Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P02_F_G05
(725 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64320.1 68414.m07289 myosin heavy chain-related similar to m... 37 0.012
At2g18300.2 68415.m02134 basic helix-loop-helix (bHLH) family pr... 34 0.083
At2g18300.1 68415.m02133 basic helix-loop-helix (bHLH) family pr... 34 0.083
At3g02930.1 68416.m00288 expressed protein ; expression support... 33 0.19
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 33 0.25
At4g38070.1 68417.m05377 bHLH family protein contains Pfam profi... 32 0.34
At4g27180.1 68417.m03904 kinesin-like protein B (KATB) 32 0.45
At3g61710.2 68416.m06916 autophagy protein Apg6 family contains ... 32 0.45
At3g61710.1 68416.m06915 autophagy protein Apg6 family contains ... 32 0.45
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 31 0.78
At3g28770.1 68416.m03591 expressed protein 31 1.0
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 31 1.0
At5g55860.1 68418.m06963 expressed protein contains Pfam profile... 30 1.8
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 30 1.8
At2g46180.1 68415.m05742 intracellular protein transport protein... 30 1.8
At1g67230.1 68414.m07652 expressed protein 30 1.8
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 29 2.4
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 4.1
At5g61070.1 68418.m07663 histone deacetylase family protein (HDA... 28 5.5
At5g03500.1 68418.m00306 transcriptional co-activator-related lo... 28 5.5
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 28 5.5
At4g15430.1 68417.m02360 early-responsive to dehydration protein... 28 5.5
At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identica... 28 5.5
At3g52950.1 68416.m05837 CBS domain-containing protein / octicos... 28 5.5
At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing ... 28 5.5
At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibit... 28 7.2
At2g34780.1 68415.m04270 expressed protein 28 7.2
At1g71360.1 68414.m08237 expressed protein low similarity to PIR... 28 7.2
At1g63300.1 68414.m07156 expressed protein similar to Intracellu... 28 7.2
At3g04630.2 68416.m00496 expressed protein 27 9.6
At3g04630.1 68416.m00495 expressed protein 27 9.6
At2g17150.1 68415.m01980 RWP-RK domain-containing protein simila... 27 9.6
>At1g64320.1 68414.m07289 myosin heavy chain-related similar to
myosin heavy chain (GI:4249703) [Rana catesbeiana];
similar to smooth muscle myosin heavy chain SM2
(GI:2352945) [Homo sapiens]
Length = 476
Score = 37.1 bits (82), Expect = 0.012
Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Frame = +3
Query: 276 EIKDDLEEYMEYHRYLKEVVQALESDPDFRE-RLEKADEEDVKSGKIAEQLDFVNHNVRT 452
E K+ ++ M+ +K +++L S D E +LEK EE ++ + L R
Sbjct: 86 EEKERVKGLMDQVNGMKHELESLRSQKDESEAKLEKKVEEVTETKMQLKSLKEETEEERN 145
Query: 453 RLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKT 632
RL E + +L+ + ++ + LH+ M + E D + E+ D KKL+ +
Sbjct: 146 RLSE-EIDQLKGENQMLHRRISELDSLHMEMKTKSAHEMEDASKKLDTEVSDQKKLVKEQ 204
Query: 633 TSDLEAADKKRREEFKTYEIQKE 701
+ K +++ + + QK+
