Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm1123
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.9  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    24   3.8  
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    23   6.7  
AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450 pr...    23   6.7  
AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          23   8.9  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          23   8.9  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          23   8.9  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          23   8.9  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 533 IIFKNNEK*RPLSERESGSYSGTRQRNRF 619
           IIF  N +   + ER  GS+S   +RN F
Sbjct: 37  IIFVRNNRALLIYERMGGSWSEVHKRNNF 65


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 455 ETLLHVSPPGPRWSICYYHQDLHRRRLQAA 366
           +++ ++S P   WSI Y+ +D+    +QAA
Sbjct: 210 QSVRNLSRPITGWSIKYFSKDIFEVMMQAA 239


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 456 RNPSPRQSSRASLEYLLLPPRSAPTEAPSG 367
           RN   ++  RAS    ++PPRS    A  G
Sbjct: 225 RNQHEQEQPRASTSRAVMPPRSEALTAVRG 254


>AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450
           protein.
          Length = 106

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -1

Query: 269 R*CIGKRFSAIHFQGWLLRQVSR 201
           R CIG+RF+ +  +  L+R +SR
Sbjct: 80  RSCIGQRFAMLEMKTVLVRLLSR 102


>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 136 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 225
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 136 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 225
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 136 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 225
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = +1

Query: 136 GVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 225
           G G +    GG GS  P    + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,106
Number of Sequences: 2352
Number of extensions: 15147
Number of successful extensions: 301
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 301
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)