Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31474
(684 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATP... 113 8e-26
At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putati... 106 1e-23
At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putati... 98 5e-21
At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly id... 31 0.94
At5g26680.1 68418.m03171 endonuclease, putative similar to Swiss... 29 2.2
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 29 3.8
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 29 3.8
At5g55600.1 68418.m06932 agenet domain-containing protein / brom... 28 5.0
At5g55540.1 68418.m06919 expressed protein 28 5.0
At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR ... 28 6.6
At3g07610.1 68416.m00911 transcription factor jumonji (jmjC) dom... 28 6.6
At2g41990.1 68415.m05194 expressed protein 28 6.6
At2g02180.1 68415.m00154 tobamovirus multiplication protein 3 (T... 28 6.6
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 27 8.8
At3g58810.2 68416.m06555 zinc transporter, putative similar to z... 27 8.8
At3g58810.1 68416.m06554 zinc transporter, putative similar to z... 27 8.8
At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containi... 27 8.8
>At4g11150.1 68417.m01807 vacuolar ATP synthase subunit E / V-ATPase
E subunit / vacuolar proton pump E subunit (VATE)
identical to SP|Q39258 Vacuolar ATP synthase subunit E
(EC 3.6.3.14) (V-ATPase E subunit) (Vacuolar proton pump
E subunit) {Arabidopsis thaliana}
Length = 230
Score = 113 bits (273), Expect = 8e-26
Identities = 74/211 (35%), Positives = 109/211 (51%), Gaps = 11/211 (5%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++D DV +QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDGDVSRQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQDYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+KVL+ ++D V + D+A K L V +D Y +LL LIVQ
Sbjct: 61 QADVRKKIDYSMQLNASRIKVLQAQDDIVNAMKDQAAKDLLNVSRDEYAYKQLLKDLIVQ 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSPDT---- 591
L +L EP+V +R R+ D LVE++L A+ +Y K K + VDT+ FL P
Sbjct: 121 CLLRLKEPSVLLRCREEDLGLVEAVLDDAKEEYAGKAKVHAPEVAVDTKIFLPPPPKSND 180
Query: 592 -----C-GGIELVAARGRIKISNTLESRLEL 666
C GG+ L + G+I NTL++RL++
Sbjct: 181 PHGLHCSGGVVLASRDGKIVCENTLDARLDV 211
>At3g08560.1 68416.m00993 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 235
Score = 106 bits (255), Expect = 1e-23
Identities = 69/219 (31%), Positives = 109/219 (49%), Gaps = 13/219 (5%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DADV KQI+ M+ FI Q FNIE+ +L++ + K+
Sbjct: 1 MNDADVSKQIQQMVRFIRQEAEEKANEISISAEEEFNIERLQLLESAKRKLRQDYDRKLK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSELLVTLIVQ 426
I S LN +R+K L+ ++D V + D A K L V D Y +LL +LI++
Sbjct: 61 QVDIRKRIDYSTQLNASRIKYLQAQDDVVTAMKDSAAKDLLRVSNDKNNYKKLLKSLIIE 120
Query: 427 ALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIK-KDVVLKVDTENFL-------- 579
+L +L EP+V +R R+ DK +VES++ A+ Y K K + +D + FL
Sbjct: 121 SLLRLKEPSVLLRCREMDKKVVESVIEDAKRQYAEKAKVGSPKITIDEKVFLPPPPNPKL 180
Query: 580 ----SPDTCGGIELVAARGRIKISNTLESRLELIAQQLL 684
P GG+ L + G+I NTL++RL++ +Q L
Sbjct: 181 PDSHDPHCSGGVVLASQDGKIVCENTLDARLDVAFRQKL 219
>At1g64200.1 68414.m07273 vacuolar ATP synthase subunit E, putative
/ V-ATPase E subunit, putative / vacuolar proton pump E
subunit, putative similar to SP|Q39258 Vacuolar ATP
synthase subunit E (EC 3.6.3.14) (V-ATPase E subunit)
(Vacuolar proton pump E subunit) {Arabidopsis thaliana};
contains Pfam profile PF01991: ATP synthase (E/31 kDa)
subunit
Length = 237
Score = 97.9 bits (233), Expect = 5e-21
Identities = 72/217 (33%), Positives = 104/217 (47%), Gaps = 17/217 (7%)
Frame = +1
Query: 67 LSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXXXX 246
++DAD QI+ M+ FI Q FNIEK +LV+ ++ KI
Sbjct: 1 MNDADASIQIQQMVRFIRQEAEEKANEISISSEEEFNIEKLQLVEAEKKKIRQEYEKKEK 60
Query: 247 XXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKL------YSELL 408
I S LN +R+KVL+ ++D V + +EA K+L +V + Y LL
Sbjct: 61 QVDVRKKIDYSMQLNASRIKVLQAQDDIVNAMKEEAAKQLLKVSQHGFFNHHHHQYKHLL 120
Query: 409 VTLIVQALFQLMEPTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDV-VLKVDTENFLSP 585
LIVQ L +L EP V +R R+ D +VES+L A +Y K K + VD + FL P
Sbjct: 121 KDLIVQCLLRLKEPAVLLRCREEDLDIVESMLDDASEEYCKKAKVHAPEIIVDKDIFLPP 180
Query: 586 ----------DTCGGIELVAARGRIKISNTLESRLEL 666
GG+ L + G+I NTL++RLE+
Sbjct: 181 APSDDDPHALSCAGGVVLASRDGKIVCENTLDARLEV 217
>At3g02260.1 68416.m00207 auxin transport protein (BIG) nearly
identical to auxin transport protein; BIG [Arabidopsis
thaliana] GI:21779966; contains Pfam profiles PF02207:
Putative zinc finger in N-recognin, PF00569: Zinc finger