Sbjct: 205 DDIIRRLSAKIKDQQRLLKEQKD 227
>At2g18300.2 68415.m02134 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain ;supported by cDNA
gi|20127067|gb|AF488597.1|
Length = 337
Score = 34.3 bits (75), Expect = 0.083
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 540 NMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAA--DKKRREEFKTYEIQKEFEKH 713
NMG P E + T++ E D ++++KT + A KR+ E KT E QK EK
Sbjct: 82 NMGFGPPHESISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKT-EKK 140
Query: 714 XKME 725
K+E
Sbjct: 141 IKVE 144
>At2g18300.1 68415.m02133 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain ;supported by cDNA
gi|20127067|gb|AF488597.1|
Length = 335
Score = 34.3 bits (75), Expect = 0.083
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 540 NMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAA--DKKRREEFKTYEIQKEFEKH 713
NMG P E + T++ E D ++++KT + A KR+ E KT E QK EK
Sbjct: 82 NMGFGPPHESISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKT-EKK 140
Query: 714 XKME 725
K+E
Sbjct: 141 IKVE 144
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 33.1 bits (72), Expect = 0.19
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +3
Query: 330 VVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATK 509
V + LE LE + EE+ KS K E L H V + E+K + L R
Sbjct: 427 VQRLLEEKKKILSELESSKEEEEKSKKAMESLASALHEVSSESRELKEKLLSRGDQNYET 486
Query: 510 QFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAA--DKKRREEFKT 683
Q E DL + + K ++++ + + EI+ L + +T E+A D + RE
Sbjct: 487 QIE---DLKLVI-KATNNKYENMLDEARHEIDVLVNAVEQTKKQFESAMVDWEMREAGLV 542
Query: 684 YEIQKEFEK 710
+ KEF++
Sbjct: 543 NHV-KEFDE 550
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 32.7 bits (71), Expect = 0.25
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQAL-ESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
KSE +K++ ++ + VQ L E LE + EE+ KS K E L
Sbjct: 414 KSELETVKEEKNRALKKEQDATSRVQRLSEEKSKLLSDLESSKEEEEKSKKAMESLASAL 473
Query: 438 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKK 617
H V + E+K + L + H Q + DL + + K + ++ + + EI+ L
Sbjct: 474 HEVSSEGRELKEKLLSQGDHEYETQID---DLKLVI-KATNEKYENMLDEARHEIDVLVS 529
Query: 618 LIMKTTSDLEAADK 659
+ +T E++ K
Sbjct: 530 AVEQTKKHFESSKK 543
>At4g38070.1 68417.m05377 bHLH family protein contains Pfam profile:
PF00010 helix-loop-helix DNA-binding domain; PMID:
12679534; putative bHLH131 transcription factor
Length = 1513
Score = 32.3 bits (70), Expect = 0.34
Identities = 25/80 (31%), Positives = 39/80 (48%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
+ E E K+ LEE + L+E + LESD + R E + D+ K+AE+++
Sbjct: 589 EKETQEYKEMLEESEKCRVLLEEQISQLESDSNENIR-ELCSKVDIAYAKLAEEVEKTAS 647
Query: 441 NVRTRLDEIKRRELERLRHL 500
VR + + I E R R L
Sbjct: 648 LVR-KSESIDLNEEHRQREL 666
>At4g27180.1 68417.m03904 kinesin-like protein B (KATB)
Length = 745
Score = 31.9 bits (69), Expect = 0.45
Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Frame = +3
Query: 270 DSEIKDDLEEYME-YHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAE-----QLDF 431
