Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31470
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g25870.1 68418.m03069 hypothetical protein 38 0.006
At1g73860.1 68414.m08552 kinesin motor protein-related similar t... 37 0.013
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 36 0.022
At1g45976.1 68414.m05206 expressed protein 33 0.16
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 33 0.21
At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit... 33 0.21
At3g58940.1 68416.m06568 F-box family protein contains F-box dom... 32 0.36
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 32 0.36
At3g28770.1 68416.m03591 expressed protein 32 0.48
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 31 0.63
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 31 0.84
At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18) 31 0.84
At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transfera... 31 1.1
At5g26350.1 68418.m03150 hypothetical protein 30 1.9
At5g48600.1 68418.m06011 structural maintenance of chromosomes (... 29 2.6
At5g27860.1 68418.m03342 expressed protein 29 2.6
At3g25840.1 68416.m03219 protein kinase family protein contains ... 29 2.6
At1g65440.1 68414.m07424 glycine-rich protein 29 2.6
At5g16780.1 68418.m01965 SART-1 family protein contains Pfam dom... 29 3.4
At3g54670.1 68416.m06049 structural maintenance of chromosomes (... 29 3.4
At3g43800.1 68416.m04681 glutathione S-transferase, putative glu... 29 3.4
At3g05830.1 68416.m00654 expressed protein 29 3.4
At2g41960.1 68415.m05191 expressed protein 29 3.4
At1g03080.1 68414.m00282 kinase interacting family protein simil... 29 3.4
At5g42880.1 68418.m05226 hypothetical protein contains Pfam prof... 29 4.5
At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing ... 29 4.5
At1g76780.1 68414.m08935 expressed protein ; expression supporte... 29 4.5
At1g56660.1 68414.m06516 expressed protein 29 4.5
At1g11740.1 68414.m01347 ankyrin repeat family protein contains ... 29 4.5
At5g48040.1 68418.m05936 hypothetical protein 28 5.9
At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit (... 28 5.9
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 28 5.9
At3g29075.1 68416.m03637 glycine-rich protein 28 5.9
At3g27710.1 68416.m03460 zinc finger protein-related contains si... 28 5.9
At1g68790.1 68414.m07863 expressed protein 28 5.9
At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to autop... 28 5.9
At1g09470.1 68414.m01059 expressed protein ; expression supporte... 28 5.9
At5g14270.1 68418.m01669 DNA-binding bromodomain-containing prot... 28 7.8
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 28 7.8
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 28 7.8
At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains... 28 7.8
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 38.3 bits (85), Expect = 0.006
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -3
Query: 751 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKE--LKERQKQQLRHKALKKGLD 587
K + +E+ E +VKLE + Y+LEE + R++ +KE LK + K++L+ + K L+
Sbjct: 69 KEHDEFEEISEILVKLEKKYYELEEVENRENLQMKEKTLKRKYKRELKKSSKIKELE 125
>At1g73860.1 68414.m08552 kinesin motor protein-related similar to
