Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0727
         (788 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.2  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    24   1.2  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   3.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   8.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.5  

>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 20/62 (32%), Positives = 25/62 (40%)
 Frame = +3

Query: 429 PIALEKGLGFTDAPVSGGVMGAQNATLPSWPEVVKKTSKGPFLSSK*WELSSSTADRSAQ 608
           PI + K    T  P  GGV  A+     S  E  KKT   P L    W   +  +DR + 
Sbjct: 147 PINIRKCKPKTVVPEVGGVEEAKGPVDLSKSEPEKKTESQPMLWPA-WVYCTRYSDRPSS 205

Query: 609 DR 614
            R
Sbjct: 206 GR 207


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 15/54 (27%), Positives = 23/54 (42%)
 Frame = -3

Query: 417 WEHSDLLYSNRSEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWS 256
           W   D+     S A +F  +         + AR+   ++WK+ R  H RL Q S
Sbjct: 102 WTFIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLS 155


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = -1

Query: 206 GS*PRTVKPFLTKFAAMNPPMFPRPRKATFLSV 108
           G  P T   FL   A M PP  P P   TF S+
Sbjct: 158 GRAPLTYHQFLAIIACMGPPPQPEP-PVTFNSL 189


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 766 QSPRSTRSEPMSCSARPTE 710
           Q  ++T SEP   S +PTE
Sbjct: 402 QPTQTTESEPTQASEQPTE 420


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 772 TGQSPRSTRSEPMSCSARP 716
           T  SPRS   +P++C   P
Sbjct: 62  TPSSPRSISEDPLNCRDLP 80


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 152 PPMFPRPRKATFLSVLELYARLAAVYK 72
           PP  P PR  +F   +   +++  +YK
Sbjct: 731 PPPPPPPRVESFAETVRTVSKIPPLYK 757


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/37 (32%), Positives = 13/37 (35%)
 Frame = -2

Query: 730 CSARPTELRFESHFNAHVHALSCSHSGDAHQHVIGQF 620
           C   P  + F  HFN H       HS    Q   G F
Sbjct: 155 CPIHPG-MTFRYHFNVHNSGTHFWHSHSGFQRSDGTF 190


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 469 GASVNPSPFSRAIGKICLGTFGSIVLESIRSDPFF 365
           G S+N    S  +    LG FG  VL  +    FF
Sbjct: 114 GYSINYRRISIFVNLAILGVFGEFVLVFVPDYVFF 148


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,360
Number of Sequences: 336
Number of extensions: 4786
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)