Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32129
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.13 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.70 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.70 
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    23   2.1  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.1  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   2.1  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   2.8  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   2.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   4.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   6.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 26.6 bits (56), Expect = 0.13
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = +1

Query: 151 SSQEPDRPAPRPVEE--ERTSIARKPPTPARE 240
           SS E   P P+PVEE  ++ S  + P  P+R+
Sbjct: 385 SSNEIVEPVPQPVEEVTQKPSSTKAPAPPSRD 416


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  NKVRMMK*HALKDKTKAQLHHKNQI 169
           N++R  K  + KDK  +Q+ HKN +
Sbjct: 436 NEMRSEKPESKKDKKGSQVDHKNNL 460


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  NKVRMMK*HALKDKTKAQLHHKNQI 169
           N++R  K  + KDK  +Q+ HKN +
Sbjct: 328 NEMRSEKPESKKDKKGSQVDHKNNL 352


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 450 KRENRTGYNQRYS 488
           ++ENR  YNQ YS
Sbjct: 88  RQENRVKYNQNYS 100


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 450 KRENRTGYNQRYS 488
           ++ENR  YNQ YS
Sbjct: 148 RQENRVKYNQNYS 160


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 450 KRENRTGYNQRYS 488
           ++ENR  YNQ YS
Sbjct: 148 RQENRVKYNQNYS 160


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 157 QEPDRPAPRPVEEERTSIARKPPTPAR 237
           + P  P PRP     T ++R+ P P R
Sbjct: 248 ENPPTPKPRP-----TKVSRRKPRPPR 269


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 436 VKHTGNERTAPVTTNGTAG 492
           VK TGN+   P+T+  T+G
Sbjct: 146 VKVTGNDAPPPITSFETSG 164


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 195 FFNRSWGWTIWF 160
           +FNR +GW I F
Sbjct: 150 YFNRIFGWNILF 161


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 268 IHQIHHRLTPPELV 227
           +HQ H R+ PP+ +
Sbjct: 651 VHQTHMRIRPPKKI 664


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 268 IHQIHHRLTPPELV 227
           +HQ H R+ PP+ +
Sbjct: 651 VHQTHMRIRPPKKI 664


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 268 IHQIHHRLTPPELV 227
           +HQ H R+ PP+ +
Sbjct: 651 VHQTHMRIRPPKKI 664


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 268 IHQIHHRLTPPELV 227
           +HQ H R+ PP+ +
Sbjct: 651 VHQTHMRIRPPKKI 664


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 195 FFNRSWGWTIWFL 157
           F+N ++GW I FL
Sbjct: 213 FYNSAFGWPIAFL 225


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -1

Query: 321 LYWRWSFTLLST 286
           LY+ WSF LL T
Sbjct: 318 LYFYWSFALLIT 329


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +1

Query: 88  QRQQSEDDEITRLKRQNKGAASSQEPDRPAP 180
           +++   D+E      + K ++S  E +RP P
Sbjct: 81  KKEDESDEEKPTTSFKLKDSSSDSEDERPRP 111


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.305    0.121    0.332 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,890
Number of Sequences: 336
Number of extensions: 1789
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.1 bits)