Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G07
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37033| Best HMM Match : Annexin (HMM E-Value=0) 140 2e-33
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 114 7e-26
SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19) 95 7e-20
SB_47771| Best HMM Match : Annexin (HMM E-Value=0) 88 9e-18
SB_7681| Best HMM Match : Annexin (HMM E-Value=0) 60 1e-09
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 60 2e-09
SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19) 31 1.4
SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08) 29 3.2
SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11) 29 4.2
SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24) 29 5.5
SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1) 28 7.3
SB_7925| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13) 28 9.7
>SB_37033| Best HMM Match : Annexin (HMM E-Value=0)
Length = 287
Score = 140 bits (338), Expect = 2e-33
Identities = 81/191 (42%), Positives = 108/191 (56%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 330
TL A G D KA++ +LC R QR I+ +KT +G+DLI +LKSE+ G E+ ++
Sbjct: 92 TLDIASNKPGCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVI 151
Query: 331 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 510
ALMTP + A L A+ G+GTDE +IE+L T +N I I Y L+ + LE D+
Sbjct: 152 ALMTPPAEYDATLLRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEKDIA 211
Query: 511 GDTSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRS 690
GDTSG FK+ +SLC A +G +WGTDES FNSIL +RS
Sbjct: 212 GDTSGKFKKFLISLCNALYKAGEG-------------------RWGTDESKFNSILASRS 252
Query: 691 YQQLRQIFAEY 723
+ QLR F EY
Sbjct: 253 FDQLRATFNEY 263
Score = 50.4 bits (115), Expect = 2e-06
Identities = 32/128 (25%), Positives = 60/128 (46%)
Frame = +1
Query: 394 GTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDE 573
G D +A++ +LC+ +N + IS Y+ ++G+ L DLK + G+F+ ++L +
Sbjct: 101 GCDNKALMYLLCSRTNSQRQRISLEYKTMFGRDLIKDLKSEVGGYFEDTVIALMTPPAEY 160
Query: 574 NQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQLRQIFAEYEALTGKDIED 753
+ + GTDE++ +L TR+ ++ I Y L +D+E
Sbjct: 161 DATL------------LRKAIKGLGTDEAVLIEVLTTRTNDEIIAIRNAYNTLFSRDLEK 208
Query: 754 SIXKEFSG 777
I + SG
Sbjct: 209 DIAGDTSG 216
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 114 bits (275), Expect = 7e-26
Identities = 57/181 (31%), Positives = 96/181 (53%), Gaps = 1/181 (0%)
Frame = +1
Query: 238 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAII 417
++ + + Y KDL+ +L ++ ++ + +L+ P + L+ A+ G+GT E +I
Sbjct: 477 KLNDEYNKRYKKDLVEQLDGKVAIDVHEAVTSLLLPATKADVRSLYYAMKGLGTKEAQLI 536
Query: 418 EILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSLCMANRDENQGIDXXX 597
EILCT SN I+ I Y + YG+SL D+K +TSG F+ L +L +RDE+ ++
Sbjct: 537 EILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLETLLKGSRDESTDVNKEL 596
Query: 598 XXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIXKEFS 774
+WGTDE F +IL RS ++ + AEY+ L+ G + D++ E
Sbjct: 597 VTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMK 656
Query: 775 G 777
G
Sbjct: 657 G 657