+S+++ DL+E E R KE +ES + + + KA ++ + + K+++ Q D
Sbjct: 203 NSKLQGDLDEAHENIKRGEKERTGIVESIGNLKGQF-KALQDQLAASKVSQDDVMKQKDE 261
Query: 432 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDL 611
+ + + + EI++ + +R RH+ + N K +E + EIE+L
Sbjct: 262 LVNEIVSLKVEIQQVKDDRDRHITEIETLQAEATKQNDFKDTINELESKCSVQNKEIEEL 321
Query: 612 KKLIMKTTSDLEAADKKRREEFKTYEIQKE 701
+ ++ + L+ AD E+ +E QKE
Sbjct: 322 QDQLVASERKLQVADLSTFEKMNEFEEQKE 351
>At3g61710.2 68416.m06916 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 386
Score = 31.9 bits (69), Expect = 0.45
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Frame = +3
Query: 231 CSYAPPVTPDKSEDSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVK 401
C V DK E E++D D+E Y + L+ Q + S+ DF + +K +EE+ K
Sbjct: 172 CLECMRVLSDKLE-KEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERK 230
Query: 402 SGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHT 581
E+ + N V +L E++ + R L + ++ N+ + + E D
Sbjct: 231 LVAAIEETEKQNAEVNHQLKELEFKG-NRFNELEDRYWQEFNNFQFQL--IAHQEERDAI 287
Query: 582 NAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKT 683
A + +L+ KT ++A + EF T
Sbjct: 288 LAKIEVSQAHLELLNKTNVLIDAFPIRNDGEFGT 321
>At3g61710.1 68416.m06915 autophagy protein Apg6 family contains
weak similarity to Beclin 1 (Coiled-coil myosin-like
BCL2-interacting protein) (Protein GT197)
(Swiss-Prot:Q14457) [Homo sapiens]; contains Pfam
profile PF04111: Autophagy protein Apg6
Length = 517
Score = 31.9 bits (69), Expect = 0.45
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Frame = +3
Query: 231 CSYAPPVTPDKSEDSEIKD---DLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVK 401
C V DK E E++D D+E Y + L+ Q + S+ DF + +K +EE+ K
Sbjct: 172 CLECMRVLSDKLE-KEVEDVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERK 230
Query: 402 SGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHT 581
E+ + N V +L E++ + R L + ++ N+ + + E D
Sbjct: 231 LVAAIEETEKQNAEVNHQLKELEFKG-NRFNELEDRYWQEFNNFQFQL--IAHQEERDAI 287
Query: 582 NAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKT 683
A + +L+ KT ++A + EF T
Sbjct: 288 LAKIEVSQAHLELLNKTNVLIDAFPIRNDGEFGT 321
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 31.1 bits (67), Expect = 0.78
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 5/152 (3%)
Frame = +3
Query: 246 PVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQL 425
P TP+K E+ E +D+ E+ E +EVV ++ + ++E + + + +
Sbjct: 262 PKTPEKVEEEEEEDEEEDEEEEEEEEEEVVVEVKKKKKGKAKIEHSSTAPPEFRRAVAKT 321
Query: 426 DFV---NHNVRTRLDEIKRRELE--RLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAH 590
+ N+ LDEI R L+ +K E T LH + + ++DH +A
Sbjct: 322 SAAASSSVNLMKILDEIDDRFLKASECAQEVSKMLEATR-LHYHSNFADNRGYVDH-SAR 379
Query: 591 TFEIEDLKKLIMKTTSDLEAADKKRREEFKTY 686
+ K + ++ D + +E +T+
Sbjct: 380 VMRVITWNKSLRGISNGEGGKDDQESDEHETH 411
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 30.7 bits (66), Expect = 1.0
Identities = 34/154 (22%), Positives = 66/154 (42%), Gaps = 5/154 (3%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
KSE+S++K++ ++ E + ++ ++ E+ K EE K K ++
