Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_H13
(810 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-10
SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05) 32 0.48
SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0) 29 3.4
SB_57324| Best HMM Match : ig (HMM E-Value=1e-26) 29 4.5
SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038) 29 4.5
SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_28711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.7e-05) 29 4.5
SB_4582| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.7) 29 4.5
SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74) 29 5.9
SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.9
>SB_25| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 41.9 bits (94), Expect(2) = 2e-10
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 690 ENIDENPFVEYFMSNCLFEPLIQLLCTTTERQQXGYDVVM 809
+N+ +N +EY M N +FE ++Q+L RQQ GY+ ++
Sbjct: 198 DNVSQNTVIEYIMINSIFEAIMQILADPIARQQHGYEAML 237
Score = 41.5 bits (93), Expect(2) = 2e-10
Identities = 21/79 (26%), Positives = 40/79 (50%)
Frame = +3
Query: 351 LEAEIHKLSTEQLINMKESMNILVEQCIEMLRQDHHIRXXXXXXXXXXXXITMYQRLEQD 530
LE I +++ E+++ +KE++N L QC L DH I+ +Y + D
Sbjct: 116 LEDRIAQMTLEEIMAVKENINQLFAQCCIALHGDHQIKLVNALQTLCALVQAIYGKKMSD 175
Query: 531 SNINIKTIMIGQENADTKM 587
++ I+IG ++A+ +M
Sbjct: 176 HGYDVINILIGFDSAEAQM 194
>SB_42797| Best HMM Match : Peptidase_A16_N (HMM E-Value=2e-05)
Length = 668
Score = 32.3 bits (70), Expect = 0.48
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVLKLLLIIATGIENID 701
SN+N+ + N ++++VKL +E I +VHESLK ++ ++ IE ID
Sbjct: 590 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIVFTVIERIDRIERID 648
>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
Length = 663
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +3
Query: 246 KVVQIYESFFRGEDLTTDNPTFWDEFFLLKPKIPQLEAEIHKLSTEQLINMKESMNILVE 425
K+VQ+ E+FFR +F+ + KP+ ++ L + N K ++ ++
Sbjct: 296 KMVQLAEAFFRSIGFEKLPGSFYSKSMFEKPEDREVLCHAAALDFFEK-NSKGEKDVRIK 354
Query: 426 QCIEMLRQD 452
QC E+ QD
Sbjct: 355 QCTEITHQD 363
>SB_57324| Best HMM Match : ig (HMM E-Value=1e-26)
Length = 947
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVL 659
SN+N+ + N ++++VKL +E I +VHESLK ++
Sbjct: 175 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIV 219
>SB_51966| Best HMM Match : zf-CCHC (HMM E-Value=0.00038)
Length = 447
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVL 659
SN+N+ + N ++++VKL +E I +VHESLK ++
Sbjct: 314 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIV 358
>SB_49865| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 627
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVL 659
SN+N+ + N ++++VKL +E I +VHESLK ++
Sbjct: 294 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIV 338
>SB_28711| Best HMM Match : Peptidase_A16_N (HMM E-Value=3.7e-05)
Length = 411
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVL 659
SN+N+ + N ++++VKL +E I +VHESLK ++
Sbjct: 343 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIV 387
>SB_4582| Best HMM Match : Sas10_Utp3 (HMM E-Value=0.7)
Length = 420
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 531 SNINIKTIMIGQENADTKMVKL--FEQCSIILSGDVHESLKSMVL 659
SN+N+ + N ++++VKL +E I +VHESLK ++
Sbjct: 185 SNVNLIGCDLSSSNVESEVVKLWDYETLGIREENEVHESLKDGIV 229
>SB_41261| Best HMM Match : Metallothio_11 (HMM E-Value=0.74)
Length = 328
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 320 ILSSEAKNTTAGSRNTQTVHRTADKHERKYEYIG*TVYRNVETRPSYKVALCFTNIKC 493
++S A + +R T V+ T+D E K+ + R ++P + A C+ N+ C
Sbjct: 169 LMSDTANDPVKKNRTTYAVNLTSDSIEMKHSRCLDSSPRRSSSKPGPRRADCYVNLCC 226
>SB_24840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 320 ILSSEAKNTTAGSRNTQTVHRTADKHERKYEYIG*TVYRNVETRPSYKVALCFTNIKC 493
++S A + +R T V+ T+D E K+ + R ++P + A C+ N+ C
Sbjct: 169 LMSDTANDPVKKNRTTYAVNLTSDSIEMKHSRCLDSSPRRSSSKPGPRRADCYVNLCC 226
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,688,349
Number of Sequences: 59808
Number of extensions: 415480
Number of successful extensions: 961
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 953
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2251677692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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