Score = 64.9 bits (151), Expect = 7e-11
Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 330
+L AMKG GT E +I++LC R + EI + + YG+ L ++KSE +G+ EN++
Sbjct: 520 SLYYAMKGLGTKEAQLIEILCTRSNAEIQEIKQEYNKKYGRSLTDDMKSETSGDFENLLE 579
Query: 331 ALM-------TPL-PHFYAKELHDAVS-GI---GTDEEAIIEILCTLSNYGIRTISAFYE 474
L+ T + K+ VS G+ GTDE+ I IL S+ ++ + A Y+
Sbjct: 580 TLLKGSRDESTDVNKELVTKDAAALVSAGVARWGTDEDQFITILSQRSSAHVQAVLAEYK 639
Query: 475 QLY-GKSLESDLKGDTSGHFKRLCVSLCMANRDENQ 579
L G SL ++ + G + + L +D +Q
Sbjct: 640 TLSGGVSLADTVRDEMKGDLRDALLVLISYGQDPSQ 675
Score = 49.2 bits (112), Expect = 4e-06
Identities = 49/217 (22%), Positives = 87/217 (40%), Gaps = 19/217 (8%)
Frame = +1
Query: 175 FGTDEKAIIDVLCRRGIVQRLEIAETFKT-NYGKDLISELKSELTGNLENVIVALMT--P 345
+GTDE I +L +R + +KT + G L ++ E+ G+L + ++ L++
Sbjct: 612 WGTDEDQFITILSQRSSAHVQAVLAEYKTLSGGVSLADTVRDEMKGDLRDALLVLISYGQ 671
Query: 346 LPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 525
P A + +A G D + I+ + + A Y Y +++ S
Sbjct: 672 DPSQAAADKLNAALHDG-DTVTVARIVAGTQQGPLADLEASYNATYNPKAYFEVEKRCSE 730
Query: 526 HFKRLCVSLCM---------------ANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDES 660
K++ ++ A RDE+ ID +WGT+E
Sbjct: 731 DLKKIILNRLKDKTEDKKIKKSKDVKATRDESTKIDEDLVTQDAAALVSAGVARWGTEED 790
Query: 661 IFNSILITRSYQQLRQIFAEYEALT-GKDIEDSIXKE 768
F +IL RS ++ + AEY L+ G + D+I E
Sbjct: 791 QFITILTQRSSAHVQAVLAEYRTLSGGVTLADTIRDE 827
Score = 48.0 bits (109), Expect = 8e-06
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 16/196 (8%)
Frame = +1
Query: 184 DEKAIIDVLCRRGIVQRL--EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHF 357
D+K I +++ + + ++ ++ + +K Y +DL L +L +L + A++ P
Sbjct: 17 DKKKIKELVMKAAVDKKKLKKLGDDYKKQYKQDLTDALDGKLEEDLHEAVAAMLLPGNEA 76
Query: 358 YAKELHDAVSGIGT-DEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDL--------K 510
A+ L+ A+ I + EE + C+L + S +E L + + K
Sbjct: 77 DARTLYFAMKNIDSIKEEYQKKYGCSLEDDVKEETSGDFEDLLVALMSVRISTLIYHLIK 136
Query: 511 GDTSGHFKRLC-----VSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSI 675
+ F C + + RDE+ I+ +WGTDE F I
Sbjct: 137 TPSKPIFIIKCKLTVFLWVYQGKRDESDEINEDLAHKDAEALIEAGIKKWGTDEDCFIEI 196
Query: 676 LITRSYQQLRQIFAEY 723
TRSY QL+ +F EY
Sbjct: 197 FTTRSYPQLQAMFPEY 212
>SB_35578| Best HMM Match : Annexin (HMM E-Value=1e-19)
Length = 146
Score = 94.7 bits (225), Expect = 7e-20
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +1
Query: 181 TDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 360
T+E +I +L R QR+EI + +KT YGKDL+++LKSEL+GNLE ++A+M P +
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAMMEPSVLYD 61
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 453
AK L + G GTDEE +I+ILCT SN G R
Sbjct: 62 AKCLRRGMRGAGTDEETLIDILCTRSNQGNR 92
Score = 48.8 bits (111), Expect(2) = 1e-10
Identities = 23/62 (37%), Positives = 29/62 (46%)
Frame = +1
Query: 538 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQLRQIFA 717
LC NRD N +D +WGTDES FN +L +RS+ QL+ F
Sbjct: 83 LCTRSNQGNRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQATFN 142
Query: 718 EY 723
EY
Sbjct: 143 EY 144
Score = 35.1 bits (77), Expect(2) = 1e-10
