Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0735
(644 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenas... 225 1e-59
At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenas... 223 6e-59
At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenas... 208 2e-54
At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenas... 207 4e-54
At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenas... 136 2e-32
At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenas... 130 6e-31
At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenas... 126 2e-29
At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identi... 29 2.6
At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identi... 29 2.6
At2g44030.1 68415.m05474 kelch repeat-containing F-box family pr... 29 2.6
At4g01330.1 68417.m00173 protein kinase family protein contains ... 29 3.5
At3g03910.1 68416.m00405 glutamate dehydrogenase, putative simil... 29 3.5
At1g21440.1 68414.m02681 mutase family protein similar to carbox... 28 4.6
At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containi... 28 6.1
At4g01740.1 68417.m00226 DC1 domain-containing protein similar t... 28 6.1
At3g63330.1 68416.m07125 protein kinase family protein contains ... 27 8.1
>At1g16300.1 68414.m01951 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 420
Score = 225 bits (551), Expect = 1e-59
Identities = 115/192 (59%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Frame = +1
Query: 46 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 219
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+FKYDSTHG +KG++ V
Sbjct: 85 TKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGNYKGTINVI 144
Query: 220 QDGFLVVNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIIS 399
D L +NG Q V S+RDP IP GAEYVVES+GVFTT +AS+HL+GGAKKVIIS
Sbjct: 145 DDSTLEINGKQVKVVSKRDPAEIPWADLGAEYVVESSGVFTTVGQASSHLKGGAKKVIIS 204
Query: 400 APSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLMXXXXXXX 579
APSADAPMFVVGVN + Y P+ ++SNASCTTNCLA L +V I+EGLM
Sbjct: 205 APSADAPMFVVGVNEKTYLPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATT 264
Query: 580 XXXXXXDGPSGK 615
DGPS K
Sbjct: 265 ATQKTVDGPSMK 276
>At1g79530.1 68414.m09271 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative
similar to glyceraldehyde-3-phosphate dehydrogenase
[Pinus sylvestris] GI:1100223; contains Pfam profiles
PF02800: Glyceraldehyde 3-phosphate dehydrogenase
C-terminal domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 422
Score = 223 bits (546), Expect = 6e-59
Identities = 114/192 (59%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = +1
Query: 46 SKIGINGFGRIGRLVLR-ASIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV- 219
+K+GINGFGRIGRLVLR A+ +VVA+NDPFI YM Y+ KYDSTHG FKGS+ V
Sbjct: 87 TKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGNFKGSINVI 146
Query: 220 QDGFLVVNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVIIS 399
D L +NG + V S+RDP IP GA+YVVES+GVFTT KA++HL+GGAKKVIIS
Sbjct: 147 DDSTLEINGKKVNVVSKRDPSEIPWADLGADYVVESSGVFTTLSKAASHLKGGAKKVIIS 206
Query: 400 APSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLMXXXXXXX 579
APSADAPMFVVGVN Y P+ ++SNASCTTNCLA L +V I+EGLM
Sbjct: 207 APSADAPMFVVGVNEHTYQPNMDIVSNASCTTNCLAPLAKVVHEEFGILEGLMTTVHATT 266
Query: 580 XXXXXXDGPSGK 615
DGPS K
Sbjct: 267 ATQKTVDGPSMK 278
>At1g13440.1 68414.m01570 glyceraldehyde 3-phosphate dehydrogenase,
cytosolic, putative / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase, putative very
strong similarity to SP|P25858 Glyceraldehyde
3-phosphate dehydrogenase, cytosolic (EC 1.2.1.12)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 338
Score = 208 bits (508), Expect = 2e-54
Identities = 108/198 (54%), Positives = 137/198 (69%), Gaps = 3/198 (1%)
Frame = +1
Query: 31 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFKG 207
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 208 -SVEVQDGFLVVNG*QNA-VFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGA 381
++V+D ++ G + VF R+P+ IP G+AGA++VVESTGVFT DKA+AHL+GGA
Sbjct: 61 HELKVKDDKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGA 120