kinesin-C GB:AAF04841 from [Strongylocentrotus
purpuratus]
Length = 1030
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/87 (28%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Frame = -3
Query: 709 KLETEKYDLEERQKRQDYDL-KELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVAS-K 536
++ETEK EE++K ++ D+ K +K+ + L ALK+ L+ T K + Q + +
Sbjct: 212 QIETEKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELE----TTKRKYEQQYSQIE 267
Query: 535 YERRVDTRSYDDKKKLFEGDLEKLNKD 455
+ + + ++++KK E D++KL K+
Sbjct: 268 SQTKTEKSKWEEQKKNEEEDMDKLLKE 294
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094) [Homo
sapiens]
Length = 927
Score = 36.3 bits (80), Expect = 0.022
Identities = 31/140 (22%), Positives = 64/140 (45%)
Frame = -3
Query: 760 SVDKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 581
S++K RQ+A E + + + E LE R + + +++EL+ + KQ+L+ L L +
Sbjct: 700 SLEKERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRELRRKHKQELQEVLLHNELIQK 759
Query: 580 ALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQK 401
L + ++ + + R+++ + ++ + + N F EK A K
Sbjct: 760 DLEREKASRLDL--ERTARINSSAVSEQLPIARQNSAFENDKFSEKRSMPEATMSPYYMK 817
Query: 400 ARLPKWFGERPGKKKGELES 341
+ P + +K+GEL S
Sbjct: 818 SITPSAYEATLRQKEGELAS 837
>At1g45976.1 68414.m05206 expressed protein
Length = 325
Score = 33.5 bits (73), Expect = 0.16
Identities = 24/89 (26%), Positives = 40/89 (44%)
Frame = -3
Query: 688 DLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRS 509
D++ +RQD D+ + Q QLRH L K + T + V E+ +
Sbjct: 138 DIDRELQRQDADIDRFLKIQGDQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELER 197
Query: 508 YDDKKKLFEGDLEKLNKDFLEKVWQERAE 422
+ K K E +E+L + + WQ+RA+
Sbjct: 198 INRKNKELEVRMEQLTME--AEAWQQRAK 224
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 33.1 bits (72), Expect = 0.21
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Frame = -3
Query: 754 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL 575
D+L EL E VK ++ + +L E K+ + KEL+E +K L KG++ + L
Sbjct: 522 DELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKGMEKQIL 581
Query: 574 TGKHPPKIQVASKYERRVDTRSYDDKKK---LFEGDLEKLN 461
+ K + + E V +S D+ K + +LEK+N
Sbjct: 582 MEREARK-SLETDLEEAV--KSLDEMNKNTSILSRELEKVN 619
>At1g60900.1 68414.m06856 U2 snRNP auxiliary factor large subunit,
putative similar to U2 snRNP auxiliary factor, large
subunit GB:CAA77136 from [Nicotiana plumbaginifolia]
Length = 589
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/64 (28%), Positives = 33/64 (51%)
Frame = -2
Query: 716 HRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQ 537
HR++RDR+ R R+ +R++ ++++ +E +S E R +S HR S S
Sbjct: 127 HRRSRDRDRRRSRDRDREVRHRRRSRSRSRSRSERRSRSE-HRHKSEHRSRSRSRSRSKS 185
Query: 536 VREA 525
R +
Sbjct: 186 KRRS 189
>At3g58940.1 68416.m06568 F-box family protein contains F-box domain
Pfam:PF00646
Length = 618
Score = 32.3 bits (70), Expect = 0.36
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -3
Query: 733 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQL 617
QE+ + ++++ E DL+ERQ+ Q+ L +LKER + L
Sbjct: 486 QEMSQDYLQMQLEVADLKERQRDQEAKLADLKERLRAML 524
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = -3
Query: 712 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 620
+KLE EK + EE+Q +QD DL +L+ + +Q