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 397 TDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRLCVSL 552
T+E +I IL SN I Y+ +YGK L +DLK + SG+ + +++
Sbjct: 2 TNEAELIGILANRSNAQRVEIRKRYKTMYGKDLMNDLKSELSGNLEECLLAM 53
Score = 35.1 bits (77), Expect = 0.064
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRR 219
LR+ M+G GTDE+ +ID+LC R
Sbjct: 65 LRRGMRGAGTDEETLIDILCTR 86
>SB_47771| Best HMM Match : Annexin (HMM E-Value=0)
Length = 529
Score = 87.8 bits (208), Expect = 9e-18
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 333
L+KAMKGFG+DE+AII+VL + QRL IA++FK Y KDL++ELKSEL+G E+ IVA
Sbjct: 311 LKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDAIVA 370
Query: 334 LMTPLPHFYAKELHDAVSGIGTDEEAII 417
L+ P A LH A+ + I+
Sbjct: 371 LLLPPEQLDANALHGAMQAKRVSADEIV 398
Score = 66.9 bits (156), Expect = 2e-11
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 16/155 (10%)
Frame = +1
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 540
A++L A+ G G+DEEAIIE+L + + I+ ++Q Y K L ++LK + SG F+
Sbjct: 308 AEKLKKAMKGFGSDEEAIIEVLQSCNLEQRLAIAQSFKQQYDKDLVNELKSELSGKFEDA 367
Query: 541 CVSLCM------ANR----------DENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNS 672
V+L + AN ++ ++ +WGTDES+F
Sbjct: 368 IVALLLPPEQLDANALHGAMQAKRVSADEIVNEDQAYEDAKNLYEAGEKKWGTDESVFTK 427
Query: 673 ILITRSYQQLRQIFAEYEALTGKDIEDSIXKEFSG 777
IL RS QLR ++ Y+ + DI ++I E +G
Sbjct: 428 ILTCRSDLQLRALYQAYQHVAKCDILETIDDELTG 462
Score = 53.6 bits (123), Expect = 2e-07
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVL-CRRGIVQRLE-IAETFKTNYGKDLISELKSELTGNLENVI 327
L+KA++ +D+K +V+ C +L+ +++ + Y KDL+ +L ++ ++ +
Sbjct: 52 LQKAIEK--SDKKTATEVIVCNASDEGKLKKLSDEYNKRYEKDLVEQLDGKVADDVHEAV 109
Query: 328 VALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYG 447
+L+ P + L+ A+ G+GT E +IE LCT SN G
Sbjct: 110 TSLLLPATQADVRSLYYAMKGLGTKEAQLIETLCTRSNTG 149
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRR 219
+L AMKG GT E +I+ LC R
Sbjct: 123 SLYYAMKGLGTKEAQLIETLCTR 145
>SB_7681| Best HMM Match : Annexin (HMM E-Value=0)
Length = 426
Score = 60.5 bits (140), Expect = 1e-09
Identities = 36/132 (27%), Positives = 66/132 (50%)
Frame = +1
Query: 169 KGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL 348
K +GTDE VL R Q + +D+++ + E++G+L+ + P
Sbjct: 27 KKWGTDESRFNVVLASRSFPQLQATFNEYIKISQRDIMNSIDREMSGDLKAGLQCARNPA 86
Query: 349 PHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 528
+F A L ++ G GTD+ +I ++ + S + I A + Q Y K++ ++GD SG
Sbjct: 87 EYF-ADRLWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGD 145
Query: 529 FKRLCVSLCMAN 564
+K+L ++L N
Sbjct: 146 YKKLLMALPSPN 157
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +1
Query: 562 NRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQLRQIFAEYEALTGK 741
NRD N +D +WGTDES FN +L +RS+ QL+ F EY ++ +
Sbjct: 2 NRDTNMTVDMAKATKEAQDLYKAGEKKWGTDESRFNVVLASRSFPQLQATFNEYIKISQR 61
Query: 742 DIEDSIXKEFSG 777
DI +SI +E SG
Sbjct: 62 DIMNSIDREMSG 73
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/64 (32%), Positives = 38/64 (59%)
Frame = +1
Query: 154 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 333
