Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0718
(506 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 66 2e-11
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 54 9e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 50 1e-06
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 47 1e-05
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 46 1e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 2e-05
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 9e-04
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.006
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 37 0.008
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 36 0.025
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.034
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.077
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.077
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 33 0.10
SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 33 0.10
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.10
SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 32 0.31
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 31 0.55
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 31 0.55
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 31 0.55
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.95
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 30 1.3
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 30 1.3
SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 29 2.2
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 2.2
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 2.2
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 2.9
SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 28 3.8
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 28 3.8
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 3.8
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 3.8
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.8
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 5.1
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 5.1
SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 27 6.7
SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07) 27 6.7
SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.7
SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2) 27 6.7
SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 8.9
SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056) 27 8.9
SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 27 8.9
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 27 8.9
SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_23204| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 66.1 bits (154), Expect = 2e-11
Identities = 31/76 (40%), Positives = 50/76 (65%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSE 450
V DP T RSRGF F+ FK P+++D V+ +G +++D KK KIF+GGLS+
Sbjct: 139 VMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKKMVTTTKKIFIGGLSTN 193
Query: 451 ISDDEIRNFFSEFGTI 498
S+++++ +FS+FG +
Sbjct: 194 TSEEDMKKYFSQFGKV 209
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+K+F+GGLS T+ ++++ +F +G+
Sbjct: 183 KKIFIGGLSTNTSEEDMKKYFSQFGK 208
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 53.6 bits (123), Expect = 9e-08
Identities = 23/75 (30%), Positives = 50/75 (66%), Gaps = 11/75 (14%)
Frame = +1
Query: 292 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----------AKARHGKIFVGG 438
GRSRGF F+ +++ +S+++V+ +H +++++++PK+ A ++ KIFVGG
Sbjct: 86 GRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDESGAPEAMSKTRKIFVGG 145
Query: 439 LSSEISDDEIRNFFS 483
L+S +++I+ +F+
Sbjct: 146 LASTTVEEDIKEYFN 160
Score = 38.3 bits (85), Expect = 0.004
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +1
Query: 265 INVKTD-PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 408
+++K D N R RGFAF+ F E ++KV A H I K+ + KKA+
Sbjct: 174 VDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 37.9 bits (84), Expect = 0.005
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYG 253
RK+F+GGL+W TT + L+D+F +G
Sbjct: 50 RKIFIGGLNWNTTEEGLKDYFSQWG 74
Score = 33.5 bits (73), Expect = 0.10
Identities = 11/28 (39%), Positives = 24/28 (85%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
KIF+GGL+ +++ ++++FS++GTI++
Sbjct: 51 KIFIGGLNWNTTEEGLKDYFSQWGTIVD 78
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGA 247
RK+FVGGL+ T ++++++F +
Sbjct: 139 RKIFVGGLASTTVEEDIKEYFNS 161
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD-----PKKAKARHG 420
I+ VK DPNT RSRGF F+ FK E V++ H I + + PK+
Sbjct: 141 IDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST-SHRIQGRLCEVRLPRPKEELNVPK 199
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG L ++ + +F++FG + +