Query: 382 KKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLMX 561
KKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLA L +V IVEGLM
Sbjct: 121 KKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 180
Query: 562 XXXXXXXXXXXXDGPSGK 615
DGPS K
Sbjct: 181 TVHSITATQKTVDGPSMK 198
>At3g04120.1 68416.m00436 glyceraldehyde-3-phosphate dehydrogenase,
cytosolic (GAPC) / NAD-dependent
glyceraldehyde-3-phosphate dehydrogenase identical to
SP|P25858 Glyceraldehyde 3-phosphate dehydrogenase,
cytosolic (EC 1.2.1.12) {Arabidopsis thaliana}
Length = 338
Score = 207 bits (506), Expect = 4e-54
Identities = 107/198 (54%), Positives = 136/198 (68%), Gaps = 3/198 (1%)
Frame = +1
Query: 31 LADNMSKIGINGFGRIGRLVLRASIEKG-AQVVAINDPFIGLDYMVYLFKYDSTHGRFK- 204
+AD +IGINGFGRIGRLV R +++ ++VA+NDPFI +YM Y+FKYDS HG++K
Sbjct: 1 MADKKIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKH 60
Query: 205 GSVEVQDGFLVVNG*QNA-VFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGA 381
++++D ++ G + VF R+P+ IP +AGA+YVVESTGVFT DKA+AHL+GGA
Sbjct: 61 NELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGA 120
Query: 382 KKVIISAPSADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLMX 561
KKV+ISAPS DAPMFVVGVN Y ++SNASCTTNCLA L +V IVEGLM
Sbjct: 121 KKVVISAPSKDAPMFVVGVNEHEYKSDLDIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 180
Query: 562 XXXXXXXXXXXXDGPSGK 615
DGPS K
Sbjct: 181 TVHSITATQKTVDGPSMK 198
>At1g12900.1 68414.m01498 glyceraldehyde 3-phosphate dehydrogenase,
chloroplast, putative / NADP-dependent
glyceraldehydephosphate dehydrogenase, putative similar
to SP|P25856 Glyceraldehyde 3-phosphate dehydrogenase A,
chloroplast precursor (EC 1.2.1.13) (NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A)
{Arabidopsis thaliana}; contains Pfam profiles PF02800:
Glyceraldehyde 3-phosphate dehydrogenase C-terminal
domain, PF00044: Glyceraldehyde 3-phosphate
dehydrogenase NAD binding domain
Length = 399
Score = 136 bits (328), Expect = 2e-32
Identities = 80/175 (45%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Frame = +1
Query: 49 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 219
K+ INGFGRIGR LR + VV IND G+ +L KYDST G F V+
Sbjct: 66 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVINDTG-GVKQASHLLKYDSTLGIFDADVKP 124
Query: 220 Q-DGFLVVNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 396
D L V+G + S+R+P +P G+ G + V+E TGVF D A HL+ GAKKV+I
Sbjct: 125 SGDSALSVDGKIIKIVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHLQAGAKKVLI 184
Query: 397 SAP-SADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLM 558
+AP D P +VVGVN E Y +ISNASCTTNCLA +V I++G M
Sbjct: 185 TAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCLAPFVKVLDQKFGIIKGTM 239
>At3g26650.1 68416.m03330 glyceraldehyde 3-phosphate dehydrogenase
A, chloroplast (GAPA) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit A
identical to SP|P25856 Glyceraldehyde 3-phosphate
dehydrogenase A, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit A) {Arabidopsis thaliana}
Length = 396
Score = 130 bits (315), Expect = 6e-31
Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 5/175 (2%)
Frame = +1
Query: 49 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 219
K+ INGFGRIGR LR + ++AIND G+ +L KYDST G F V+
Sbjct: 63 KVAINGFGRIGRNFLRCWHGRKDSPLDIIAINDTG-GVKQASHLLKYDSTLGIFDADVKP 121
Query: 220 Q-DGFLVVNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 396
+ + V+G V S R+P +P + G + V+E TGVF + A H+E GAKKVII
Sbjct: 122 SGETAISVDGKIIQVVSNRNPSLLPWKELGIDIVIEGTGVFVDREGAGKHIEAGAKKVII 181
Query: 397 SAPS-ADAPMFVVGVNLEAYDPSFKVISNASCTTNCLAHLQRVFMITLKIVEGLM 558
+AP D P +VVGVN +AY +ISNASCTTNCLA +V I++G M
Sbjct: 182 TAPGKGDIPTYVVGVNADAYSHDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTM 236
>At1g42970.1 68414.m04947 glyceraldehyde-3-phosphate dehydrogenase
B, chloroplast (GAPB) / NADP-dependent
glyceraldehydephosphate dehydrogenase subunit B
identical to SP|P25857 Glyceraldehyde 3-phosphate
dehydrogenase B, chloroplast precursor (EC 1.2.1.13)
(NADP-dependent glyceraldehydephosphate dehydrogenase
subunit B) {Arabidopsis thaliana}
Length = 447