Sbjct: 233 LKLELEKAEKEEQQAKQDSDLAKLRVEEMEQ 263
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 31.9 bits (69), Expect = 0.48
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Frame = -3
Query: 703 ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVASKYER 527
+++K ++++++K+ D ++ KE++ ++ K LKK D + T K Q +K E+
Sbjct: 1172 KSQKNEVDKKEKKSSKDQQKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKETKKEK 1231
Query: 526 RVDTRSYDDKK---KLFEGDLEKLNKDFLEKVWQERAE 422
+ DDKK K G E + + E Q++++
Sbjct: 1232 ---NKPKDDKKNTTKQSGGKKESMESESKEAENQQKSQ 1266
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 31.5 bits (68), Expect = 0.63
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Frame = -2
Query: 710 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPR----SAHRQAPAQNSSS 543
+ R RE +RE + R + QRK + E + +E R R + R+ Q
Sbjct: 561 EARKREEERKREEEMAKRREQERQRKEREEVERKIREEQERKREEEMAKRREQERQKKER 620
Query: 542 VQVREACRHTILRRQKETVRG*PRETEQGLPREGVAREGR 423
++ R R+++E + E Q RE V R+ R
Sbjct: 621 EEMERKKREEEARKREEEMAKIREEERQRKEREDVERKRR 660
Score = 29.1 bits (62), Expect = 3.4
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Frame = -3
Query: 682 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPP-KIQVASKYERRVDTRSY 506
EER+K ++ K +ERQ+++ K+ + E + K + K E + R
Sbjct: 521 EEREKEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERKREEEMAKRRE 580
Query: 505 DDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 341
++++ + E++ + E+ ++R E+ R++ K E +KK E E+
Sbjct: 581 QERQR---KEREEVERKIREEQERKREEEMAKRREQERQKKEREEMERKKREEEA 632
Score = 27.9 bits (59), Expect = 7.8
Identities = 26/101 (25%), Positives = 44/101 (43%)
Frame = -2
Query: 704 RDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVREA 525
++ E+ +RE + + +RK + E + +E +R R R+ + + RE
Sbjct: 525 KEEEMAKKREEERQRKEREEVERKRREEQERKRREEEARKREEERK---REEEMAKRREQ 581
Query: 524 CRHTILRRQKETVRG*PRETEQGLPREGVAREGRTVRRQAK 402
R R+++E V RE EQ RE + R RQ K
Sbjct: 582 ERQ---RKEREEVERKIRE-EQERKREEEMAKRREQERQKK 618
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 31.1 bits (67), Expect = 0.84
Identities = 26/120 (21%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = -3
Query: 688 DLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEAL----TGKHPPKIQVASKYERRV 521
+LEE+ + + D++E E K+Q ++A K + + + P K+ SK V
Sbjct: 269 ELEEKLIKNEDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESV 328
Query: 520 DTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGKKKGELES 341
+ + + ++++ E E++ ++ EK + +Q ++ K G+ +K E ES
Sbjct: 329 EETTQEKEEEVKEEGKERVEEEEKEKEKVKEDDQKEKVEEEEKEKVKGDEEKEKVKEEES 388
>At5g05450.1 68418.m00587 DEAD/DEAH box helicase, putative (RH18)
Length = 593
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/66 (22%), Positives = 34/66 (51%)
Frame = -3
Query: 712 VKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKY 533
VK E K+ + R+K++ +L+ KE+++++ + K +K +D A ++ K
Sbjct: 491 VKFEEIKFKDKYREKQRQQNLQVRKEKRQEEKKEKGKRKRVDASASNDPKKASRKLTGKQ 550
Query: 532 ERRVDT 515
+ + T
Sbjct: 551 RQTIQT 556
>At2g43820.1 68415.m05447 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 449
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = -3
Query: 733 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLD 587
Q++W+ V+++TEK +++ ++ +KE+ E ++ + K +KK D
