Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0751
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 147 2e-34
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 139 4e-32
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 139 4e-32
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 133 2e-30
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 95 1e-18
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 92 6e-18
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 91 1e-17
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 80 3e-14
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 79 5e-14
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 74 2e-12
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 62 1e-08
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 60 3e-08
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 55 9e-07
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 51 1e-05
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 50 3e-05
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 48 2e-04
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 46 6e-04
UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5; Euryarc... 44 0.003
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 41 0.021
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 40 0.028
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 38 0.11
UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4; Archaea... 36 0.45
UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3; Desulfu... 36 0.45
UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3; Euryarc... 35 1.0
UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1; ... 34 1.8
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 34 2.4
UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1; Methano... 33 3.2
UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: ... 33 4.2
UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium ja... 33 5.6
UniRef50_Q2IIU4 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1; ... 33 5.6
UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2; Meth... 32 7.3
UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:... 32 7.3
UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2; Cry... 32 7.3
UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2; Thermoprote... 32 7.3
UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5; Methano... 32 7.3
UniRef50_UPI0000DADEF5 Cluster: tetratricopeptide domain protein... 32 9.7
UniRef50_Q0U1N5 Cluster: Putative uncharacterized protein; n=1; ... 32 9.7
UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 32 9.7
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 147 bits (356), Expect = 2e-34
Identities = 84/170 (49%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 163
Score = 119 bits (286), Expect = 5e-26
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 139 bits (336), Expect = 4e-32
Identities = 79/156 (50%), Positives = 99/156 (63%), Gaps = 7/156 (4%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + + + A P R T V
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKYELG----RPAANTKIGPRRIHT---VRVRGGNK 53
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
+R L L +G F+ + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWY
Sbjct: 54 KYRALRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWY 113
Query: 359 ESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKY 466
ESHY LPLGRKKGAKLT EE I+NKKRS+K +KY
Sbjct: 114 ESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKY 149
Score = 119 bits (286), Expect = 5e-26
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR P KKRKYELGRPAANT++GP+RIH+VR RGGN KYRALRLD GNFSWGSEC TRK
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGNKKYRALRLDVGNFSWGSECCTRK 75
Query: 246 TRIL 257
TRI+
Sbjct: 76 TRII 79
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 139 bits (336), Expect = 4e-32
Identities = 80/164 (48%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD+WHKRR TG + + ++ + RP+AN
