Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0783
         (830 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Y025 Cluster: Putative uncharacterized protein OJ1112...    35   2.9  
UniRef50_Q9FGR7 Cluster: Similarity to salt-inducible protein; n...    34   3.8  
UniRef50_Q017B0 Cluster: DNA topoisomerase; n=3; Ostreococcus|Re...    33   6.6  

>UniRef50_Q7Y025 Cluster: Putative uncharacterized protein
           OJ1112_G08.12; n=4; Oryza sativa|Rep: Putative
           uncharacterized protein OJ1112_G08.12 - Oryza sativa
           subsp. japonica (Rice)
          Length = 612

 Score = 34.7 bits (76), Expect = 2.9
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = -1

Query: 398 REQWQAQGSVETVPLGSVQSNQTNSADKSTVPDDA 294
           R+QW+   S +++P G  +S  T+SA+ ST PD++
Sbjct: 161 RKQWEKAASRKSMPQGFRKSTSTSSAESSTQPDES 195


>UniRef50_Q9FGR7 Cluster: Similarity to salt-inducible protein; n=2;
           core eudicotyledons|Rep: Similarity to salt-inducible
           protein - Arabidopsis thaliana (Mouse-ear cress)
          Length = 723

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 16/43 (37%), Positives = 27/43 (62%)
 Frame = -2

Query: 445 PI*QTTTNLLNHYKSSGNSGKRKEVWKLCHWAQSKATKQTQPT 317
           P  +T T++L+ ++ SG++GK  E+WKL    + K T+ T  T
Sbjct: 518 PSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNT 560


>UniRef50_Q017B0 Cluster: DNA topoisomerase; n=3; Ostreococcus|Rep:
           DNA topoisomerase - Ostreococcus tauri
          Length = 1006

 Score = 33.5 bits (73), Expect = 6.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = -3

Query: 414 TTTNHQGTVASARKCGNCATGLSPKQPNKLSRQVNCPR 301
           T+TN    V+ ARKC +C TG    +P+K    + C R
Sbjct: 672 TSTNDAQEVSDARKCPSCKTGRLGLKPSKSGGFIGCSR 709


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,456,012
Number of Sequences: 1657284
Number of extensions: 16117897
Number of successful extensions: 36217
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36207
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 72143915536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)