Sbjct: 375 QDVWKAGVRVKTEKESGIAKREEIEFSIKEVMEGERSKEMKKNVKKWRD 423
>At5g26350.1 68418.m03150 hypothetical protein
Length = 126
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 28/43 (65%)
Frame = -3
Query: 754 DKLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 626
+KL ++ ++L + +LE EK LEE +K+ ++++ ER+K
Sbjct: 58 NKLEEEKKKLEKEKKQLEEEKKQLEEEKKQLEFEVMGANEREK 100
>At5g48600.1 68418.m06011 structural maintenance of chromosomes
(SMC) family protein similar to SP|P50532 Chromosome
assembly protein XCAP-C {Xenopus laevis}; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1241
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = -3
Query: 706 LETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYER 527
L+ + L++ + + D +ELK+ + +HK ++ LD E K K +
Sbjct: 283 LQNLENSLKDERVKMDESNEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKH 342
Query: 526 RVDTRSYDDKKKLFEGDLEK 467
R D + K K E LEK
Sbjct: 343 REDLKHVKQKIKKLEDKLEK 362
>At5g27860.1 68418.m03342 expressed protein
Length = 177
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/98 (21%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
Frame = -2
Query: 716 HRQTRDREIRSRREAKETGLRLKRAQRKT-KAATEAQSSQEGSRPRSAHRQAPAQNSSSV 540
HR+ +DR R + L++++ R T K Q S + S + + + +S
Sbjct: 20 HRRRKDRRHHRRNDRDRDSLKVRKKSRSTSKKRRRRQHSSDSSDSSYSDSSSESSDSEHE 79
Query: 539 QVREACRHTILRRQKETVRG*PRETEQGLPREGVAREG 426
+ R +H ++ K+ R ++ RE EG
Sbjct: 80 KSRRHKKHEKPKKAKDKERSKSHRHKRHKNRERKKGEG 117
>At3g25840.1 68416.m03219 protein kinase family protein contains
Pfam profile: PF00069 eukaryotic protein kinase domain
Length = 935
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -2
Query: 704 RDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVRE 528
R+RE RRE + R K +R+ + + +EG R A+ + +++ + RE
Sbjct: 288 REREREKRREIESDRERRKEKERERSIDRDRRKEREGDYLRDRANERGRSRDRTRYNSRE 347
Query: 527 ACRHTILRRQKETVRG*PRETEQ 459
R +K+ RG RET++
Sbjct: 348 RKREKEREGEKDWERG--RETQK 368
>At1g65440.1 68414.m07424 glycine-rich protein
Length = 1647
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = -3
Query: 715 IVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPE 581
IV E E+ + EE ++R+D D +ERQK++ + K +GLD +
Sbjct: 52 IVNDEDEEEEEEEDEERKDSD----EERQKKKKKRKKKDEGLDED 92
>At5g16780.1 68418.m01965 SART-1 family protein contains Pfam
domain, PF03343: SART-1 family
Length = 820
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = -3
Query: 682 EERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKI-QVASKYERRVDTRSY 506
+ER+K + D + K+++K++ RHK + D E K ++ + ASK D ++
Sbjct: 84 KEREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETH 143
Query: 505 DDKKKLFEGDLEKLNK 458
++ D LN+
Sbjct: 144 KAAERYEHSDNRGLNE 159
>At3g54670.1 68416.m06049 structural maintenance of chromosomes
(SMC) family protein similar to SMC1 protein [Bos
taurus] GI:4235253, 14S cohesin SMC1 subunit (SMC
protein) [Xenopus laevis] GI:3328231; contains Pfam
profiles PF02483: SMC family C-terminal domain, PF02463:
RecF/RecN/SMC N terminal domain
Length = 1257
Score = 29.1 bits (62), Expect = 3.4
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 8/97 (8%)
Frame = -3
Query: 712 VKLETEKYDLE--ERQKRQDYDLKELKERQKQQLRHKALKKG-LDPEALTGKHPPKIQVA 542
V E EK++ E +R+ Q LKE+ +R+K ++ K+ K G + PE L K +