Sbjct: 1 MGISRDNWHKRRKTGGKRKPYHKKRKY--------ELGRPAANT-------------KIG 39
Query: 200 GHR*LLLGI-GMFNSQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 376
R + + G + +DVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY L
Sbjct: 40 PRRIHTVRVRGGCTRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYAL 99
Query: 377 PLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALE 508
PLGRKKGAKLT EE I+NKKRS+K +KY R++ AK+ LE
Sbjct: 100 PLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLE 143
Score = 67.7 bits (158), Expect = 2e-10
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTK 182
GKR P KKRKYELGRPAANT++GP+RIH+VR RGG T+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHTVRVRGGCTR 54
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 133 bits (322), Expect = 2e-30
Identities = 86/173 (49%), Positives = 103/173 (59%), Gaps = 10/173 (5%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANP-LRSFTWWKY*VPCAA 196
MGISRD HKRRATG + + +R R RP+AN L S K
Sbjct: 1 MGISRDSAHKRRATGGKRKS--------LRKKRKFELGRPAANTKLGSGRVHKVRTRGGN 52
Query: 197 SGHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQW 355
+ R L L G F + DVVYNASNNELVRTKTLVKN+IVV+DATPFRQW
Sbjct: 53 TKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDATPFRQW 112
Query: 356 YESHYTLPLGRKKGAKLTEAEEA--IINKKRSQKTARKYLARQRLAKVEGALE 508
YE+HY LPLGRK+ K + E+ ++ KKRS+K +KYL RQ+ KVE ALE
Sbjct: 113 YEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALE 165
Score = 102 bits (244), Expect = 6e-21
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GKR +RKKRK+ELGRPAANT+LG R+H VR+RGGNTK RALRL+TGNF+W SE RK
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVHKVRTRGGNTKLRALRLETGNFAWASEGVARK 75
Query: 246 TRI 254
TRI
Sbjct: 76 TRI 78
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 94.7 bits (225), Expect = 1e-18
Identities = 42/65 (64%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPI-RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
G R P+ +KKRKYELGRP++NT+LG + + VR RGGN K+RALRLD+GNFSWGS+ TR
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLVRKVRCRGGNLKFRALRLDSGNFSWGSQNVTR 74
Query: 243 KTRIL 257
KTR++
Sbjct: 75 KTRVM 79
Score = 85.8 bits (203), Expect = 6e-16
Identities = 60/132 (45%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD HKRR TG H ++ + RPS+N + V C
Sbjct: 1 MGISRDSRHKRRLTGGRYPVHKKKRKY--------ELGRPSSNTKLGSKLVRK-VRCRGG 51
Query: 200 G--HR*LLLGIGMFN--SQNP-----YLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 352
R L L G F+ SQN +DVVYNAS+NELVRTKTLVKNAIV VD TPF+
Sbjct: 52 NLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDPTPFKL 111
Query: 353 WYESHYTLPLGR 388
W+++HY L LG+
Sbjct: 112 WFKTHYGLELGK 123
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 92.3 bits (219), Expect = 6e-18
Identities = 40/65 (61%), Positives = 52/65 (80%)
Frame = +3
Query: 69 KRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKT 248
KR+ RKKR +E GR ANTR+GP+RIH VR+RGGN K+R LRL++GNFSWGSE RK
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIHLVRTRGGNQKFRGLRLESGNFSWGSEGIARKV 76
Query: 249 RILML 263
R++++
Sbjct: 77 RVIVV 81
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 91.1 bits (216), Expect = 1e-17
Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
GK+ RKKRKYELGR ANT+L + + VR RGGN K+RALRLDTGN+SWGSE TR
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALRLDTGNYSWGSEAVTR 75
Query: 243 KTRIL 257
KTRIL
Sbjct: 76 KTRIL 80
Score = 89.0 bits (211), Expect = 6e-17
Identities = 66/170 (38%), Positives = 88/170 (51%), Gaps = 10/170 (5%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGISRD HKRRATG + A ++ + R + S+N T + V
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKY--ELGRQPANTKLSSNK----TVRRVRVRGGNV 54
Query: 200 GHR*LLLGIGMFN-------SQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWY 358
R L L G ++ + LDVVYNASNNELVRT+TLVK+AIV VDA PF+QWY
Sbjct: 55 KWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWY 114
