Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31486
(765 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g02640.2 68417.m00359 bZIP transcription factor family protei... 34 0.12
At4g02640.1 68417.m00358 bZIP transcription factor family protei... 34 0.12
At5g57830.1 68418.m07232 expressed protein contains Pfam profile... 33 0.16
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 31 0.84
At3g04960.1 68416.m00538 expressed protein low similarity to SP|... 30 1.5
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 29 2.6
At4g15870.1 68417.m02412 terpene synthase/cyclase family protein 29 2.6
At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibit... 29 2.6
At4g01780.1 68417.m00233 XH/XS domain-containing protein contain... 29 2.6
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 29 3.4
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 29 3.4
At3g05110.1 68416.m00555 hypothetical protein 29 3.4
At5g57970.1 68418.m07253 methyladenine glycosylase family protei... 28 5.9
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 28 5.9
At5g57410.1 68418.m07172 expressed protein 28 7.8
At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger) fa... 28 7.8
At2g34730.1 68415.m04265 myosin heavy chain-related low similari... 28 7.8
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 28 7.8
At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein ... 28 7.8
>At4g02640.2 68417.m00359 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 417
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 322 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 501
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 205 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 262
Query: 502 TLKKVSKYENKF 537
LK++S +K+
Sbjct: 263 LLKQLSNMNHKY 274
>At4g02640.1 68417.m00358 bZIP transcription factor family protein
contains Pfam profile: PF00170 bZIP transcription
factor; identical to cDNA bZIP protein BZO2H1,
alternatively spliced GI:10954094
Length = 411
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/72 (29%), Positives = 39/72 (54%)
Frame = +1
Query: 322 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKP 501
+++D+ NE T +D ++ R+ + +RK + SDL +QVNDL+G+
Sbjct: 199 EDLDEENETTGSLKPEDV-KKSRRMLSNRESARRSRRRKQEQTSDLETQVNDLKGEH-SS 256
Query: 502 TLKKVSKYENKF 537
LK++S +K+
Sbjct: 257 LLKQLSNMNHKY 268
>At5g57830.1 68418.m07232 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593
Length = 387
Score = 33.5 bits (73), Expect = 0.16
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Frame = +1
Query: 379 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKA 558
E++ E E ++ +K+MEI+ L QV R K + + ENKF + +
Sbjct: 78 EKMCHAETSLVLFEDLIYQKEMEIASLEFQVQAYRCKLLSLGCSDPAVIENKFPETLIFS 137
Query: 559 AEFNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRS-EGKEEEVEA 699
E + NQ + +K+ + G E++ L+ G S E K+ VE+
Sbjct: 138 GENSRGNQKRKMKRNLSSPFDGISSERSLLLSDVNGESFEEKKGLVES 185
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 31.1 bits (67), Expect = 0.84
Identities = 24/93 (25%), Positives = 39/93 (41%)
Frame = +1
Query: 361 VCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFA 540
V E + R E + +R +D+N ++ K VKP KV K +
Sbjct: 280 VVSSQKELVERKAKEPLVDSKVPRRSKRLANDVNVLLDKRPVKAVKPDYLKVKKAPKQSR 339
Query: 541 KLQKKAAEFNFRNQLKVVKKKEFTLGRGRQREK 639
