Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0877
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.016
SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.021
SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0) 34 0.11
SB_49475| Best HMM Match : Syntaxin (HMM E-Value=8.5) 34 0.15
SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24) 30 1.9
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 29 5.7
SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016) 28 7.5
SB_59289| Best HMM Match : Lectin_C (HMM E-Value=2.1e-05) 28 9.9
SB_44080| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_27384| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_29362| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 509 MESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELKHTWVEWHNAAG 664
M+ Y + K+ + SK LSL+P + +I S S+D E LK W W +A G
Sbjct: 124 MDQIYGSGKVID-TDGSK--LSLDPHLYKILSNSRDYERLKFVWKGWRDATG 172
Score = 32.7 bits (71), Expect = 0.35
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +3
Query: 267 RASLAEWEYTSNITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYS 446
++S A W Y +N+T EN K Q L S + A ++ K + + T RR K +
Sbjct: 45 KSSEASWNYATNLTVENLNKRTQASLTYSAFLEEARKKAKKFDLTKLSNDT-RRQIKMVT 103
Query: 447 QLGVAALPDDKFQALMRTVSG 509
+ A+ D Q + V G
Sbjct: 104 E--TASSSDKDVQKTLNDVEG 122
>SB_53557| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1049
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 509 MESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELKHTWVEWHNA 658
M Y+T K+C + +SL+P++ + S S++ +EL W W +A
Sbjct: 259 MTEIYSTGKVCLNITRNNTCMSLDPDLGNLMSRSRNQDELVWAWRGWRDA 308
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 36.7 bits (81), Expect = 0.021
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 509 MESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELKHTWVEWHNA 658
M Y+T K+C + +SL+P++ + S S++ +EL W W +A
Sbjct: 543 MTEIYSTGKVCLNITRNNTCMSLDPDLGNLMSRSRNQDELVWAWRGWRDA 592
>SB_31634| Best HMM Match : Peptidase_M2 (HMM E-Value=0)
Length = 663
Score = 34.3 bits (75), Expect = 0.11
Identities = 23/93 (24%), Positives = 40/93 (43%)
Frame = +2
Query: 509 MESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELKHTWVEWHNAAGAXXXXXXX 688
M Y++AK+ + + +LSL P++TE+ + S++ EL W +W G
Sbjct: 125 MTEIYSSAKVTNPAIGT--NLSLNPQLTELMANSRNSPELLAAWRDWRQVTGPKMRPLFK 182
Query: 689 XXXXFYNEGRQA*WVFDKRSRXVAIEYEVPDFE 787
N+G + F YE+P+ E
Sbjct: 183 DCVTLANQGAKDNG-FQNMYEYQTHLYELPNLE 214
>SB_49475| Best HMM Match : Syntaxin (HMM E-Value=8.5)
Length = 200
Score = 33.9 bits (74), Expect = 0.15
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 509 MESNYATAKICSYKNESKCDLSLEPEITEIFSTSQDPEELKHTWVEWHNAAG 664
M+ Y++ K+ E LSL P++ +I + S+D E L W W +A G
Sbjct: 125 MDKIYSSGKVKDANGEM---LSLNPDLYKILAESRDYERLLFVWKGWRDAVG 173
>SB_3851| Best HMM Match : TSP_1 (HMM E-Value=3.7e-24)
Length = 429
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +2
Query: 539 CSYKNESKCDLSLEPEITEIFSTSQD-PEELKHTWVEWHNAAG 664
CS K+ S CDL +P+ + + TSQ+ P+ + W + G
Sbjct: 179 CSDKDTSACDLRTKPQSSTVCGTSQECPKWIIGNWSQCSRTCG 221
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +3
Query: 243 QSDRLRKNRASLAEW-EYTSNITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFT 419
Q D LRK A L + + SN + +EK ++LS+QEKA + +D
Sbjct: 926 QIDTLRKQNAQLKDQLKDASNKLVQAKEKIATLEVKLSQQEKANQALNSVVAKKDKVIAD 985
Query: 420 LRRMFKKYSQLGVAALPD 473
+ KKY + A D
Sbjct: 986 INEKIKKYQKAADEAKRD 1003
>SB_38675| Best HMM Match : HEAT (HMM E-Value=0.0016)
Length = 606
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 771 SYSIATIRLRLSKTH*AWRPSL*KVHVVGEVLLXVAPAALCH 646
S S+ +R L T W+P + +H E +L VA +ALC+
Sbjct: 125 SRSVQQLRTSLQDTM-VWKPIMKLMHNASEGMLTVASSALCN 165
>SB_59289| Best HMM Match : Lectin_C (HMM E-Value=2.1e-05)
Length = 769
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 635 YASTPQGLGSWRIFQLSQAPKIDH 564
Y+S+PQG+ R+F+ SQ DH
Sbjct: 622 YSSSPQGVSWGRVFETSQEVSEDH 645
>SB_44080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 473 RQIPSFDENCIGMESNYATAKICSYKNESKCDL---SLEPEITEIFSTSQDPEE 625
R++P E C G + KI K SKC + S P++ F + PEE
Sbjct: 8 RELPPPPEKCFGFRTPPPPRKIPDPKTRSKCVVLKSSENPKLLNYFYAADLPEE 61
>SB_27384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1032
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -2
Query: 553 IFVRADLRSGVVRFHPDTVLIKAWNLSSGRAATPS*LYFLNILRNVKSWKSCHPYILVSS 374
+ V+ LRS V R V++ W L A+TPS +YF N R+ + + Y + S+
Sbjct: 133 VVVKHPLRSRVRRLSVARVVVGIWCLGLV-ASTPSTIYFTNQHRSHREQRMLSCYQVTSA 191
Query: 373 Q 371
+
Sbjct: 192 E 192
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,413,436
Number of Sequences: 59808
Number of extensions: 440047
Number of successful extensions: 1180
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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