Query: 359 ESHYTLPLGRKK---GAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 499
+HY + +GRKK AK AE + + ++ R+ + EG
Sbjct: 115 LTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEG 164
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 80.2 bits (189), Expect = 3e-14
Identities = 38/65 (58%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
G P+++++ YELGR ANT+L + + VR RGGNTK+RALR DT N+SWGSE TR
Sbjct: 113 GPFCPLQEEQGYELGRQPANTKLSSNKTVRRVRVRGGNTKWRALRFDTCNYSWGSEALTR 172
Query: 243 KTRIL 257
KTRIL
Sbjct: 173 KTRIL 177
Score = 77.0 bits (181), Expect = 3e-13
Identities = 34/56 (60%), Positives = 45/56 (80%)
Frame = +2
Query: 254 LDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEE 421
LDVVY A+NNELVRT+TLVK+AIV VDA PF+QWY +HY + +GRKK + + ++
Sbjct: 177 LDVVYIATNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGVDIGRKKKVSVAKKDD 232
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 79.4 bits (187), Expect = 5e-14
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GK RK+ K ELGR ANTRLG +R+ VR+RGGN K RALRLDTGNF+W SE +
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRVSPVRARGGNFKIRALRLDTGNFAWASEAIAHR 75
Query: 246 TRIL 257
R+L
Sbjct: 76 VRLL 79
Score = 77.4 bits (182), Expect = 2e-13
Identities = 55/161 (34%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*V-RASRCKHQARPSANPLRSFTWWKY*VPCAA 196
MGI R HKR+ TG +T H + + + R +P+R+ + +
Sbjct: 1 MGIVRSRLHKRKITGGKTKIHRKRMKAELGRLPANTRLGARRVSPVRA-RGGNFKIRALR 59
Query: 197 SGHR*LLLGIGMFNSQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTL 376
+ LDVVYNA++NELVRTKTLVKN IV VDA PF++WY HY +
Sbjct: 60 LDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVAVDAAPFKRWYAKHYGI 119
Query: 377 PL-GRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVE 496
L KK K A E +K + A KY + K++
Sbjct: 120 DLDADKKSTKAAVAAEK-KGRKSAHAAADKYDVNKASPKLQ 159
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
GK+ ++KK+K +GR ANTRLG R+H VR R G K RALRL+ GNFSW S+ T+
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVHDVRCRYGIIKRRALRLENGNFSWASQSITKG 75
Query: 246 TRIL 257
T+IL
Sbjct: 76 TKIL 79
Score = 57.6 bits (133), Expect = 2e-07
Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 13/175 (7%)
Frame = +2
Query: 20 MGISRDHWHKRRATGWETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAAS 199
MGI+RD HKRRATG + + ++++ R AN R + V C
Sbjct: 1 MGITRDSRHKRRATGGKKNSMQKKKK--------NTMGRQPANT-RLGAIRVHDVRCRYG 51
Query: 200 --GHR*LLLGIGMFN--SQN-----PYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 352
R L L G F+ SQ+ L+VVYNAS+N+ VRT TLVK AI+ +D PFR
Sbjct: 52 IIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDPAPFRL 111
Query: 353 WYESHYTLPLGRKKGAKLTEAEEAIINKK----RSQKTARKYLARQRLAKVEGAL 505
W+ Y + K E+ KK + ++ K +A Q++A+ + AL
Sbjct: 112 WFLKFYGKDIASTDYYKSLESATFKTEKKVVVPKEEENKEKTIA-QQIAETQVAL 165
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 61.7 bits (143), Expect = 1e-08
Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 9/80 (11%)
Frame = +3
Query: 87 KKRKYELGRPAANTRL---------GPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECST 239
KKRKY LGR ANT+L Q+I ++R RGGN K RALRL G+F+WGS +
Sbjct: 23 KKRKYNLGRQPANTKLIVKVTSKKNEGQKISTIRCRGGNIKRRALRLSHGSFAWGSADIS 82
Query: 240 RKTRILMLCIMHLTMNWCVQ 299
K RIL + + + T N V+
Sbjct: 83 HKARILQV-VYNSTSNELVR 101
Score = 46.4 bits (105), Expect = 4e-04
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +2
Query: 254 LDVVYNASNNELVRTKTLVKNAIVVVDATPFR 349
L VVYN+++NELVRT TLVK +V +D+ PF+
Sbjct: 88 LQVVYNSTSNELVRTNTLVKGCVVQIDSAPFK 119
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 60.1 bits (139), Expect = 3e-08
Identities = 29/66 (43%), Positives = 38/66 (57%)
Frame = +3
Query: 57 PPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 236
P GK P KR+YELGR TRLG + + +RS GGN+K+ LR D N + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKT 71
Query: 237 TRKTRI 254
TRK +I
Sbjct: 72 TRKVKI 77
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 55.2 bits (127), Expect = 9e-07
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Frame = +3