Sbjct: 262 VMRELEKFEREAGKRKVEQAKYLKEIAQREK-KIAEKSSKLGKIQPELLRFK-----EEI 315
Query: 541 SKYERRVDTRSYD-DKKKLFEG----DLEKLNKDFLE 446
++ + +++T D DK+K +G ++E++ K E
Sbjct: 316 ARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKE 352
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = -3
Query: 733 QELWECIVKLETEKYDLEERQKRQDYDLKELKERQK 626
+E+ K+ET + D+++R+K + KE+++ QK
Sbjct: 313 EEIARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQK 348
>At3g43800.1 68416.m04681 glutathione S-transferase, putative
glutathione transferase, papaya, PIR:T09781
Length = 227
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 96 KLMDWLQNCRTRPA 137
KLMDW++ C TRPA
Sbjct: 186 KLMDWIRKCLTRPA 199
>At3g05830.1 68416.m00654 expressed protein
Length = 336
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = -3
Query: 748 LRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKE--RQKQQLRHKALKK 596
L++K +L C+ + ++ L+ + +R+D ++KE+++ +KQ L +++ K
Sbjct: 258 LKKKVLKLEFCLQEARSQTRKLQRKGERRDMEIKEIRDLISEKQNLNNESWDK 310
>At2g41960.1 68415.m05191 expressed protein
Length = 1215
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Frame = -3
Query: 760 SVDKLRQKAQELWECIVKLETEKYDLEE--RQKRQDYDLKE---LKERQKQQLRHKALKK 596
S + L Q+ + IV LE + LEE ++KR++ + KE +KER+K+ R + LK+
Sbjct: 476 SSELLEQRVHIACKEIVTLEKQNKLLEEEEKEKREEEERKERKRIKEREKKLRRKERLKE 535
>At1g03080.1 68414.m00282 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1744
Score = 29.1 bits (62), Expect = 3.4
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = -3
Query: 760 SVDKLRQKAQELWECIVKLETE---KYDLEERQKRQDYDLK-ELKE--RQKQQLRHKALK 599
S+ L+++ +L E I KLE E + D +++ Y LK EL + ++ Q + +
Sbjct: 564 SIKSLQEEVSKLRETIQKLEAEVELRVDQRNALQQEIYCLKEELSQIGKKHQSMVEQVEL 623
Query: 598 KGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNK 458
GL PE+ G ++Q + + + R +K L E LE + K
Sbjct: 624 VGLHPESF-GSSVKELQEENSKLKEIRERESIEKTALIE-KLEMMEK 668
>At5g42880.1 68418.m05226 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 751
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/31 (35%), Positives = 22/31 (70%)
Frame = -3
Query: 712 VKLETEKYDLEERQKRQDYDLKELKERQKQQ 620
+KLE EK + EE+Q +QD +L +++ + ++
Sbjct: 212 LKLELEKAEKEEQQAKQDSELAQMRVEEMEK 242
>At5g09880.1 68418.m01142 RNA recognition motif (RRM)-containing
protein
Length = 527
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = -2
Query: 740 EGPGTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPR--SAHRQ 567
E G R R RE R+ +E G + + R K+ + + + G R R HR
Sbjct: 24 EESGNERSERSYRKRE-GGERQGEEGGEEERVSSRSKKSRGDGEENGGGKRDRERERHRS 82
Query: 566 APAQNSSSVQVREACRHTILRRQKETVRG*PRETEQGLPREGVAREGRTVRRQAK 402
+ ++ +VRE R R++ + + ++ RE RE R+ R +
Sbjct: 83 SRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRR 137
>At1g76780.1 68414.m08935 expressed protein ; expression supported
by MPSS
Length = 1871
Score = 28.7 bits (61), Expect = 4.5
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Frame = -3
Query: 754 DKLRQKAQELWECIVKLETEKYDLEERQKRQDY--DLKELKERQKQQLRHKALKKGLDPE 581
DK+ +++++ + KL+ + QKR D ++KEL+E Q + L P
Sbjct: 439 DKVGAQSEDI--SLTKLQEIGEQQFQGQKRHDKQENIKELREGQASEAEKNIKNDILKPV 496
Query: 580 ALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQK 401
+ KIQ + E Y++ K+ E +K+N+D KV QE Q +