L K+MKG GTD+ +I V+ R V +EI +F Y K + ++ + +G+ + +++A
Sbjct: 93 LWKSMKGAGTDDSLLIRVVVSRSEVDLVEIKASFLQKYHKTVYKMIEGDCSGDYKKLLMA 152
Query: 334 LMTP 345
L +P
Sbjct: 153 LPSP 156
>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
Length = 803
Score = 60.1 bits (139), Expect = 2e-09
Identities = 34/102 (33%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
Frame = +1
Query: 154 LRKAMKGFGTD--EKAIIDVLCR----RGIVQRLEIAETFKTNYGKDLISELKSELTGNL 315
L +A++G ++ + AIID+L R R + RL+ + +K + +D++ L+ L ++
Sbjct: 353 LHQAIQGMVSEGNKDAIIDILARNCDERSKLDRLK--DKYKDQHDQDILEALQPHLGDDV 410
Query: 316 ENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSN 441
++ + + + F AK LHDA+ G+GTDE+ +IEI+CT N
Sbjct: 411 KDPVESFFSSSSAFDAKCLHDAIKGLGTDEDLLIEIICTRKN 452
Score = 58.8 bits (136), Expect = 5e-09
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Frame = +1
Query: 184 DEKAIIDVLCRRGIVQRL-EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFY 360
D++ I+ +L R ++ ++ + +K Y KDL ELKS L + + +L
Sbjct: 21 DKERIMGILGRTSEKDKMNKLEDKYKDLYKKDLNEELKSVLDEEIMKALESLAEEAAMKD 80
Query: 361 AKELHDAVSGIGTDEEAIIEILCTLSNYGIR 453
AK L++A G GTDE+A+I ILCT SN G R
Sbjct: 81 AKTLYEATKGFGTDEDALISILCTRSNKGQR 111
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/140 (26%), Positives = 56/140 (40%)
Frame = +1
Query: 358 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 537
Y K+L++ + + DEE + + ++ YE G + D
Sbjct: 49 YKKDLNEELKSV-LDEEIMKALESLAEEAAMKDAKTLYEATKGFGTDEDAL------ISI 101
Query: 538 LCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWGTDESIFNSILITRSYQQLRQIFA 717
LC RDE++ D WGTDE F + RS+ Q+ + A
Sbjct: 102 LCTRSNKGQRDESKEADIHLAKKDAKDLMEAGVASWGTDEGAFIRVFTQRSFTQISAMCA 161
Query: 718 EYEALTGKDIEDSIXKEFSG 777
EY+ LT +IE+SI KE G
Sbjct: 162 EYKKLTKVEIEESIDKEMDG 181
Score = 35.9 bits (79), Expect = 0.037
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1
Query: 151 TLRKAMKGFGTDEKAIIDVLCRR 219
TL +A KGFGTDE A+I +LC R
Sbjct: 83 TLYEATKGFGTDEDALISILCTR 105
>SB_15593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1593
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 325 IVALMTPLPHFYAK-ELHDAVSGIGTDEEA---IIEILCTLSNYGIRTISAFYEQLYGKS 492
+V + +F K E+HDA+ G T+ ++ +++ L ++YG + S + +L G S
Sbjct: 537 VVTVFNMTSNFTTKSEVHDAIDGAVTENDSYRKVLDFLKEWASYGNKEYSEAWIRLDGIS 596
Query: 493 LESDLKGDTSGHFKRLC 543
+E+ LKG +S H R C
Sbjct: 597 VEA-LKGKSSWH--RFC 610
>SB_49312| Best HMM Match : Mucin (HMM E-Value=0.19)
Length = 925
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/70 (27%), Positives = 28/70 (40%)
Frame = +2
Query: 284 ANSRVNSPATWKMSSSH**LPCPTSTLRSSTMLSQELEPTKKPSSRSCARFPTMVSVPYP 463
A N P T S +P T+ + ++ L+PTK S + PT+ +P
Sbjct: 206 AKGTYNFPLTKSTKSQPATIPVSTTKFPTEAQTTEYLQPTKTSLSSTAPPHPTVYRLPST 265
Query: 464 HFTNNCTARA 493
NN T A
Sbjct: 266 ESINNFTDTA 275
>SB_12472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 348 APLLR*GAPRCCLRNWNRRRSHHRDP 425
+P L PRCC +N N R H DP
Sbjct: 138 SPFLYEPGPRCCNQNMNNRSKCHADP 163
>SB_23071| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +1
Query: 217 RGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVS--- 387
R +V RL+I +T + K+ L I++L+T Y + L +A+
