Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0941
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.0  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    23   1.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    23   3.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   5.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.5  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 46  RSVSFYSPSTGALNV*LNLVGSRIRSFTSKMSVFKILLSSIIHIHVCQFIMFILCE 213
           RSV F S   G +N+       R+    SK   F  L++++++   C   +F+LCE
Sbjct: 377 RSVFFLSEIFGLVNLKYRETYFRL----SKTKTFCTLVTALVY---CSLAIFVLCE 425



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 572 IFIQLTFRIQKQNGNVLKNVMLYNVIIVLL 483
           IF  +TF   + N    K ++LYN+I+ +L
Sbjct: 23  IFGFVTFTCTRSNFRSSKLLILYNIILQVL 52


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +3

Query: 27  SAAHSLSLCLFLFPLHRSVKRLTQPCW 107
           S+AH++   L   PLH SV RL  P W
Sbjct: 58  SSAHTV---LIPQPLHPSVPRLGHPQW 81


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 572 IFIQLTFRIQKQNGNVLKNVMLYNVIIVLL 483
           IF  +TF   + N    K ++LYN+I+ +L
Sbjct: 41  IFGFVTFTCTRSNFRSSKLLILYNIILQVL 70


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +1

Query: 505 YNITFFRTFPFCFCIR 552
           Y + F +  PFCF +R
Sbjct: 180 YLLIFVQQIPFCFFVR 195


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 364 CYFHIKYSNIRMLFTSR 414
           C F  KY NI +L T +
Sbjct: 167 CIFRGKYRNINLLLTEQ 183


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 5/22 (22%), Positives = 13/22 (59%)
 Frame = +2

Query: 377 LNIQIYVCYLLHVIVNFYLFFS 442
           L +    CY +++   +Y+++S
Sbjct: 141 LQLVFVFCYFIYLFTVYYIYYS 162


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,705
Number of Sequences: 336
Number of extensions: 3521
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)