Sbjct: 497 QKRSEGKHKIQKTFQEETNKQPEGYNE--KIMETG-KKINEDGTRKV-QEMIRQQELDEP 552
Query: 400 ARLPK 386
AR K
Sbjct: 553 ARSEK 557
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 4.5
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = -3
Query: 709 KLETEKYDLEERQKRQDYDLKELKE-RQKQQLRHKALK-KGLDPEALTGKHPPKIQVASK 536
K E ++ EE++K+ D + KE E +K+ + K K KG PE K A++
Sbjct: 252 KKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKLKGKKGKGEKPEKEDEGKKTKEHDATE 311
Query: 535 YERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAE 422
E + + + KK D K + +++V ++ +
Sbjct: 312 QEMDDEAADHKEGKKKKNKDKAKKKETVIDEVCEKETK 349
>At1g11740.1 68414.m01347 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 624
Score = 28.7 bits (61), Expect = 4.5
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = -2
Query: 689 RSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQA-PAQNSSSVQVREACRHT 513
+SR+ KE GLRL +R Q ++ R S A NSS +++E
Sbjct: 311 KSRKVGKEQGLRLDETRRSVSEPLRPQRREQRRRSVSLPEAAILVANSSVGRIKEKEIVK 370
Query: 512 ILRRQKETVRG*PRETEQGLP-REGVAREGRTVRR 411
LR P +TE+ LP + +A + VRR
Sbjct: 371 SLRPSVWLTDQFPLKTEELLPLLDILANHVKAVRR 405
>At5g48040.1 68418.m05936 hypothetical protein
Length = 422
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 604 LKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLF----EGDLEKLNKDFLEKVW 437
L++ D L KHP ++V K+ ++ D + L+ E DLEK N VW
Sbjct: 335 LREAYDRRHLIEKHP-LVEVREKFANMMNEGFLDRSRGLYQKSVEADLEKNNIKTSYPVW 393
Query: 436 QERAEQ 419
+ E+
Sbjct: 394 SDEEEE 399
>At5g44030.1 68418.m05388 cellulose synthase, catalytic subunit
(IRX5) nearly identical to cellulose synthase
[Arabidopsis thaliana] GI:27462651; contains Pfam
profile PF03552: Cellulose synthase
Length = 1049
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = -3
Query: 541 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQERAEQFGGRQKARLPKWFGERPGK 362
SK + R + R++ + D E + + W+ER +++ RQ+ R GE+ +
Sbjct: 123 SKQQWRPNGRAFSSTGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNE 182
Query: 361 KKGELE 344
K + E
Sbjct: 183 DKEDDE 188
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Frame = -3
Query: 697 EKYDLEERQKRQDYDLKELKERQKQQLR-HKALKKGLDPEAL-TGKHPPKI--QVASKYE 530
E L + +R + +L+E KER +QQL+ K+ + L+ A K + ++ +
Sbjct: 288 ENQQLRQMMERVETELRETKERLEQQLKEEKSARLELEKRAKEVEKRSSDVVKELNDEQA 347
Query: 529 RRVDTRS-YDDKKKLFEGDLEKLNKD 455
+R+++ S + K G +E LNK+
Sbjct: 348 KRLESESRAKEAVKQSNGVVENLNKE 373
>At3g29075.1 68416.m03637 glycine-rich protein
Length = 294
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -3
Query: 703 ETEKYDLEERQKRQDYDLKELKERQKQQLRHKALKKGLDPEALTGKHPPKIQVASKYERR 524
E + D ++ +DYD + K ++K++ + K KK D K + +Y+
Sbjct: 139 EDDGDDGHKKHSGKDYDDGDEKSKKKEKEKKKDKKK--DGNNSEDDEFKKKKKKEQYKEH 196
Query: 523 VDTRSYDDKKK 491
D YD+KKK
Sbjct: 197 HDDDDYDEKKK 207
>At3g27710.1 68416.m03460 zinc finger protein-related contains
similarity to zinc finger proteins and Pfam domain,
PF01485: IBR domain
Length = 537
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 25/37 (67%)
Frame = -3
Query: 541 SKYERRVDTRSYDDKKKLFEGDLEKLNKDFLEKVWQE 431
S+ ER + ++D+++ EG++EKL+K LE+ + E
Sbjct: 429 SEKEREIKKNLFEDQQQQLEGNVEKLSK-ILEEPFDE 464
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 740 EGP-GTLGVHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQA 564
