Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV32083
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_5010| Best HMM Match : No HMM Matches (HMM E-Value=.)               32   0.32 
SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)               30   0.98 
SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)                  29   3.0  
SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   4.0  
SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)                 28   5.3  
SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.3  
SB_52932| Best HMM Match : Ank (HMM E-Value=0)                         27   6.9  

>SB_5010| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 86

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 33  KNEIDHRCSSRPCGYRHRCPPTEDYPKIVRSEFDASP 143
           KN +   C+ +   YR+R P TED  K  R E  A P
Sbjct: 2   KNRMPLECTCQVTAYRYRRPTTEDCHKTPRGEATAEP 38


>SB_13545| Best HMM Match : Peptidase_M49 (HMM E-Value=0)
          Length = 488

 Score = 30.3 bits (65), Expect = 0.98
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +3

Query: 123 SEFDASPDGAYNYNFETSNGIVRSETGE 206
           +E DA PDG+YN++ ++   +V +ETGE
Sbjct: 218 TEEDAKPDGSYNFDHKS---VVNTETGE 242


>SB_28910| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 417

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 72  GYRHRCPPTEDYPKIVRSEFDASPDGAY 155
           G R   PPT+DY +  RS+ D S DG Y
Sbjct: 11  GKRPPEPPTKDYDRRSRSQDDDSDDGCY 38


>SB_22561| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 310

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = +3

Query: 69  CGYRHRCPPTEDYPKIVRSEFDASPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVI 248
           C +    P T D       E D+     YNY+    NG+  S+ G+L      DN  HV+
Sbjct: 48  CDFNKDVPDTSDNNGY--QEPDSEQADGYNYDTSHHNGVATSQRGQLARLAMGDNN-HVL 104

Query: 249 VA 254
            A
Sbjct: 105 NA 106


>SB_53355| Best HMM Match : CHCH (HMM E-Value=3.3e-07)
          Length = 599

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +3

Query: 138 SPDGAYNYNFETSNGIVRSETGELKEALDDDNKPHVIVAVR-GSYSYTNTDGKPETITYX 314
           SP G Y    E +  I R E  +L       +K H ++AVR G Y   + D    T+T+ 
Sbjct: 94  SPSGHYYKVCEPNFFIGRDENLDLTLKSRSVDKKHAVIAVRDGRYELYDMDSLNGTVTHS 153

Query: 315 A 317
           A
Sbjct: 154 A 154


>SB_24669| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 164

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 128 IRRQPRWSLQLQFRDFQRHRA*RNW*AEGGSRRRQ 232
           +RR+  WS+Q++  +  RH   + W   GG ++R+
Sbjct: 3   VRRKDAWSMQVRQVEHPRHSYVQMWRKFGGPKKRE 37


>SB_57588| Best HMM Match : Vicilin_N (HMM E-Value=1.4)
          Length = 756

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 212 GGSRRRQQASRYCCCA 259
           GGSRRR   S++CC A
Sbjct: 97  GGSRRRNSKSKFCCFA 112


>SB_37813| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 450

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
 Frame = +3

Query: 138 SPDGAYNYNFETSNGIVRS----ETGELKEALDDDNKPHVIVAVRGSYSY 275
           SPDG  + NFE  NG + +        + +A++ D++  V+V ++G Y++
Sbjct: 205 SPDGICSVNFEFYNGAMSTAQCRRLSSVLQAVERDDRVKVVV-LKGGYNF 253


>SB_52932| Best HMM Match : Ank (HMM E-Value=0)
          Length = 1266

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +3

Query: 174 SNGIVRSETGELKEALDDDNKPHVIVAVRGSYSYTNTDGKPETITYXADET 326
           S  + +  TG  K  LDD  KPHV+  ++ SY     D   E   +   ET
Sbjct: 204 SKTVTKMFTGFRKLTLDDLRKPHVVKDIQ-SYILNRLDDDSELRKHLTRET 253


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,739
Number of Sequences: 59808
Number of extensions: 268523
Number of successful extensions: 697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)