Sbjct: 983 KSENSKLKEENKDNKE-KKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEK 1041
Query: 441 NVRTRLDEIKRRELERLRHLATKQFELTNDL-----HVNMGKVPSSEHLDHTNAHTFEIE 605
+ R + ++ E L+ A K+ E T + H + K EH D+ + E +
Sbjct: 1042 DSEERKSKKEKEESRDLK--AKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDK 1099
Query: 606 DLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFE 707
KK ++ S + DKK E+ + K+ E
Sbjct: 1100 KEKKKHEESKSRKKEEDKKDMEKLEDQNSNKKKE 1133
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.7 bits (66), Expect = 1.0
Identities = 32/147 (21%), Positives = 63/147 (42%), Gaps = 2/147 (1%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESD-PDFRERLEKADEEDVKSGKIAEQLDFV 434
+K +KD+LE + Q+L+ + + +++E +++E + K L
Sbjct: 513 EKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSL--- 569
Query: 435 NHNVRTRLDEIKRRELERLRHLATKQFELTNDL-HVNMGKVPSSEHLDHTNAHTFEIEDL 611
N V+ +I E E + L T E L +N S L+ N H +ED
Sbjct: 570 NKEVKGMEKQILM-EREARKSLETDLEEAVKSLDEMNKNTSILSRELEKVNTHASNLEDE 628
Query: 612 KKLIMKTTSDLEAADKKRREEFKTYEI 692
K+++ ++ + + A K+ +E + I
Sbjct: 629 KEVLQRSLGEAKNASKEAKENVEDAHI 655
>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
expression supported by MPSS
Length = 649
Score = 29.9 bits (64), Expect = 1.8
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Frame = +3
Query: 375 EKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKV 554
EK EE+ ++ E L NV+ DE++ +E E + +A DLH+ + +
Sbjct: 316 EKLVEEEKSLQELVESLKAELKNVKMEHDEVEAKEAE-IESVA-------GDLHLKLSRS 367
Query: 555 PS--SEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRR-EEFKTYEIQKEFEK-HXKM 722
S + + + +ED+ I + +S+ EAA ++ K E+ KE E H +
Sbjct: 368 KSELEQCVTEESKAKAALEDMMLTINQISSETEAARREAEGMRNKAKELMKEAESAHLAL 427
Query: 723 E 725
E
Sbjct: 428 E 428
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
K E ++K + +E + +++ ++ ++ D RE K E V+ ++ ++ + +
Sbjct: 2213 KEEFGKMKSEAKEMEARYIEAQQIAESRKTYADEREEEVKLLEGSVE--ELEYTINVLEN 2270
Query: 441 NVRTRLDE-----IKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIE 605
V DE ++R ELE H +Q E + M ++ +H+D A IE
Sbjct: 2271 KVNVVKDEAERQRLQREELEMELHTIRQQMESARNADEEMKRILDEKHMDLAQAKK-HIE 2329
Query: 606 DLKK 617
L++
Sbjct: 2330 ALER 2333
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 29.9 bits (64), Expect = 1.8
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 6/151 (3%)
Frame = +3
Query: 267 EDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNV 446
EDS + D+L + EY R Q L + R+ + A++E++KS D
Sbjct: 394 EDSRLIDELRQTNEYQR-----SQILGLEKALRQTM--ANQEEIKSSS-----DLEIRKS 441
Query: 447 RTRLDEIKRRELERLRHLATKQFELTNDLHVNMG----KVPSSEHLDHTNAHTFEIEDLK 614
+ ++++ ++ LR + +K EL N L +G ++ + EH + A ED
Sbjct: 442 KGIIEDLNQKLANCLRTIDSKNVELLN-LQTALGQYYAEIEAKEHFERELA--VAKEDAM 498
Query: 615 KLI--MKTTSDLEAADKKRREEFKTYEIQKE 701
KL +K + + KK +EE + + E
Sbjct: 499 KLSARLKDVDEQLESSKKEKEEITSKVLHAE 529
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/161 (18%), Positives = 73/161 (45%), Gaps = 2/161 (1%)
Frame = +3
Query: 249 VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLD 428
+ +K E +++ EY+ LKE ++ S +E L+K + ED+K+ + + + +