EGP G+L ++ D+ R R + G ++ + TKA + +G PR R+
Sbjct: 838 EGPEGSLQSEMKS-DKPRRGRGRGRGRGKSVRGRSQATKAVSRDSKPSDGETPRKRQREQ 896
Query: 563 PAQNSSSVQ 537
++ + S Q
Sbjct: 897 TSRITESEQ 905
>At1g62040.1 68414.m06997 autophagy 8c (APG8c) identical to
autophagy 8c [Arabidopsis thaliana] GI:19912155;
contains Pfam profile PF02991: Microtubule associated
protein 1A/1B, light chain 3
Length = 119
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 622 QLRHKALKKGLDPEALTGKHPPKIQVASKYERRVDTRSYDDKKKLFEGDL 473
+L H ++ ++ + K+P +I V + R D + D KK L DL
Sbjct: 7 KLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADL 56
>At1g09470.1 68414.m01059 expressed protein ; expression supported
by MPSS
Length = 336
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/49 (26%), Positives = 29/49 (59%)
Frame = -3
Query: 751 KLRQKAQELWECIVKLETEKYDLEERQKRQDYDLKELKERQKQQLRHKA 605
+L++K +L C+ + + L++ +R D ++ELKE+ + +H+A
Sbjct: 257 ELKKKVLKLEFCLRETRIQTRKLQKMGERNDVAIQELKEQLAAKKQHEA 305
>At5g14270.1 68418.m01669 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 688
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = -2
Query: 710 QTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSVQVR 531
Q + + R + EAK ++A+ + A A++ ++ R A RQA + SV++
Sbjct: 550 QKKKEKARLQAEAKAAEEARRKAEAQAAAEAAAEAKRKLELEREAARQALMEMEQSVELN 609
Query: 530 E 528
E
Sbjct: 610 E 610
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 701 DREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVREA 525
DRE + R+ + R+KR +R + + + + SS S S A+ + ++SSS +
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDSESEAYSSSSYESSSSSDGKHR 264
Query: 524 CRHTILRRQ 498
R + R +
Sbjct: 265 KRKSTTRHK 273
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -2
Query: 701 DREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRS-AHRQAPAQNSSSVQVREA 525
DRE + R+ + R+KR +R + + + + SS S S A+ + ++SSS +
Sbjct: 205 DREAKETRKKESNEKRIKRKRRYSSSDSYSSSSDSDSDSESEAYSSSSYESSSSSDGKHR 264
Query: 524 CRHTILRRQ 498
R + R +
Sbjct: 265 KRKSTTRHK 273
>At2g03150.1 68415.m00268 ATP/GTP-binding protein family contains
ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
Length = 1340
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/73 (28%), Positives = 34/73 (46%)
Frame = -2
Query: 719 VHRQTRDREIRSRREAKETGLRLKRAQRKTKAATEAQSSQEGSRPRSAHRQAPAQNSSSV 540
+ R+ ++R+ RE K L +KR + T AT + + P+S R A SSS+
Sbjct: 404 LERREKERQGERERERKRA-LEIKRDRTPTARATSKDTKERTPVPKSISRDA---RSSSL 459
Query: 539 QVREACRHTILRR 501
+ R +RR
Sbjct: 460 RRDAHHREASIRR 472
Score = 27.9 bits (59), Expect = 7.8
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Frame = -3
Query: 697 EKYDLEERQKRQDYDLKELKERQK--QQLRHKALKKGLDPEALTGKHPPKIQVASKYERR 524
EK +E +K D E+K + + ++ + K +D + TG K + + +
Sbjct: 861 EKKVMEVGKKSSDSGSVEMKPTAESLEDVKDENASKTVDVKQETGSPDTKKKEGASSSSK 920
Query: 523 VDTRSYDDKKKLFEGDLEKLN------------KDFLEKVWQERAEQFGGRQKARL 392
DT++ +DKK + + E ++ K+ EKV ++ ++ GG+ ++R+
Sbjct: 921 KDTKTGEDKKAEKKNNSETMSEGKKIDRNNTDEKEVKEKVTEKEIKERGGKDESRI 976
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,987,427
Number of Sequences: 28952
Number of extensions: 173235
Number of successful extensions: 1048
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -