Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31472
         (676 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase / i...    30   1.2  
At4g12460.1 68417.m01971 oxysterol-binding family protein simila...    29   3.8  
At2g19390.1 68415.m02262 expressed protein                             29   3.8  
At5g01060.1 68418.m00009 protein kinase family protein contains ...    28   5.0  
At3g59430.2 68416.m06629 expressed protein                             28   5.0  
At3g59430.1 68416.m06628 expressed protein                             28   5.0  
At1g25480.1 68414.m03164 expressed protein contains Pfam profile...    28   5.0  
At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fat...    28   6.6  
At4g14180.1 68417.m02189 expressed protein ; expression supporte...    28   6.6  
At3g03490.1 68416.m00347 peroxisomal protein PEX19 family protei...    28   6.6  
At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS cla...    28   6.6  
At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein ...    28   6.6  
At1g08810.2 68414.m00980 myb family transcription factor (MYB60)       28   6.6  
At1g08810.1 68414.m00981 myb family transcription factor (MYB60)       28   6.6  
At5g49170.1 68418.m06086 expressed protein similar to unknown pr...    27   8.7  
At2g44560.1 68415.m05546 glycosyl hydrolase family 9 protein           27   8.7  

>At5g63980.1 68418.m08033 3'(2'),5'-bisphosphate nucleotidase /
           inositol polyphosphate 1-phosphatase / FIERY1 protein
           (FRY1) (SAL1) identical to SP|Q42546
           3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)
           (3'(2'),5- bisphosphonucleoside 3'(2')-phosphohydrolase)
           (DPNPase) {Arabidopsis thaliana}; identical to cDNA
           inositol polyphosphate 1-phosphatase FIERY1 (FRY1)
           GI:15281147
          Length = 353

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
 Frame = +2

Query: 140 ITTADYNTAVSLILLLEKQSSGS----IIEDTVNNLIRDGNRNVLEFAYKL 280
           +T ADY +   + L+LEK+ S      + E+   +L +DG+++ LE   KL
Sbjct: 42  VTVADYGSQAVVSLVLEKELSSEPFSLVAEEDSGDLRKDGSQDTLERITKL 92


>At4g12460.1 68417.m01971 oxysterol-binding family protein similar
           to SP|P22059 Oxysterol-binding protein 1 {Homo sapiens};
           contains Pfam profiles PF00169: PH domain, PF01237:
           Oxysterol-binding protein
          Length = 694

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +2

Query: 494 ENNRVYFKIYSVRRHQYLKLGTGTDGENDHSVYGDDRAD 610
           E + ++  +Y +R H+Y  LG G   E   S   DD+ +
Sbjct: 238 EASGIHDDVYQLRNHKYSSLGRGKYSECSTSASSDDKQE 276


>At2g19390.1 68415.m02262 expressed protein
          Length = 1211

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +2

Query: 350 SNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVSWKLIPLWENNRVYFKIYSV 529
           +   +++ R+N  ++  AA D D + +  G+ N    E+ +   I  WE +++  K  S+
Sbjct: 213 TRTSMMDVRNNCIVRQSAAVDKDKEIMRVGNHNAVQGEDRTSTGIDGWETSKMKKKRSSI 272

Query: 530 RR--HQYLKLGTGTDGEND 580
               H  L      DG  D
Sbjct: 273 NADCHPNLASNKVVDGYRD 291


>At5g01060.1 68418.m00009 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 499

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 29/132 (21%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
 Frame = +2

Query: 221 TVNNLIRDGNRNVLEFAYKLWIGEGKEI-VKHY----FPVQFRQVLSESNVKIINKRDNL 385
           +  N++ + N +V    YK  +G+G+ I VK +    +P  F + ++E+      + +++
Sbjct: 61  SAGNIVSEHNDSVPNIVYKGKLGDGRRIAVKRFQRLSWPDPF-EFINEAQAVGRLRSEHM 119

Query: 386 AIKLGAAADSDNDRIAYGD--ANDKSSENV-SWKLIPLWENNRVYFKIYSVRRHQYLKLG 556
           A  +G   D DN+R+   +   N   ++++  W+  P+    R+   +++ R  +Y    
Sbjct: 120 ANLIGCCCD-DNERLLVAEYMPNGTLAKHLFHWEKRPMKWEMRLKVALHTARALEYCN-D 177

Query: 557 TGTDGENDHSVY 592
            G D  +D + Y
Sbjct: 178 KGIDLYHDLNPY 189


>At3g59430.2 68416.m06629 expressed protein 
          Length = 451

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 219 IPSTISSETAIGMF*SSPTNC--GSGRVRKSSNTTSLFSLDRCYPRATSRSST 371
           IP   S E+   +  SS   C  G+G    SS   +  S   C PR TSRSST
Sbjct: 350 IPKNPSMESFQIVGNSSTVICPRGAGSELSSSEAEAYHSNQPCSPRKTSRSST 402


>At3g59430.1 68416.m06628 expressed protein 
          Length = 451

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +3

Query: 219 IPSTISSETAIGMF*SSPTNC--GSGRVRKSSNTTSLFSLDRCYPRATSRSST 371
           IP   S E+   +  SS   C  G+G    SS   +  S   C PR TSRSST
Sbjct: 350 IPKNPSMESFQIVGNSSTVICPRGAGSELSSSEAEAYHSNQPCSPRKTSRSST 402


>At1g25480.1 68414.m03164 expressed protein contains Pfam profile
           PF01027: Uncharacterized protein family UPF0005
          Length = 548