Sbjct: 81 RNLVSRLKITFAGETLQDTNRYDVFKTYEELYLSKTILSLLTDHGELYPRALSEALLFEI 140
Query: 388 GIGTDEEAIIEILCTLSNYGIRTISAFYEQL 480
+ T ++ ++ T +YGI+ + YE L
Sbjct: 141 TLATVDQVVVGSDATKLSYGIKNLELEYENL 171
>SB_20180| Best HMM Match : Aldedh (HMM E-Value=5.3e-08)
Length = 266
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/118 (21%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Frame = +1
Query: 196 IIDVLCRRGIVQRLEIAETFKTNYGKD--LISELKSELTGNLENVIVALMTPLPHFYAKE 369
++ +L + I + L+ ++NYG+ L S+ S L +++++ + + +
Sbjct: 149 VVPILSFKDIQEPLDYVS--ESNYGQQVSLFSKNPSSLAPLIDSLVNQVCRVNINTKCQR 206
Query: 370 LHDAVSGIGTDEEAI--IEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 537
D + +G + A+ + + L + IRT+ AF + SDL + S +F R
Sbjct: 207 GPDVLPFVGRKDSAVSTLSVYDALRTFSIRTLVAFRSNAINDKILSDLLENESSNFLR 264
>SB_5137| Best HMM Match : Phage_integrase (HMM E-Value=0.11)
Length = 834
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 5/104 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 524 IENACRAGPIANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 583
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSL 495
K + + VSG GTD + + I T+S ISA L+ K++
Sbjct: 584 KYMRNKVSGAGTDPDEKVFISFTVSEMTSFMISAQLNSLWQKAV 627
>SB_25942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1062
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 435 IENACRAGPLPNMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 494
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 495 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 539
>SB_18204| Best HMM Match : Phage_integr_N (HMM E-Value=0.24)
Length = 285
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +1
Query: 199 IDVLCRRGIVQRLEIAETFK-TNYGKDLISELKSELTGNLENVIVALMTPLPHF----YA 363
I+ CR G + + + + + T G ++I + T +++P Y
Sbjct: 171 IENACRAGPLANMTLRDLDRATKDGDEMIVTILKHKTSASAGPAHVVLSPTVFTWLKAYV 230
Query: 364 KELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
K + + VSG GTD + + I T S ISA + K++E
Sbjct: 231 KYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 275
>SB_31195| Best HMM Match : PspA_IM30 (HMM E-Value=1)
Length = 345
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 358 YAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLE 498
Y K + + VSG GTD + + I T S ISA + K++E
Sbjct: 47 YVKYMRNKVSGAGTDPDEKVFISFTASEMTSSMISAQLNSFWQKAVE 93
>SB_7925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 605 PMLKHWPPLVKVNGEPTNQSSTPSLSLAPIS 697
P+ H+P + + P N+S PS+ PIS
Sbjct: 386 PLTPHFPQIPGMYRRPLNESKLPSIPAQPIS 416
>SB_55125| Best HMM Match : zf-C2HC (HMM E-Value=1.5e-13)
Length = 405
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 651 RRINLQLHPYHSLLSAAETDLRRVRSFD-RKRH*GLDQXRILW 776
R +NL L P H + +D ++ + D K GLD+ +LW
Sbjct: 12 RDVNLTLSPAHMMAKGRNSDKQKEKDKDAEKDKDGLDRKYLLW 54
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,345,229
Number of Sequences: 59808
Number of extensions: 452013
Number of successful extensions: 1493
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1309
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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