+EVT N+ L D +TQ E EE+V + IR + T +KR+IT++NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -1
Query: 443 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 264
+R++S S S KT+ + ++SL TS + S P R +P+TSS + P
Sbjct: 333 SRKTSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISP------RTSPKTSSKTSP 386
Query: 263 RTTGKTCLS 237
+T+ KT L+
Sbjct: 387 KTSLKTSLN 395
Score = 29.9 bits (64), Expect = 2.1
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -1
Query: 437 RSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPR--TSSGS*P 264
++SL +S SLKT+ ++M SL TSRR S + P + + + R TS + P
Sbjct: 154 KTSLKTSLKASLKTSLKTSLKTSMKTSLKTSRRTSLKTCPKTSLETSMKTRLNTSQKTSP 213
Query: 263 RTT 255
T+
Sbjct: 214 ETS 216
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 31.9 bits (69), Expect = 0.51
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -1
Query: 443 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 264
+RR+SL R +S S KT ++ S TS + P +S+ +P+TS S P
Sbjct: 89 SRRTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEIGPRTSPK--TSSKTSPKTSPKSSP 146
Query: 263 RTTGKT 246
+T+ KT
Sbjct: 147 KTSPKT 152
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 355 SDLSIVEEVAVFSDFPVDEENPLGKLLLRVQ 447
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -3
Query: 483 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 304
E+G ++ L+KAL +++LA +I + E T NS ++ E T E +S+ +
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDTVRELETEISKLEEEKAK 515
Query: 303 LAGHTSDLKRFI-TENNGK 250
LA + K + ++++GK
Sbjct: 516 LATALATAKTAVHSDSDGK 534
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -1
Query: 452 KPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 333
KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 1005 KPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 600 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 505
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 474 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 346
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 58 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 103
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -3
Query: 474 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 346
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 54 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 99
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -1
Query: 410 SSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKT 246
+S S KT+ + ++SL T+ + S K R + +P+TS + P+T+ KT
Sbjct: 5 TSPKTSPKTSQKTMRIKSLKTTPKTS--PKTRRKTGRKTSPKTSPKTSPKTSPKT 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,294,964
Number of Sequences: 59808
Number of extensions: 359572
Number of successful extensions: 852
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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