ZZ type
Length = 5098
Score = 30.7 bits (66), Expect = 0.94
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 378 KGHQTVLRAAGHTYC-AGSLPAHGTHCHHPRPSNRQGSGGVPARKSPN 518
+GH+ V + +C G+ G+ C +P G+G PAR + N
Sbjct: 1613 RGHRVVYSRSSRFFCDCGAGGVRGSSCQCLKPRKYNGNGSAPARGTNN 1660
>At5g26680.1 68418.m03171 endonuclease, putative similar to
Swiss-Prot:P39748 FLAP endonuclease-1 (Maturation factor
1) (MF1) [Homo sapiens]
Length = 453
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -1
Query: 669 DQLQARLQSVADLDTSPGCNQLDSTTGVGRQKVLGVDFQH 550
++LQ + DL GC+ DS G+G Q L + QH
Sbjct: 215 EELQLTMDQFIDLCILSGCDYCDSIRGIGGQTALKLIRQH 254
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 508 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 541
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein similar
to hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 9 ALYRPFFVLVVLKISSSHGAQRCRCSETDQAHDG 110
+LY P + +VLK S + A +CR E ++ +G
Sbjct: 505 SLYHPAYAPIVLKKSQTLQADKCREEENEELDEG 538
>At5g55600.1 68418.m06932 agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
contains Pfam profile PF01426: BAH domain and PF05641:
Agenet domain
Length = 663
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +1
Query: 448 PTVTIRVRQTDKALVESLLGKAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARGR 627
P + + SLLG+ +NK KDVV+K D EN LS + + +
Sbjct: 568 PNIVEEAEPEGEKAYNSLLGE-----QNKEHKDVVVKEDDENKLSKEEDKEVGSNETKTY 622
Query: 628 IKISNTLESRLE 663
+ NT+E E
Sbjct: 623 VNHENTVEDHKE 634
>At5g55540.1 68418.m06919 expressed protein
Length = 1380
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -3
Query: 349 RQVHYVRDL-HELSVPSDELGSACSKIGSSSEVQPASPSFHSI 224
R+ H + +L EL VP+DE A + + ++E++ PSF I
Sbjct: 1084 RRYHDLHNLAQELQVPTDENPEADNHVPVTNELEKVDPSFGGI 1126
>At5g05400.1 68418.m00582 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 874
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 301 LKVLKVREDHVRNVLDEARKRLAEV 375
LK +KV+ED N+LDE ++ L+EV
Sbjct: 54 LKRIKVQEDRGLNLLDEVQQWLSEV 78
>At3g07610.1 68416.m00911 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam domain, PF02373:
jmjC domain
Length = 1027
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -1
Query: 555 QHNILLDLILVVCLGFSE--QGLHQSLVGLTDADGD 454
QH L D++ V CL F E LH+ G TD D
Sbjct: 558 QHGSLKDVVAVDCLDFCEVKVNLHEFFTGYTDGRYD 593
>At2g41990.1 68415.m05194 expressed protein
Length = 297
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Frame = -3
Query: 376 ALQPGACELRQVHYVRDLHELSVPSDELGSACSKIGSSS--EVQPASPSFHS 227
AL P +R ++YV+ V GS CS +GS + SP HS
Sbjct: 16 ALSPPRSAIRPLYYVQSPSNHDVEKMSFGSGCSLMGSPTHPHYYHCSPIHHS 67
>At2g02180.1 68415.m00154 tobamovirus multiplication protein 3
(TOM3) identical to tobamovirus multiplication protein
(TOM3) GI:15425641 from [Arabidopsis thaliana]
Length = 303
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = -1
Query: 381 LWHFSQALASFVKYITYVIFTNFQYLQTSLVQHV 280
++HF + + V+ + +V N Q++Q ++QH+
Sbjct: 85 VFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHI 118
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 508 KAQTDYKNKIKKDVVLKVDTENFLSPDTCGGIELVAARG 624
+++T ++NK K DV L D ++F + G +LVA G
Sbjct: 262 QSKTKHRNKKKNDVYLLPDMKSFKRCNVARGKKLVARGG 300
>At3g58810.2 68416.m06555 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 393
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 382 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 281
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 323 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 356
>At3g58810.1 68416.m06554 zinc transporter, putative similar to zinc
transporter 4; ZnT4 [Mus musculus]
gi|2582990|gb|AAB82593; similar to zinc transporter ZAT
[Arabidopsis thaliana] gi|4206640|gb|AAD11757; member of
the cation diffusion facilitator (CDF) family, or cation
efflux (CE) family, PMID:11500563
Length = 432
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 382 PLALQPGACELRQVHYVRDLHELSVPSDELGSAC 281
P L+ G CE+ +V V +LH ++ +L AC
Sbjct: 362 PTMLEKGVCEIEEVVAVHELHIWAITVGKLLLAC 395
>At1g77010.1 68414.m08968 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 695
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Frame = -3
Query: 358 CELRQVHYVRDLHELSVPSDELG-----SACSKIGS 266
C + + Y +H+L +P+DE+ SAC+ I S
Sbjct: 430 CTVETLEYFHQMHKLDLPTDEVSLSSVISACASISS 465
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,631,536
Number of Sequences: 28952
Number of extensions: 270930
Number of successful extensions: 795
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1447936096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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