Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0735
         (644 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)             195   2e-50
SB_10790| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.80 
SB_15451| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.7)            31   1.1  
SB_20220| Best HMM Match : E-MAP-115 (HMM E-Value=2.1)                 29   3.2  

>SB_59557| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1109

 Score =  195 bits (476), Expect = 2e-50
 Identities = 96/151 (63%), Positives = 111/151 (73%)
 Frame = +1

Query: 163  VYLFKYDSTHGRFKGSVEVQDGFLVVNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFT 342
            VY+FKYDSTHGRFKG+VE +DG LV+NG   +VF+ +DP  IP G+ GA+YVVESTGVFT
Sbjct: 817  VYMFKYDSTHGRFKGTVEAKDGKLVINGKPVSVFACKDPTQIPWGETGADYVVESTGVFT 876

Query: 343  TTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRV 522
            T +KA  HL+GGAKKVIISAPSADAPMFV+GVN E YDPS  V+SNASCTTNCLA L +V
Sbjct: 877  TLEKAGFHLKGGAKKVIISAPSADAPMFVMGVNHEKYDPSMTVVSNASCTTNCLAPLVKV 936

Query: 523  FMITLKIVEGLMXXXXXXXXXXXXXDGPSGK 615
                  + EGLM             DGPS K
Sbjct: 937  INDNFGLEEGLMTTIHAYTATQKTVDGPSAK 967


>SB_10790| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 368

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 16/41 (39%), Positives = 25/41 (60%)
 Frame = +2

Query: 5   SVIQQIFYNLPITCQKLESMDLAALAVWCSVLLLKRELKWS 127
           S+ + +FY   I+C+KL S+D+ AL  + S  LL   +K S
Sbjct: 24  SLPKTVFYCKEISCRKLRSIDMTALRDYISSSLLHGTMKTS 64


>SB_15451| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.7)
          Length = 277

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 401 LPVLMPPCLLWVLT*KLMTPLLRSSQMLL 487
           +PV+MP CL  +   K+M PLL  +++LL
Sbjct: 194 IPVIMPHCLAAMSCGKVMAPLLAKAELLL 222


>SB_20220| Best HMM Match : E-MAP-115 (HMM E-Value=2.1)
          Length = 405

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = -1

Query: 398 DIITFLAPPSK*ADALSVVVKTPVDSTTYSAPAFPLGMALGSLSE 264
           D+I  +A P + A A S    T V S +Y+  AFP G    S S+
Sbjct: 175 DVIERMAAPPRDAPATSTPCPTRVLSPSYALAAFPTGENASSSSQ 219


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,099,681
Number of Sequences: 59808
Number of extensions: 451216
Number of successful extensions: 1105
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)