Sbjct: 200 KLFVGRLPESTTEKTLMEYFAQFGEVTD 227
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KLFVG L TT K L ++F +GE
Sbjct: 199 KKLFVGRLPESTTEKTLMEYFAQFGE 224
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/74 (39%), Positives = 38/74 (51%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLS 444
+++K D TGR RGFAF+ FK D + I K R KIFVGGL
Sbjct: 58 VDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAAPIG------KPPHLRVKKIFVGGLK 111
Query: 445 SEISDDEIRNFFSE 486
E SD++IR +F +
Sbjct: 112 PETSDEKIREYFGK 125
Score = 47.6 bits (108), Expect = 6e-06
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2
Query: 128 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
G S D N DD KLFVGGLS+ETT + L+++F YGE
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGE 54
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 405
++ I T+ ++ R RGF F+ F + +++DK+ H I KV+ K+A
Sbjct: 130 VKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 179
Score = 34.7 bits (76), Expect = 0.044
Identities = 12/28 (42%), Positives = 22/28 (78%)
Frame = +1
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTIL 501
GK+FVGGLS E + + ++ +FS++G ++
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSKYGELV 56
Score = 30.7 bits (66), Expect = 0.72
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFG 244
+K+FVGGL ET+ +++R++FG
Sbjct: 103 KKIFVGGLKPETSDEKIREYFG 124
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 47.2 bits (107), Expect = 8e-06
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 21/87 (24%)
Frame = +1
Query: 301 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 417
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 418 GKIFVGGLSSEISDDEIRNFFSEFGTI 498
GK+F+GGL+ ++++++ +FS +G +
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFSTYGMV 228
Score = 36.3 bits (80), Expect = 0.015
Identities = 13/30 (43%), Positives = 23/30 (76%)
Frame = +2
Query: 164 GRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
G +D K+F+GGL++ TT ++L+++F YG
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLKEYFSTYG 226
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/69 (36%), Positives = 37/69 (53%)
Frame = +1
Query: 292 GRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIR 471
G SR + F++FK + K + H IN K VD K++ I+VGGL S ++ +R
Sbjct: 117 GYSRNYGFVLFK-DDGPSKEVLKKSHVINGKTVDVGKSR-NFRVIYVGGLPSHFTEQTVR 174
Query: 472 NFFSEFGTI 498
F +FG I
Sbjct: 175 EHFKKFGVI 183
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +1
Query: 376 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
N+ PK + +FVGGL+S ++ ++++F +FG +
Sbjct: 66 NSTLPSPKDIEKNSRSVFVGGLASGTDEEGLKDYFEQFGEV 106
Score = 32.3 bits (70), Expect = 0.24
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 390
+ +++ TD TG+S+G + + P +++K++ H I +V
Sbjct: 345 VAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQV 389
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYGE 256
+ R +FVGGL+ T + L+D+F +GE
Sbjct: 78 NSRSVFVGGLASGTDEEGLKDYFEQFGE 105
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 179 RKLFVGGLSWETTXKELRDHFGAYGE 256
+KL V L ++TT ELR++F GE
Sbjct: 236 KKLMVQDLDFDTTVDELREYFEKCGE 261
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 46.4 bits (105), Expect = 1e-05
Identities = 21/70 (30%), Positives = 40/70 (57%)
Frame = +1
Query: 289 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 468
+G+S+GFAF+ + E+++ V+ +H I+N V +K + + K+ + + S I + +I
Sbjct: 79 SGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSMEK-QDTYRKVILKNIPSSIGESQI 137
Query: 469 RNFFSEFGTI 498
FS G I
Sbjct: 138 LEHFSSSGEI 147
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +1
Query: 280 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +2
Query: 146 NSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
N E D KLFVGGL+ ETT + LR++F AYGE
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFEAYGE 39
Score = 34.3 bits (75), Expect = 0.059
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVF---KAPESI--DKVMAAGEHTINNKKVDPKKAKARHG 420
+ + V D T +SRGF ++ F K ++ DKV G H I+ K+V+ K+A R
Sbjct: 40 LTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV-ENGAHRIDGKEVEVKRAIPRDD 98
Query: 421 ----------KIFVGGLSSEISDDEIR 471
KIFVGGL + + ++I+
Sbjct: 99 NSATSHEKTKKIFVGGLPEDATKEDIQ 125
Score = 30.7 bits (66), Expect = 0.72
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVGGL+ E +++ +R +F +G + +
Sbjct: 15 KLFVGGLNRETTNETLREYFEAYGELTD 42
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 295 RSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 414
+ RGFAF+ + D++ + + K V+ KKA R
Sbjct: 150 KHRGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPR 189
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 238 FWSIR*IESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PK 399
F ++ + S + D TG+S G+AF+ + P+ +K V + NK KV P
