Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32098
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_38207| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.3  
SB_59063| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)                 28   5.3  
SB_52932| Best HMM Match : Ank (HMM E-Value=0)                         28   5.3  
SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)                    27   6.9  

>SB_38207| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 189

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 201 PPSAHQFRYARCRWKSRNCSCKLPSGLASNSD 106
           PPS    R+    W +R CS  L  G+ SN +
Sbjct: 105 PPSEGAKRHEFATWHARGCSADLEKGVKSNEE 136


>SB_59063| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 278

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 74  PPTEDYPKIVRSEFDASPDGSLQLQFRDF 160
           PP  D    + S++D S  GS Q++FR F
Sbjct: 199 PPVCDIDGDLSSDYDGSSSGSSQIRFRPF 227


>SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
          Length = 756

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 197 GGSRRRQQASRYCCCA 244
           GGSRRR   S++CC A
Sbjct: 97  GGSRRRNSKSKFCCFA 112


>SB_52932| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1266

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 159 SNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGKPETITYFADET 311
           S  + +  TG  K  LDD  KPHV+  ++ SY     D   E   +   ET
Sbjct: 204 SKTVTKMFTGFRKLTLDDLRKPHVVKDIQ-SYILNRLDDDSELRKHLTRET 253


>SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22)
          Length = 1123

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 241 CVEATVTRTLTANLKPLRTSLTRLDT 318
           C   T    +T N KP +TSLTRL++
Sbjct: 348 CPVDTKAMNITVNYKPEKTSLTRLES 373


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,442,074
Number of Sequences: 59808
Number of extensions: 250497
Number of successful extensions: 788
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)