Query: 66 GKRAPI-RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
G +A I RKKR G ++T++G +++ VR RGGN KY+ALRLD G+F + + R
Sbjct: 15 GAKAVISRKKRNNRAGSQPSSTKIGERKVTPVRVRGGNRKYKALRLDMGHFKFITTGKFR 74
Query: 243 KTRILMLCIMHLTMNWCVQ 299
++L + + H + N V+
Sbjct: 75 MAKLLQV-VYHPSSNELVR 92
Score = 42.3 bits (95), Expect = 0.007
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +2
Query: 254 LDVVYNASNNELVRTKTLVKNAIVVVDATPFR 349
L VVY+ S+NELVRT TL K+++V + A PF+
Sbjct: 79 LQVVYHPSSNELVRTNTLTKSSVVKISAEPFK 110
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 51.2 bits (117), Expect = 1e-05
Identities = 28/64 (43%), Positives = 39/64 (60%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRK 245
G ++ RKKR + GR +NT++G + + +R RGG K RAL L GNFS+ S T K
Sbjct: 16 GLKSCWRKKRNHAKGRQPSNTKIGRRCVVKLRVRGGGVKTRALFLSYGNFSFVSIQRTFK 75
Query: 246 TRIL 257
+IL
Sbjct: 76 AKIL 79
Score = 36.7 bits (81), Expect = 0.34
Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Frame = +2
Query: 20 MGISRDHWHKRRATGW-ETCAHTQEEEV*VRASRCKHQARPSANPLRSFTWWKY*VPCAA 196
MGI+R+ HKR++TG ++C + R +PS + K V
Sbjct: 1 MGINREGLHKRKSTGGLKSCWRKKRNHAKGR--------QPSNTKIGRRCVVKLRVRGGG 52
Query: 197 SGHR*LLLGIGMFNS---QNPY----LDVVYNASNNELVRTKTLVKNAIVVVD 334
R L L G F+ Q + L V +N S+NELVRT TL K +IV +D
Sbjct: 53 VKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLD 105
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 50.0 bits (114), Expect = 3e-05
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +3
Query: 57 PPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECS 236
P G+ + K++ E+GR A T +G +R VR+ GGN K RALRL+ S +
Sbjct: 11 PSGGRYHTSQGKKRTEIGRAPAETHIGEERRRIVRTFGGNQKVRALRLEYATVSNPATGE 70
Query: 237 TRKTRI 254
T+KT+I
Sbjct: 71 TKKTKI 76
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 47.6 bits (108), Expect = 2e-04
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Frame = +2
Query: 311 KNAIVVVDATPFRQWYESHYTLPLGR-----KKGAKLT--EAEEAIINKKRSQKTARKYL 469
K+AIV + PFRQW+E+ Y LG KKG +T EE + KKRS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 470 ARQRL--AKVEGALE 508
RQ L A VE +L+
Sbjct: 61 TRQALPQANVEESLK 75
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 46.0 bits (104), Expect = 6e-04
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
GK+ I KK+ + G NT L I R RGGN K++A+ L G+F W + ++
Sbjct: 9 GKKKKISKKKNHSKGNNPTNTVLRRANFIKMTRVRGGNFKFKAISLGKGSFQWKTMQLSK 68
Query: 243 KTRILMLCIMHLTMNWCVQRPLSR 314
++IL + + +R LS+
Sbjct: 69 NSKILSVLYNQANLKLVQKRNLSK 92
Score = 32.3 bits (70), Expect = 7.3
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 254 LDVVYNASNNELVRTKTLVKNAIVVVDATPF 346
L V+YN +N +LV+ + L K I+ +D+ PF
Sbjct: 73 LSVLYNQANLKLVQKRNLSKGTIIKIDSMPF 103
>UniRef50_Q9HJD0 Cluster: 30S ribosomal protein S8e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Thermoplasma acidophilum
Length = 127
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 84 RKKRKYELGRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIL 257
RKKR++ELGR T+LG + V R+ GGNTK +T N SE +K +I+
Sbjct: 21 RKKRRFELGREPTLTKLGTKTERKVIRTMGGNTKVILFTAETANVYDASEKKIKKAKII 79
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 40.7 bits (91), Expect = 0.021
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 57 PPAGKRAPIRKKRKYELGRPAANTRLGPQR-IHSVRSRGGNTK 182
P G+ P RKKRK+E+G P T +G +R + R GGN K
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEERKLKERRGMGGNVK 54
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 40.3 bits (90), Expect = 0.028
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 57 PPAGKRAPIRKKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGNFSWGSEC 233
P G+ RKKRK ELGR +NTR+ Q + +R+ GGN K R N +
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQDKRKIIRTYGGNRKVRLTAAAYANV-FDKSG 70
Query: 234 STRKTRIL 257
RK RI+
Sbjct: 71 KGRKVRII 78
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 38.3 bits (85), Expect = 0.11
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = +2
Query: 284 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARK 463