Sbjct: 47 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPS 106
Query: 400 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
+ ++ +++ GL ++ ++E+ F FG I+
Sbjct: 107 STEIKNANLYISGLPKDMKEEEVEALFKPFGKII 140
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 40.3 bits (90), Expect = 9e-04
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGE-HTINNKKVDPKKAKARHG--- 420
+ S+++ P G+SR F F+ F + ID ++ E H+I+NK+V+ K+A R
Sbjct: 39 VSSVSLAKTPE-GKSRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPRDDPNE 97
Query: 421 -------KIFVGGLSSEISDDEIR 471
K+F+GGL E S+++++
Sbjct: 98 LAHVRTKKLFIGGLKDEHSEEDVK 121
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = +2
Query: 170 DDDR--KLFVGGLSWETTXKELRDHFGAYGE 256
DD + KLFVGGL+ +TT + +R +F ++ E
Sbjct: 3 DDSKLMKLFVGGLNEDTTEETVRAYFKSFCE 33
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEF 489
K+FVGGL+ + +++ +R +F F
Sbjct: 9 KLFVGGLNEDTTEETVRAYFKSF 31
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 405
I + D T + +G+ F+ F +DK+ + K V+ KKA
Sbjct: 135 IKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK----AKAR-HG 420
I ++ DP TG ++GFAF F S + + T+N+K + P + K+R +
Sbjct: 179 IREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT----TLNDKDIRPGRRLAICKSRSNS 234
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
++FV G+ S +EI FS+ T L+
Sbjct: 235 RLFVKGIPKRKSKEEIFQEFSKVTTDLQ 262
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.006
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 259 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVGG+ E DD +R FF++FG I E
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIRE 38
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYGE*R 262
KLFVGG+ +E+ LR F +GE R
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQFGEIR 37
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 36.7 bits (81), Expect = 0.011
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 22/102 (21%)
Frame = +1
Query: 265 INVKTDPNTGRSRGFAFIVF-------KAPESIDKVMAAGEHTINN---KKVDPKKAKAR 414
+ V DP +S+GF F+ F KA +D V G+ N +K +P + K
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARKNNPTQTKPL 601
Query: 415 ------------HGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+ ++VG L ++ D E++ FS++G+ILE
Sbjct: 602 VWDDVFHQSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILE 643
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 35.5 bits (78), Expect = 0.025
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 423
I S+ V TDP G+S+GF F+ F+ PE ++ + + +N K++ ++ A K
Sbjct: 135 IVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV----NVLNGKEIGGRRLWAGRAK 185
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
I S V D + G S+GF F+ F +PE K +
Sbjct: 238 ISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 35.5 bits (78), Expect = 0.025
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI 342
+E++ + TD NTG+ R F F+ F +P S+
Sbjct: 483 LENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.034
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 262 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKV---MAAGEHTINNKKVDPKKAKARHGKI 426
+ + V +D T R RGFAF+ F + ++++ + E + KV+ +++ + G
Sbjct: 255 VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQRGGG 314
Query: 427 FVGGLSS 447
GG S
Sbjct: 315 RGGGYRS 321
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 33.9 bits (74), Expect = 0.077
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESID-KVMAAGEHTINNKKVDPKKAKARH----- 417
+ ++++ D T +G+ F+ F E D + + K + KA A +
Sbjct: 39 VVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVMNMIKVYGKPIRVNKASAHNKNLDV 98
Query: 418 -GKIFVGGLSSEISDDEIRNFFSEFGTILE 504
+F+G L +E+ + + + FS FG IL+
Sbjct: 99 GANLFIGNLDTEVDEKLLYDTFSAFGVILQ 128
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 378
+++ + D +TG S+GFAFI F + ++ D + A G++ N
Sbjct: 127 LQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCN 169
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 33.9 bits (74), Expect = 0.077
Identities = 22/70 (31%), Positives = 35/70 (50%)
Frame = -1
Query: 365 SPAAMTLSIDSGALNTMKANPRDLPVFGSVFTLILSIHRMLQNDHGAPYXWSPSSAHQQK 186
SP A++ +D G +A +++P F TL L +H G P ++PSS H++
Sbjct: 371 SPDALSKGLDMGWGALSRAGVQEMPAFP---TLRLPLHPFASTGFGTPAFYNPSSYHRE- 426
Query: 185 VFCRHRVLGP 156
+ VLGP
Sbjct: 427 ---YYPVLGP 433
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 33.5 bits (73), Expect = 0.10
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
+ + V TD TGR RGF F+ F + E ++K +
Sbjct: 30 VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
>SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33)
Length = 662
Score = 33.5 bits (73), Expect = 0.10
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
++F+G L S + D ++ FS++GTILE
Sbjct: 358 QVFIGNLPSGVKDADVNEVFSKYGTILE 385
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 33.5 bits (73), Expect = 0.10