Score = 126 bits (303), Expect = 2e-29
Identities = 77/177 (43%), Positives = 101/177 (57%), Gaps = 7/177 (3%)
Frame = +1
Query: 49 KIGINGFGRIGRLVLRA---SIEKGAQVVAINDPFIGLDYMVYLFKYDSTHGRFKGSVEV 219
K+ INGFGRIGR LR + +VV +ND G+ +L KYDS G FK V++
Sbjct: 83 KVAINGFGRIGRNFLRCWHGRKDSPLEVVVLNDSG-GVKNASHLLKYDSMLGTFKAEVKI 141
Query: 220 QDGFLV-VNG*QNAVFSERDPKAIPRGKAGAEYVVESTGVFTTTDKASAHLEGGAKKVII 396
D + V+G V S RDP +P + G + V+E TGVF A H++ GA KVII
Sbjct: 142 VDNETISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGASKVII 201
Query: 397 SAPS--ADAPMFVVGVNLEAYDPSF-KVISNASCTTNCLAHLQRVFMITLKIVEGLM 558
+AP+ AD P +V+GVN + Y +ISNASCTTNCLA +V IV+G M
Sbjct: 202 TAPAKGADIPTYVMGVNEQDYGHDVANIISNASCTTNCLAPFAKVLDEEFGIVKGTM 258
>At5g18170.1 68418.m02133 glutamate dehydrogenase 1 (GDH1) identical
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 58 INGFGRIGRLVLRASIEKGAQVVAIND 138
I GFG +G + EKG ++VA++D
Sbjct: 211 IQGFGNVGSWAAKLISEKGGKIVAVSD 237
>At5g07440.1 68418.m00851 glutamate dehydrogenase 2 (GDH2) identical
to glutamate dehydrogenase 2 (GDH 2) [Arabidopsis
thaliana] SWISS-PROT:Q38946
Length = 411
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 58 INGFGRIGRLVLRASIEKGAQVVAIND 138
I GFG +G + EKG +VVA++D
Sbjct: 211 IQGFGNVGTWAAKLIHEKGGKVVAVSD 237
>At2g44030.1 68415.m05474 kelch repeat-containing F-box family
protein low similarity to SKP1 interacting partner 6
[Arabidopsis thaliana] GI:10716957; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 380
Score = 29.1 bits (62), Expect = 2.6
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +2
Query: 83 VWCSVLLLKRELKWSL*MTLSSVLTI 160
+WC+++LL+REL W + +V T+
Sbjct: 331 IWCALILLERELVWGVIEWSENVFTL 356
>At4g01330.1 68417.m00173 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 329
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = -3
Query: 159 IVKTDERVIYSDHLSSLFNRSTEHQTANAAKS 64
I KT+ RV++SD +SS +R T +TA+ + S
Sbjct: 103 IGKTEHRVVFSDRVSSGESRGTVSETASYSGS 134
>At3g03910.1 68416.m00405 glutamate dehydrogenase, putative similar
to glutamate dehydrogenase 1 (GDH 1) [Arabidopsis
thaliana] SWISS-PROT:Q43314
Length = 411
Score = 28.7 bits (61), Expect = 3.5
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 49 KIGINGFGRIGRLVLRASIEKGAQVVAIND 138
+ I GFG +G + +KG ++VA++D
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSD 237
>At1g21440.1 68414.m02681 mutase family protein similar to
carboxyvinyl-carboxyphosphonate phosphorylmutase
GB:O49290 from [Arabidopsis thaliana]; similar to
carboxyphosphonoenolpyruvate mutase (GI:47149)
[Streptomyces hygroscopicus]; contains Prosite PS00161:
Isocitrate lyase signature
Length = 336
Score = 28.3 bits (60), Expect = 4.6
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 298 KAGAEYVVESTGVFTTTDKASAHLEGGAKKVIISAPSADAPMFVVGVNLEAY 453
+ A + TG+ D+A+ ++E GA + AP D + +G + Y
Sbjct: 191 RTDARALSAKTGLSDAIDRANLYMEAGADASFVEAPRDDDELKEIGRRTKGY 242
>At5g46100.1 68418.m05668 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 472
Score = 27.9 bits (59), Expect = 6.1
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 557 IKPSTI-FKVIMNTLCKWARQFVVQEAFEMTLKEGS*ASRLTPTT 426
I+P+ + +M+ LCK R E FEM + G + +T TT
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
>At4g01740.1 68417.m00226 DC1 domain-containing protein similar to
T15B16.6 similar to A. thaliana CHP-rich hypothetical
proteins encoded by T10M13, GenBank accession number
AF001308
Length = 652
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3
Query: 603 SINSFLCSSCGMNSSHQAF 547
S+ SFLCS+CG+N +
Sbjct: 224 SLRSFLCSACGLNGDRSPY 242
>At3g63330.1 68416.m07125 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 376
Score = 27.5 bits (58), Expect = 8.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 332 VSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLL 430
V+ L +H+ W E K+L Y+L LM C+L
Sbjct: 262 VTRALLDQHIRGWSENFKELAYKLRSLMEMCIL 294
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,994,239
Number of Sequences: 28952
Number of extensions: 321662
Number of successful extensions: 821
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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