ELVRT+TLVKNAI+ Q Y HY L +G KK A T ++ +++ RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKK----ERKGNHVVRK 78
Query: 464 YLARQRLAKVEGALE 508
RQ+ K++ +E
Sbjct: 79 LEKRQQDHKLDPHIE 93
>UniRef50_Q980W3 Cluster: 30S ribosomal protein S8e; n=4;
Archaea|Rep: 30S ribosomal protein S8e - Sulfolobus
solfataricus
Length = 133
Score = 36.3 bits (80), Expect = 0.45
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIH-SVRSRGGNTKYRALRLDTGNFSWGSECSTR 242
G + R KRKYE+G P T L + I R+ GGN K R T N + + +
Sbjct: 15 GLKGKHRDKRKYEIGNPPTFTTLSAEDIRIKDRTLGGNFKVRLKYTTTANVLDPATNTAK 74
Query: 243 KTRIL 257
K +IL
Sbjct: 75 KVKIL 79
>UniRef50_Q9YDY0 Cluster: 30S ribosomal protein S8e; n=3;
Desulfurococcales|Rep: 30S ribosomal protein S8e -
Aeropyrum pernix
Length = 136
Score = 36.3 bits (80), Expect = 0.45
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +3
Query: 57 PPAGKRAPIRK-KRKYELGRPAANTRLGP---QRIHSVRSRGGNTKYRALRLDTGNFSWG 224
P GKR K KRKY GRP T L + VR+RGG+ K +A ++ S
Sbjct: 12 PSGGKRRYYYKVKRKYAAGRPPTYTTLSAAEEEERKPVRARGGSYKIKAKKVAFAVVSNP 71
Query: 225 SECSTRKTRILML 263
RK RIL +
Sbjct: 72 KTGEARKARILRI 84
>UniRef50_Q0W1L5 Cluster: 30S ribosomal protein S8e; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8e -
Uncultured methanogenic archaeon RC-I
Length = 125
Score = 35.1 bits (77), Expect = 1.0
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 84 RKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRI 254
R KRK+ELGR +G Q++ + G +K R L+ D N + T+K ++
Sbjct: 20 RSKRKFELGRDFTIPVIGAQKLKVLNVTGNGSKVRVLKSDVVNVTDPKTGKTQKVKM 76
>UniRef50_A1YJC5 Cluster: Putative uncharacterized protein; n=1;
Spodoptera frugiperda MNPV|Rep: Putative uncharacterized
protein - Spodoptera frugiperda nuclear polyhedrosis
virus (SfNPV)
Length = 106
Score = 34.3 bits (75), Expect = 1.8
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 230 MFNSQNPYLDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKK 394
+FN PY+ VV SNN+ ++ N +V + P++ +Y+ H T+ ++K
Sbjct: 25 IFNKNVPYVYVVKLDSNNDFQDIYKMIDNEVVEIKRPPYK-YYKVHLTINAAKEK 78
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 33.9 bits (74), Expect = 2.4
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 272 ASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRS 445
AS EL KTL K A+ ++D PF W + L R G L A+E +INK+ +
Sbjct: 194 ASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQE-LINKQNT 251
>UniRef50_Q2NEU6 Cluster: 30S ribosomal protein S8e; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 30S ribosomal
protein S8e - Methanosphaera stadtmanae (strain DSM
3091)
Length = 126
Score = 33.5 bits (73), Expect = 3.2
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 42 GISEGPPAGKRAPIRK-KRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRA 191
G S P+G R+ K KR E GR A TR+G + + +RG TK RA
Sbjct: 6 GSSLRKPSGARSRRNKNKRNAEFGRNPAETRIGDEVKKEIVARGNCTKTRA 56
>UniRef50_Q2W531 Cluster: TPR repeat; n=3; Magnetospirillum|Rep: TPR
repeat - Magnetospirillum magneticum (strain AMB-1 /
ATCC 700264)
Length = 556
Score = 33.1 bits (72), Expect = 4.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 69 KRAPIRKKRKYELGRPAANTRLGPQRIHSVRSR 167
+RAP K YE R AA TRL P + ++R R
Sbjct: 272 ERAPANLKANYEKERDAAGTRLSPAELEALRGR 304
>UniRef50_Q89D60 Cluster: Blr7583 protein; n=1; Bradyrhizobium
japonicum|Rep: Blr7583 protein - Bradyrhizobium
japonicum
Length = 261
Score = 32.7 bits (71), Expect = 5.6
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 320 IVVVDATPFRQWYESHYTLPLGRKK 394
++ +D PFR+W + TLPLG K
Sbjct: 22 VIAIDGDPFREWQRTSRTLPLGEVK 46
>UniRef50_Q2IIU4 Cluster: Putative uncharacterized protein; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
uncharacterized protein - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 121
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 24 VLVGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRI-HSVR 161
VL + +S A K A IRK+ +Y GR A TRL P H +R
Sbjct: 63 VLPDVGKLSRSDAAAKAAEIRKRPEYFTGRRADGTRLAPDEYEHLIR 109