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 185 LFVGGLSWETTXKELRDHFGAYGE*R 262
L+VGGL + T ++LRDHF +GE R
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGELR 331
Score = 28.3 bits (60), Expect = 3.8
Identities = 8/25 (32%), Positives = 19/25 (76%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTI 498
++VGGL ++++ ++R+ F +FG +
Sbjct: 306 LYVGGLEGKVTEQDLRDHFYQFGEL 330
>SB_34062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 552
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 331 PESI-DKVMAAGEHTIN-NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
PE++ D+++ + ++N + D + K+FVGGL +I +DEI F FG++
Sbjct: 313 PENLADQIVPSLASSLNCSPNSDSEHIPRFSRKVFVGGLPPDIDEDEIHASFCRFGSL 370
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 31.9 bits (69), Expect = 0.31
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
+IFV G + E ++ E+R FF E+G + E
Sbjct: 9 RIFVKGFNRETTESELRAFFEEYGVVKE 36
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 167 RDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+D +++FV G + ETT ELR F YG
Sbjct: 4 QDISKRIFVKGFNRETTESELRAFFEEYG 32
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 31.1 bits (67), Expect = 0.55
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTILE 504
K+FVG +S ++++R FS FGTI E
Sbjct: 215 KLFVGMISKHAKEEDLRVMFSPFGTIEE 242
Score = 28.7 bits (61), Expect = 2.9
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +2
Query: 173 DDRKLFVGGLSWETTXKELRDHFGAYG 253
DDRKLFVG +S ++LR F +G
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVMFSPFG 238
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 31.1 bits (67), Expect = 0.55
Identities = 21/82 (25%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK-----AKARHG 420
I + DP +G ++GFAF F + + ++NK++ P K +
Sbjct: 178 IYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGKRLGVCISVANS 233
Query: 421 KIFVGGLSSEISDDEIRNFFSE 486
++FVG + S EI FS+
Sbjct: 234 RLFVGSIPKTKSKQEILEEFSK 255
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +1
Query: 289 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV--DPK 399
TG+S+GF ++ ++ ES + + AG H I+ K V +PK
Sbjct: 99 TGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWVIAEPK 136
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 31.1 bits (67), Expect = 0.55
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESI 342
+E +++ D +GRSRGF F++ ++ + I
Sbjct: 34 VEKVDILRDKESGRSRGFGFVLLQSADQI 62
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 31.1 bits (67), Expect = 0.55
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 421 KIFVGGLSSEISDDEIRNFFSEFGTI 498
KIF+GGL + +++D+++ S FG +
Sbjct: 674 KIFIGGLPNYLNEDQVKELLSSFGEL 699
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 31.1 bits (67), Expect = 0.55
Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +1
Query: 382 KKVDPK--KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTI 498
KK+ PK + + G I++G + ++EI+ FF +FGT+
Sbjct: 84 KKIKPKGDEDELSPGVIYLGHIPHGFFENEIKKFFEQFGTV 124
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 0.72
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +2
Query: 62 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 178
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 30.3 bits (65), Expect = 0.95
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +1
Query: 271 VKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSE 450
V +P G SRGFAF+ + E +K G+ N ++V+ + +G G +
Sbjct: 237 VAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNIRVAYGS--PGRTGAS 290
Query: 451 ISDDEIRNFFSEFGTI 498
I ++ N + + T+
Sbjct: 291 ILGSQLDNTQAGYTTV 306
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 0.95
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 211
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NNDN + + +N N N N ++ D+NS + D
Sbjct: 593 NNDNNNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSD 632
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDR 181
NN+N + DN + N++N ++ D+NS + +R
Sbjct: 609 NNNNNNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSER 649
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 122 GGGDSQDHNSAEA-PGRDDDRKLFVGGLSWETTXKELRDHFGAYGE 256
GGG +++ E PG R LFVG + TT +L++ F YGE
Sbjct: 231 GGGSISNYSEDEFDPGCT--RTLFVGNIEKTTTYGDLKEAFERYGE 274
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N + +N N N N ++ ++N+ + DDD
Sbjct: 14 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDD 53
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N + +N N N N D+ D + + DDD
Sbjct: 22 NNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDDDDDD 61
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 354
++++++ TD SRGFA++ + PE +K +
Sbjct: 1183 VKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
>SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 138
