Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0777
         (814 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q16S98 Cluster: Putative uncharacterized protein; n=1; ...    49   2e-04
UniRef50_UPI00003BFF1F Cluster: PREDICTED: hypothetical protein;...    41   0.032
UniRef50_Q29LF9 Cluster: GA12922-PA; n=1; Drosophila pseudoobscu...    37   0.53 
UniRef50_A3J5L5 Cluster: Transcriptional regulator, GntR family ...    36   0.92 
UniRef50_Q9VPZ2 Cluster: CG14342-PA; n=2; Drosophila melanogaste...    35   2.1  
UniRef50_A2E2R7 Cluster: Putative uncharacterized protein; n=1; ...    34   4.9  

>UniRef50_Q16S98 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 127

 Score = 48.8 bits (111), Expect = 2e-04
 Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
 Frame = +2

Query: 221 SKIGCQHI-PIIPKLGLAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHR 397
           SKI    + P   +  + Y VVCR RYH  K+   KQF  EL   E +Q +A D +R HR
Sbjct: 24  SKISNDSVYPSYSEFKVTYPVVCRQRYHQDKLRYDKQFEYELKMLELMQNSAYDSMRFHR 83

Query: 398 EFS 406
            F+
Sbjct: 84  HFA 86


>UniRef50_UPI00003BFF1F Cluster: PREDICTED: hypothetical protein;
           n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
           - Apis mellifera
          Length = 137

 Score = 41.1 bits (92), Expect = 0.032
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +2

Query: 272 YRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHREFSQGI 415
           Y V+CRHR    +   R+Q  + +  F  +Q  A+D VR+ R FS GI
Sbjct: 64  YYVICRHRVQKTRKQIRRQMNRNIMHFAMMQMFAIDSVRIDRVFSFGI 111


>UniRef50_Q29LF9 Cluster: GA12922-PA; n=1; Drosophila
           pseudoobscura|Rep: GA12922-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 111

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +2

Query: 266 LAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHR 397
           + Y  +CR RY  A     ++F +E+   E++Q  A+D +RVHR
Sbjct: 48  ITYADICRQRYTAAFRRYNERFRREMAQHEEMQRCAIDAMRVHR 91


>UniRef50_A3J5L5 Cluster: Transcriptional regulator, GntR family
           protein; n=1; Flavobacteria bacterium BAL38|Rep:
           Transcriptional regulator, GntR family protein -
           Flavobacteria bacterium BAL38
          Length = 505

 Score = 36.3 bits (80), Expect = 0.92
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = +2

Query: 557 EYCNLSFVA*TVKEITHKTSLHVNEKHGRNHISQFP*SMCFL 682
           E+CNL  VA   K ++ K  L + +K   ++I  FP SMC+L
Sbjct: 427 EFCNLHVVAKFKKNVSEKEELEIIKKLSLHNIVTFPLSMCYL 468


>UniRef50_Q9VPZ2 Cluster: CG14342-PA; n=2; Drosophila
           melanogaster|Rep: CG14342-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 150

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 224 KIGCQHIPIIPKLGLAYRVVCRHRYHWAKVAQRKQFMKELHSFEKLQANALDGVRVHR 397
           ++G    P   +  L Y  +CR RY  +     + F +E+   E++Q  A+D +RVHR
Sbjct: 34  RVGFGQRPPPDEKELTYADICRKRYAASFRRYNECFRREMAKHEEMQRCAIDAMRVHR 91


>UniRef50_A2E2R7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1167

 Score = 33.9 bits (74), Expect = 4.9
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -1

Query: 604 SNLLYCLSNKRKITIFEKKTHMFISVQN*LFHYNL 500
           +N+L+C +N RK+  F+ K   F+ + N  F YNL
Sbjct: 68  NNMLFCFTNSRKLIFFDIKNQKFLKIIN-GFEYNL 101


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,011,010
Number of Sequences: 1657284
Number of extensions: 16798374
Number of successful extensions: 31005
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31002
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)