Sbjct: 469 INKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQ---QELLQK-EAEDLKAQRESFEKE 524
Query: 429 FVNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTN-AHTFEIE 605
+ LDE K + L+++ ++ +L +H+ ++ + + N E
Sbjct: 525 W------EELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETL 578
Query: 606 DLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFE-KHXKME 725
++ K T + E + ++ E + ++ + E + K+E
Sbjct: 579 EVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLE 619
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 29.5 bits (63), Expect = 2.4
Identities = 24/80 (30%), Positives = 36/80 (45%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
+ E+ +KD+ EE E L+ V ++ SD D + ADE V G+ A D
Sbjct: 14 EEEEERVKDNEEEDEEE---LEAVARSSGSDDD---EVAAADESPVSDGEAAPVEDDYED 67
Query: 441 NVRTRLDEIKRRELERLRHL 500
EI +RE RL+ +
Sbjct: 68 EEDEEKAEISKREKARLKEM 87
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 28.7 bits (61), Expect = 4.1
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 2/140 (1%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNH 440
K ED++++ + +E E + L+E+V+ ++D + + ++ED AE
Sbjct: 580 KEEDAKMQTNRKELEEEIKDLQEIVEVAKAD-SMKLKESLVEKEDELKNTAAENRKLREM 638
Query: 441 NVRTRLDEIKRRELERLRH-LATKQFELTNDL-HVNMGKVPSSEHLDHTNAHTFEIEDLK 614
V + +D+I +L +++ L K+ +L N + +V ++L + E L
Sbjct: 639 EV-SSIDKID--QLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKIEELSAAKESLV 695
Query: 615 KLIMKTTSDLEAADKKRREE 674
+ K S ++ A++ RR E
Sbjct: 696 EKETKLLSTVQEAEELRRRE 715
>At5g61070.1 68418.m07663 histone deacetylase family protein (HDA18)
identical to HDA18 [Arabidopsis thaliana] GI:21105769;
similar to SP|Q9UBN7 Histone deacetylase 6 (HD6) {Homo
sapiens}; contains Pfam profile PF00850: Histone
deacetylase family
Length = 682
Score = 28.3 bits (60), Expect = 5.5
Identities = 27/85 (31%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 462 EIKRRELERLRH-LATKQFELTNDLHVNMG-KVPSSEHLDHTNAHTFEIEDLKKLIMKTT 635
E RR ++ +R L T L + N K PS+E + +A E+E+LK L+
Sbjct: 396 ESTRRVIQAVRERLCTYWPSLDASMASNENLKNPSAER-NSADALLREVEELKSLMAARD 454
Query: 636 SDLEAADKKRREEFKTYEI-QKEFE 707
+LEA K+ + + K E +KE E
Sbjct: 455 GELEARRKELKAKNKELEANEKELE 479
>At5g03500.1 68418.m00306 transcriptional co-activator-related low
similarity to transcriptional co-activator CRSP33 [Homo
sapiens] GI:4220890
Length = 443
Score = 28.3 bits (60), Expect = 5.5
Identities = 10/36 (27%), Positives = 23/36 (63%)
Frame = +3
Query: 606 DLKKLIMKTTSDLEAADKKRREEFKTYEIQKEFEKH 713
+LKK M+ ++E +KK++++ + ++ K +KH
Sbjct: 376 ELKKKKMEMEMEMEMGEKKKKKKIELMKVDKVLKKH 411
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +3
Query: 219 VFLHCSYAPPVTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDV 398
+++ CS + P+ + S S KDD+ ++E ++ + + D +E+
Sbjct: 207 IWISCSDSSPLNSESSPSSSTKDDINTFIESDPPVEADMWDVAEQMDPSLPVEETLHSMD 266
Query: 399 KSGKIAEQLDFVNH-NVRTRLD-EIKRRELER 488
S KI EQ D +H +V L+ E+ RE R
Sbjct: 267 FSYKIPEQDDLDSHVSVSAGLNGEVLMREKVR 298
>At4g15430.1 68417.m02360 early-responsive to dehydration