>UniRef50_A5E7M6 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 620
Score = 32.7 bits (71), Expect = 5.6
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 335 ATPFRQWYESHYTLPLGRKKGAKLTEAE 418
ATPF Q + +HY L RKKG K+ E E
Sbjct: 374 ATPFYQTFLAHYIWQLKRKKGKKMKEDE 401
>UniRef50_A7D873 Cluster: Exodeoxyribonuclease III Xth; n=2;
Methylobacterium extorquens PA1|Rep:
Exodeoxyribonuclease III Xth - Methylobacterium
extorquens PA1
Length = 344
Score = 32.3 bits (70), Expect = 7.3
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 36 ITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL-DTGN 212
+ G+ G AG+R P+R++ + E RP A+ R P H+ R+R G R L + +
Sbjct: 2 VDGLCRGL-AGRRGPLRRRGRRERLRPLADDR-RPALRHAARARPGGGGGRGLTVCEARR 59
Query: 213 FSWGSECSTRKTRILMLCIMHLTMN 287
F + S S ++ + + + T N
Sbjct: 60 FRYRSGSSRHASQAIPVRLTVTTWN 84
>UniRef50_Q962J8 Cluster: PV1H14180_P; n=2; Plasmodium vivax|Rep:
PV1H14180_P - Plasmodium vivax
Length = 1011
Score = 32.3 bits (70), Expect = 7.3
Identities = 12/36 (33%), Positives = 25/36 (69%)
Frame = +2
Query: 392 KGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEG 499
+G KL EAE+ ++ +++S+ A K L ++ + ++EG
Sbjct: 586 EGGKLMEAEKKLLEEEKSRVDAEKKLMQEEMTRIEG 621
>UniRef50_Q5CW62 Cluster: FH2 domain containing protein; n=2;
Cryptosporidium|Rep: FH2 domain containing protein -
Cryptosporidium parvum Iowa II
Length = 967
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2
Query: 340 SCIYYNNCILDKGLCTHQFIVRCIIHNIKIRVLRVEHSDPQ 218
S I Y N ++G C H F C N I LR+ HSDPQ
Sbjct: 858 SIIKYPNYFNNQGFCEHNFAEICDNSN-SIYDLRIIHSDPQ 897
>UniRef50_A0RXG5 Cluster: Ribosomal protein S8E; n=2;
Thermoprotei|Rep: Ribosomal protein S8E - Cenarchaeum
symbiosum
Length = 129
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +3
Query: 66 GKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFS 218
G+R P+R +RKYE+ R G Q + + RG TK +D N +
Sbjct: 16 GRRHPLRTRRKYEIDRYPNEALSGAQETVTRKVRGKRTKTALKTIDFVNLA 66
>UniRef50_P61300 Cluster: 30S ribosomal protein S8e; n=5;
Methanococcus|Rep: 30S ribosomal protein S8e -
Methanococcus maripaludis
Length = 128
Score = 32.3 bits (70), Expect = 7.3
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +3
Query: 87 KKRKYELGRPAANTRLGPQ-RIHSVRSRGGNTKYRALRLDTGN 212
KK K E+GRPAA T++ + + VR RG N K + + + N
Sbjct: 22 KKHKREMGRPAAETQVSDKIKRKIVRCRGANLKVKLEKTNYAN 64
>UniRef50_UPI0000DADEF5 Cluster: tetratricopeptide domain protein;
n=1; Coxiella burnetii Dugway 7E9-12|Rep:
tetratricopeptide domain protein - Coxiella burnetii
Dugway 7E9-12
Length = 709
Score = 31.9 bits (69), Expect = 9.7
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 341 PFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALESIPH 520
PFRQ ++ +TL KG + EAEE +Q T L +V G L+
Sbjct: 75 PFRQQHDVRFTLIKSYIKGNQYEEAEETFKRIPLNQYTLVTQLLHLEFDRVRGRLDKAEK 134
Query: 521 RAF 529
R F
Sbjct: 135 RLF 137
>UniRef50_Q0U1N5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 228
Score = 31.9 bits (69), Expect = 9.7
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -3
Query: 165 VNERSG--FAEGRAWCLQRDALTHTS-SSCVWAHVSQPVALRLCQ*SR 31
V E +G FAE WCL AL+ TS + +W HV P L CQ S+
Sbjct: 178 VAEEAGPEFAEAVEWCLHTKALSETSWRTDLWKHVIVP--LEACQVSQ 223
>UniRef50_Q8ZTB8 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrobaculum
aerophilum
Length = 131
Score = 31.9 bits (69), Expect = 9.7
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 57 PPAGKRAPIRKKRKYEL-GRPAANTRLGPQRIHSV-RSRGGNTKYRALRLDTGNFSWGSE 230
P GK+ +RK +K L G P +LG V R RGGN K R N E
Sbjct: 15 PSGGKKRKVRKTKKKALGGGPPQIPKLGENDTRIVERVRGGNLKVRLREAKFANVYIPKE 74
Query: 231 CSTRKTRILML 263
+ K +I+ +
Sbjct: 75 RKSVKAKIISI 85
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,155,790
Number of Sequences: 1657284
Number of extensions: 10852972
Number of successful extensions: 32577
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 31528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32555
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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