+L+K +E Q + K+ T G GR+ +K
Sbjct: 340 RLEKSLSELLIDGQAQKGDKQR-TFGNGREGKK 371
>At3g04960.1 68416.m00538 expressed protein low similarity to
SP|P32380 NUF1 protein (Spindle poly body spacer protein
SPC110) {Saccharomyces cerevisiae}
Length = 556
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +1
Query: 412 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE--FNFRNQL 585
DLE + +RK+ E+ ++ + D ++ +LK + +++F L+++A E + RNQ+
Sbjct: 6 DLEGLDQRKE-EMRNIFDDIQDKASLILQFSLKW-EEIDDRFGFLKQRAMEKEVSVRNQI 63
Query: 586 KVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKEEEV 693
++KKE L +RE+ + +G E ++
Sbjct: 64 LELEKKEERLRLVEERERKIEASFSTLQEKGNESDL 99
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +1
Query: 379 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFV 495
+++A L+ ++ +LE +++K EIS+ SQ+ +L+ + +
Sbjct: 879 QQVASLDSQRAELEIQLEKKSEEISEYLSQITNLKEEII 917
>At4g15870.1 68417.m02412 terpene synthase/cyclase family protein
Length = 598
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/64 (26%), Positives = 30/64 (46%)
Frame = -2
Query: 632 LCLPLPKVNSFFFTTFNWLRKLNSAAFFWSLANLFSYLETFFSVGLTNLPLRSLTWEFRS 453
+ L K+N F F NW+++L + +W +L S L +F L L ++ F
Sbjct: 284 MLLRFAKIN-FKFLQLNWIQELKTLTKWWKQQDLASKLPPYFRDRLIECYLFAIMIYFEP 342
Query: 452 EISI 441
+ S+
Sbjct: 343 QFSL 346
>At4g02250.1 68417.m00304 invertase/pectin methylesterase inhibitor
family protein low similarity to SP|P83326
Pectinesterase inhibitor (Pectin methylesterase
inhibitor) (PMEI) {Actinidia chinensis}, pistil-specific
gene sts15 [Solanum tuberosum] GI:1616628; contains Pfam
profile PF04043: Plant invertase/pectin methylesterase
inhibitor
Length = 145
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 316 KPKNIDDANEDTIKRVCKDYHERIARLED 402
K KN++ A EDT+ K+Y + +A+L+D
Sbjct: 53 KQKNLEPALEDTLDDCSKNYLDAVAQLDD 81
>At4g01780.1 68417.m00233 XH/XS domain-containing protein contains
Pfam profiles PF03469: XH domain, PF03468: XS domain
Length = 456
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/91 (25%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Frame = +1
Query: 340 NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVS 519
+ED +R ++ HE+I RLE + ++ I ++E+ L Q+N ++ + V
Sbjct: 219 SEDLEQRQKEELHEKIIRLERQIDQVQAI----ELEVEQLKGQLNVMKHMASDGDAQVVK 274
Query: 520 KYENKFAKLQKKAAE---FNFRNQLKVVKKK 603
+ + F L +K AE N NQ +++++
Sbjct: 275 EVDIIFKDLVEKEAELADLNKFNQTLILRER 305
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Frame = +1
Query: 322 KNIDDANEDTIKRVCKDY--HERIA---RLEDEKFDLEYIVKRKDMEISDLNSQVNDLRG 486
K + NE+ ++ ++ H +IA +ED+ LEY VK ++ I L+ ++ D
Sbjct: 228 KKRKEFNEEMKSKITENQKLHTKIAVIDEIEDKSKKLEYQVKEQEDIIQRLSMEIKD--- 284
Query: 487 KFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQL 585
K LK+ +KF++ QK ++F ++L
Sbjct: 285 --QKKLLKEQKDAIDKFSEDQKLMKRWSFGSKL 315
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +1
Query: 346 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK-----PTLK 510
+ +++ C + + ++DEK +E + E L Q+ND+R F L+
Sbjct: 499 EELRKQCMEMESFLNSIKDEKTHIETANESLVQENQMLLQQINDIRENFENFHKEHEELE 558
Query: 511 KVSKYENKFAKLQKKA---AEFNFRNQLKVVKKKEFTLGRGRQREK 639
+K E K + K+ + + R +L + K++ + R QREK
Sbjct: 559 VKAKAELKVLVKEVKSLRTTQSDLRQELSGIMKEKLEMERIVQREK 604
>At3g05110.1 68416.m00555 hypothetical protein
Length = 372
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/77 (23%), Positives = 38/77 (49%)