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 593 HKRYGRFHHPYPFQVSSIGAYEHC 522
           H  Y  FHHP+   V   GA  HC
Sbjct: 305 HGPYKTFHHPWANYVKLSGAVRHC 328


>At4g29010.1 68417.m04147 abnormal inflorescence meristem 1 / fatty
           acid multifunctional protein (AIM1) identical to
           gi:4337025; contains Pfam profiles PF02737
           (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain),
           PF00378 (enoyl-CoA hydratase/isomerase family protein),
           PF00725 (3-hydroxyacyl-CoA dehydrogenase)
          Length = 721

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +2

Query: 50  CVLAASAGLIDLDINILSAPTRAETRLVDAITTADYNTAVSLILLLEKQSSGSIIED 220
           C+LA++   IDLD  ++   T ++ R+V A   +  +    L ++  K +S  +I D
Sbjct: 418 CILASNTSTIDLD--VIGEKTNSKDRIVGAHFFSPAHLMPLLEIVRSKNTSAQVILD 472


>At4g14180.1 68417.m02189 expressed protein ; expression supported
           by MPSS
          Length = 1268

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +2

Query: 170 SLILLLEKQSSGSIIEDTVNNLIRDGNRNVLEFAYKLWIGEG 295
           SLI  ++K S  ++I + V+N+  DG +  L + +   I EG
Sbjct: 713 SLIYQIQKISRNNLIGNEVHNVYGDGRQRSLTYWFAKLISEG 754


>At3g03490.1 68416.m00347 peroxisomal protein PEX19 family protein
           contains Pfam profile: PF04614 Pex19 protein family
          Length = 248

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
 Frame = -1

Query: 238 DEIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSIDEPRFRSGRSGQNVNV-QVNKTGAG 62
           DE++D  LDD        Q+NQR ++         +     SG  G  + +  +     G
Sbjct: 10  DELLDSALDDFKDLNLSHQRNQREAQEEEEKKRKEETVLLPSGVQGLGMGLPDMRSKKRG 69

Query: 61  RQHAGREKHQKLHLDSL 11
           +Q   +E H    LD L
Sbjct: 70  KQKVSKEDHVAEALDKL 86


>At1g72890.1 68414.m08431 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 235 EIVDGILDDASTRLFLEQQNQRNSRVVIGSGDSIDE 128
           ++VDGI +  ST+LF E+   RN  ++IG    + E
Sbjct: 189 KLVDGITEKISTKLFSEK--PRNDNILIGIDQHMGE 222


>At1g24625.1 68414.m03099 zinc finger (C2H2 type) family protein
           (ZFP7) identical to zinc finger protein, ZFP7
           gi|790685|gb|AAA87303; contains Pfam domain, PF00096:
           Zinc finger, C2H2 type
          Length = 209

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 599 HLHKRYGRFHHPYPFQVSSIGAYEH 525
           H+ + +G  H PY +  SS+G   H
Sbjct: 93  HMGRMFGHHHRPYTYTSSSLGMQAH 117


>At1g08810.2 68414.m00980 myb family transcription factor (MYB60)
          Length = 197

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/63 (23%), Positives = 36/63 (57%)
 Frame = +2

Query: 305 VKHYFPVQFRQVLSESNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVSWKLI 484
           +K+Y+    ++ L++S+    ++ +N+A++  +  ++ N R  Y      S+EN+S +L+
Sbjct: 21  IKNYWNTHLKKKLNKSDSDERSRSENIALQTSSTRNTINHRSTYA----SSTENIS-RLL 75

Query: 485 PLW 493
             W
Sbjct: 76  EGW 78


>At1g08810.1 68414.m00981 myb family transcription factor (MYB60)
          Length = 280

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/63 (23%), Positives = 36/63 (57%)
 Frame = +2

Query: 305 VKHYFPVQFRQVLSESNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVSWKLI 484
           +K+Y+    ++ L++S+    ++ +N+A++  +  ++ N R  Y      S+EN+S +L+
Sbjct: 104 IKNYWNTHLKKKLNKSDSDERSRSENIALQTSSTRNTINHRSTYA----SSTENIS-RLL 158

Query: 485 PLW 493
             W
Sbjct: 159 EGW 161


>At5g49170.1 68418.m06086 expressed protein similar to unknown
           protein (gb|AAF63814.1)
          Length = 185

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
 Frame = +2

Query: 323 VQFRQVLSESNVKIINKRDNLAIKLGAAADSDNDRIAYGDANDKSSENVSWKLIPLWENN 502
           + + QVL E+     +  D    KL      D+  +     ++K+     W    LW  N
Sbjct: 27  IHYFQVLEEAKKHKSSSIDTFQFKLQKPISKDD--LIRTTLHNKNKNKKRW----LWCKN 80

Query: 503 RVYFKIYSVRRHQYLKLGTGT-DGENDHSVYGDDRADTH 616
            ++F  +  R+        G   GEND     DDR+D H
Sbjct: 81  ALFF--FKWRKWPISSAVVGRCSGENDGDNEFDDRSDVH 117


>At2g44560.1 68415.m05546 glycosyl hydrolase family 9 protein 
          Length = 491

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 551 LGTGTDGENDHSVYGDDRAD 610
           +G    G ND+ VYGD+R D
Sbjct: 450 MGAVVGGPNDNDVYGDERTD 469


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,016,786
Number of Sequences: 28952
Number of extensions: 292872
Number of successful extensions: 957
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 957
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)