Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32102
         (307 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   2.2  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   2.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    19   8.8  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 LMXIKIQAEHYVTYCSTIAI 209
           L  +KI+ + Y+ YCS+  +
Sbjct: 115 LKPVKIRTKVYLVYCSSALV 134


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.4 bits (43), Expect = 2.2
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 150 LMXIKIQAEHYVTYCSTIAI 209
           L  +KI+ + Y+ YCS+  +
Sbjct: 111 LKPVKIRTKVYLVYCSSALV 130


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 194 TISYVMFCLY 165
           TISY++F L+
Sbjct: 257 TISYILFALF 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,718
Number of Sequences: 336
Number of extensions: 642
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5518292
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)