protein-related / ERD protein-related similar to ERD4
protein (early-responsive to dehydration stress)
[Arabidopsis thaliana] GI:15375406; contains Pfam
profile PF02714: Domain of unknown function DUF221
Length = 756
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +3
Query: 195 LVTIGCMIVFLHCS--YAPP-VTPDKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFR 365
L+TIG HC Y P VT +++ IKD L+ E + LK ++ + P+FR
Sbjct: 657 LLTIG---FHKHCKNRYQPAFVTYPLQQEAMIKDTLDRIREPNLNLKAFLRDAYAHPEFR 713
Query: 366 ERLEKADEEDVKS 404
+ EE ++S
Sbjct: 714 VGEDPEPEEKLES 726
>At4g00730.1 68417.m00099 anthocyaninless2 (ANL2) nearly identical
to Anthocyaninless2 [Arabidopsis thaliana] GI:5702094
Length = 802
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +3
Query: 267 EDSEIKDDLEEYMEYHRYLKEVVQALES------DPDFRERLEKADEEDVKSGKIAEQLD 428
ED + D YHR+ + +Q LES PD ++RLE + +++ Q+
Sbjct: 124 EDQDAADKPPRKKRYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLCLET----RQVK 179
Query: 429 FVNHNVRTRL-DEIKRRELERLR 494
F N RT++ +++R E LR
Sbjct: 180 FWFQNRRTQMKTQLERHENALLR 202
>At3g52950.1 68416.m05837 CBS domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing
protein contains Pfam profiles: PF00571 CBS domain,
PF00564: PB1 domain
Length = 556
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 534 HVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLE 647
H ++GK+ S L N+ +F+ EDLK + + TS E
Sbjct: 399 HSDIGKLSSYPSLGLGNSFSFKFEDLKGRVHRFTSGAE 436
>At3g52660.1 68416.m05801 RNA recognition motif (RRM)-containing
protein heterogeneous nuclear ribonucleoprotein R, Homo
sapiens, PIR:T02673; contains InterPro entry IPR000504:
RNA-binding region RNP-1 (RNA recognition motif) (RRM)
Length = 471
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +3
Query: 264 SEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHN 443
S +SE + DL+ + L+E V+ E + + E +E+ EE+V+ + E+ D
Sbjct: 14 SMESEERVDLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEED----A 69
Query: 444 VRTRLDEIKRRELERL 491
V T +E K+R +E L
Sbjct: 70 VATEEEEEKKRHVELL 85
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEED 395
D D++ ++ LEE +EY +E ++ +E + + +E+ +EE+
Sbjct: 22 DLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEE 67
>At5g24370.1 68418.m02873 invertase/pectin methylesterase inhibitor
family protein contains Pfam profile PF04043: Plant
invertase/pectin methylesterase inhibitor
Length = 191
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 180 INMRLLVTIGCMIVFLHCSYAPPVTPDKSEDSEI 281
+NM L++T MI+ H ++ V PDK S I
Sbjct: 5 MNMNLIITSLVMILISHLPFSSTVNPDKPTKSII 38
>At2g34780.1 68415.m04270 expressed protein
Length = 1297
Score = 27.9 bits (59), Expect = 7.2
Identities = 32/148 (21%), Positives = 63/148 (42%)
Frame = +3
Query: 258 DKSEDSEIKDDLEEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDFVN 437
+KSE++++ D E + + E+ L+ + + E+ E K A+ L +
Sbjct: 103 EKSEETKLLQDQASGRE--KEINELRDLLKKETLRADSSEEEREHAFKELNKAKALIVKD 160
Query: 438 HNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKK 617
+ + E+KR E+ +++L + + T K SE + + E+E L+