Frame = +1
Query: 412 DLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAEFNFRNQLKV 591
DLE I K E S+ + ++ +LK++ EN+ +++ K F+ + +
Sbjct: 35 DLEQIQKEDSSEEICTESERMRKETELIETSLKQLEARENELREVEAKRKFFDLKEKELE 94
Query: 592 VKKKEFTLGRGRQREKA 642
K+KE L + + +E++
Sbjct: 95 EKEKELELKQRQVQERS 111
>At5g57970.1 68418.m07253 methyladenine glycosylase family protein
similar to SP|P05100 DNA-3-methyladenine glycosylase I
(EC 3.2.2.20) (3-methyladenine-DNA glycosylase I,
constitutive) {Escherichia coli}; contains Pfam profile
PF03352: Methyladenine glycosylase
Length = 347
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +2
Query: 269 NVKLLKGGASSRRGAVNLRTLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSL 430
+++ L+ +S R G+ + TPT+ + K T+NA+ +L+ N++L
Sbjct: 40 SLRKLERSSSGRTGSDEKTSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNL 93
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 326 TLTTPTKILLRGFAKTTMNASLVLKMKNSIWNTSLKGKIW 445
TLT TK+ G ++ + AS + + + S+WNTS W
Sbjct: 577 TLTPITKLCFAGKSEFLVAASHIPRPELSVWNTSKLSLSW 616
>At5g57410.1 68418.m07172 expressed protein
Length = 373
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/100 (24%), Positives = 50/100 (50%)
Frame = +1
Query: 385 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 564
IARLE + LE ++++KD EI+ + ++ +K ++K+ + ++F ++ +
Sbjct: 95 IARLEAKVERLEALLQQKDREIATI-TRTEAKNTAALKSQIEKLQQERDEFQRMVIGNQQ 153
Query: 565 FNFRNQLKVVKKKEFTLGRGRQREKA*LVEGQAGRSEGKE 684
Q+ +KKKE + ++R L+E + G E
Sbjct: 154 VK-AQQIHEMKKKEKDYIKLQERLNQVLMEKKKESRSGME 192
>At5g18760.1 68418.m02228 zinc finger (C3HC4-type RING finger)
family protein predicted proteins, Arabidopsis thaliana
; contains Pfam profile PF00097: Zinc finger, C3HC4 type
(RING finger)
Length = 411
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = -2
Query: 674 SDLPACPSTSQAFSLCLPLPKVNSFFFTTFNWLRKLNSAAFFWSLANLFSY-LETFFSVG 498
S P S Q F + + + V FFF +R LNS A F +A FS+ L S
Sbjct: 279 SSEPQSISVGQEFVVLVLISTVCYFFFLEHLLIRDLNSQAIF--VAAPFSFTLALLASTF 336
Query: 497 LTNLPLRSLTWEFRS-EISISFLL 429
L +R W + + E ++ LL
Sbjct: 337 AVILAIREYIWTYAALEFALVALL 360
>At2g34730.1 68415.m04265 myosin heavy chain-related low similarity
to SP|P14105 Myosin heavy chain, nonmuscle (Cellular
myosin heavy chain) {Gallus gallus}
Length = 825
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +1
Query: 427 VKRKDMEISDLNSQVNDLRGKFVKPTLKKVSKYENKFAKLQKKAAE 564
+K ++SDL+ Q+N+++GK T K+ + E K L+K AE
Sbjct: 729 LKNMQSQLSDLSHQINEVKGK--ASTYKQ--RLEKKCCDLKKAEAE 770
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 385 IARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 504
++ L K L ++++KD EIS+ NS + K VK T
Sbjct: 117 MSELHKSKRQLMELLEQKDAEISEKNSTIKSYLDKIVKLT 156
>At1g77550.1 68414.m09030 tubulin-tyrosine ligase family protein
contains tubulin-tyrosine ligase family domain,
Pfam:PF03133
Length = 867
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 346 DTIKRVCKDYHERIARLEDEKFDLEYIV 429
+T ++C+ Y E A + KFDL Y+V
Sbjct: 674 ETGPKICQKYIEHPALFKGNKFDLRYVV 701
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,051,736
Number of Sequences: 28952
Number of extensions: 197067
Number of successful extensions: 736
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1712086600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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