Sbjct: 161 EEIEQDIPEVKR-EISLVKNLLASERQKTESER----KKAESEK-KKADKYLSELEVLRN 214
Query: 618 LIMKTTSDLEAADKKRREEFKTYEIQKE 701
KT+SDL K E++K+
Sbjct: 215 SAHKTSSDLLTLTSNLETVKKQLELEKQ 242
>At1g71360.1 68414.m08237 expressed protein low similarity to
PIR|JC7185 chromosome 1 C1orf9 protein [Homo sapiens]
Length = 459
Score = 27.9 bits (59), Expect = 7.2
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +3
Query: 336 QALESDPDFRERLEKADEEDVKSGKIAEQLDFVNHNVRTRLDEIKRRELERLRHLATKQF 515
++ ESD D ++ EK E ++ + +++ + ++EIK H +
Sbjct: 242 ESFESDEDKSKQKEKEQEASPENAVVKDEVSLEKRKLPDPVEEIK--------HQPGSRM 293
Query: 516 ELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDLKKLIMKTTSDLEAADKKRREEFKTYEIQ 695
L + M K+ S + E LK ++ DLEA+ +++ E E++
Sbjct: 294 PGDTVLKILMQKIRSLDVSLSVLESYLEERSLKYGMIFKEMDLEASKREKEVETMRLEVE 353
Query: 696 --KEFEKHXKME 725
KE E++ K E
Sbjct: 354 GMKEREENTKKE 365
>At1g63300.1 68414.m07156 expressed protein similar to Intracellular
protein transport protein USO1 (Swiss-Prot:P25386)
[Saccharomyces cerevisiae]; similar to Myosin II heavy
chain, non muscle (Swiss-Prot:P08799) [Dictyostelium
discoideum]
Length = 1029
Score = 27.9 bits (59), Expect = 7.2
Identities = 30/159 (18%), Positives = 67/159 (42%), Gaps = 4/159 (2%)
Frame = +3
Query: 261 KSEDSEIKDDLEEYMEYHRYLKEV---VQALESDPDFRERLEKADEEDVKSGKIAEQLDF 431
+S ++E+K EE+ E +KE+ ++ LE + + + ++ +AD + V GK+ ++
Sbjct: 543 ESLEAELKKQSEEFSESLCRIKELESQMETLEEEMEKQAQVFEADIDAVTRGKVEQEQRA 602
Query: 432 VNHNVRTRLDEIKRRELERLRHLATKQFELTNDLHVNMGKVPSSEHLDHTNAHTFEIEDL 611
+ R K + K+ D + + + + N + L
Sbjct: 603 IQAEETLRKTRWKNASVAGKLQDEFKRLSEQMDSMFTSNEKMAMKAMTEANELRMQKRQL 662
Query: 612 KKLIMKTTSDLEAADKKRREEFKTYEIQKEFE-KHXKME 725
+++I +L A + E K +E+ ++ K +ME
Sbjct: 663 EEMIKDANDELRA--NQAEYEAKLHELSEKLSFKTSQME 699
>At3g04630.2 68416.m00496 expressed protein
Length = 286
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 294 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 431
E+ EY++ L+E QALE++ + E+ +K DE++ ++ + L F
Sbjct: 135 EKRKEYYQKLEEKNQALEAERNELEQRQK-DEQEAALKQLRKNLKF 179
>At3g04630.1 68416.m00495 expressed protein
Length = 287
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 294 EEYMEYHRYLKEVVQALESDPDFRERLEKADEEDVKSGKIAEQLDF 431
E+ EY++ L+E QALE++ + E+ +K DE++ ++ + L F
Sbjct: 136 EKRKEYYQKLEEKNQALEAERNELEQRQK-DEQEAALKQLRKNLKF 180
>At2g17150.1 68415.m01980 RWP-RK domain-containing protein similar
to nodule inception protein [Lotus japonicus]
GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
Length = 909
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 294 EEYMEYHRYLKEVVQALESDPDFRERLE--KADEEDVKSGKIAEQLDFVNHNVRTRLDEI 467
E M+ ++ +++A E D E K D +++ SG+ QLD V +NV +++
Sbjct: 506 EIQMQESSWIAHMIKANEKGKDVSLSWEYQKEDPKELSSGRENSQLDPVPNNVPLEAEQL 565
Query: 468 KRRELERLR 494
++ LR
Sbjct: 566 QQASTPGLR 574
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,213,641
Number of Sequences: 28952
Number of extensions: 245137
Number of successful extensions: 961
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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