Score = 29.5 bits (63), Expect = 1.7
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +1
Query: 379 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTIL 501
+K + K + K+FVG + ++ E+++FF FG ++
Sbjct: 66 SKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDVV 106
Score = 29.5 bits (63), Expect = 1.7
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 182 KLFVGGLSWETTXKELRDHFGAYGE 256
K+FVG + ++ +EL+D FG +G+
Sbjct: 80 KVFVGNIGFKVRARELKDFFGYFGD 104
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 151
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/40 (32%), Positives = 16/40 (40%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN N TT+N N N N D D + +DD
Sbjct: 173 NNINTTTTTTTNNNNNNNNNNNDDDDDDDTDDDDHNNNDD 212
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/69 (17%), Positives = 32/69 (46%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVG 435
+ES+ + D TG +GF +++F++ +++ + +K+ +K + F+
Sbjct: 82 VESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKPQTEFIS 141
Query: 436 GLSSEISDD 462
+ D+
Sbjct: 142 HIQVRFRDN 150
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 62 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 151
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 393
I+ + K+ N G++ G AF+VFK+ K + I ++ ++
Sbjct: 361 IDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +2
Query: 56 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.7 bits (61), Expect = 2.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 256 IESINVKTDPNTGRSRGFAFIVFKAPES 339
+ + V TD TGR RGF F+ +A ++
Sbjct: 107 VVDVRVITDRETGRPRGFGFVTLEAKKT 134
>SB_9399| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 28.7 bits (61), Expect = 2.9
Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -1
Query: 287 FGSVFTLILSIHRMLQNDH--GAPYXWSPSSAHQQKVFCRHRVLGPQHCYDLAN 132
+G V +L + R LQ H P W P QQK++ + D +N
Sbjct: 109 YGGVLSLTDDVMRQLQEKHPNAQPLSWDPCCLAQQKMYTSQSITDAVMLVDASN 162
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 131 DSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRDHFGAYG 253
+++D + E G+ LFVG L ++ T +++ DHF G
Sbjct: 58 ETEDVITKEQDGKKQRYILFVGNLPFDLTTEKVLDHFRCAG 98
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 3.8
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +1
Query: 424 IFVGGLSSEISDDEIRNFFSEFGTIL 501
+FVG + E S+++++ FSE G ++
Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVI 52
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 65 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 178
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 3.8
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +2
Query: 62 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 151
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 28.3 bits (60), Expect = 3.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 391 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 504
DPK + +FVG L + IS ++R F +FG +L+
Sbjct: 232 DPKATRT----LFVGNLETGISCQDLRLSFEKFGVVLD 265
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 3.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 181 SVVIASWGLSTVMILRITATVLCISIKLV 95
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 3.8
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQD 142
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 28.3 bits (60), Expect = 3.8
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWE 211
+ND D D+++NG + N GGD D + + DDD + G S++
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYD 112
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
+N+N +DI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 148
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 56 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 184
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 56 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 184
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 330
>SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13)
Length = 337
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 176 DRKLFVGGLSWETTXKELRDHFGAYGE 256
DR +FVG L K L+ +F YGE
Sbjct: 20 DRTVFVGNLPLTLKKKALKKYFSKYGE 46
>SB_56231| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 383
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKLFVGG 199
++D D D+ + G+ ++ GD D + + G DDD + GG
Sbjct: 248 DDDGEVDDAGGDDGVGGDNDDDRGDDGDDDEDDDRGNDDDEDDWGGG 294
>SB_39141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N + +N N N N D D + + DDD
Sbjct: 87 NNNNNNNNNNNNNNNNNNNNNNNNDDDDDDDDDDDDNDDD 126
>SB_23339| Best HMM Match : I-set (HMM E-Value=1.3e-07)
Length = 423
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN N ++ DN + +A+N D D+N+ + G DD
Sbjct: 14 NNGNDDENNYNDNHNDKDADNKNNDDGDNNNNDKCGYKDD 53
>SB_20262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 148
NNDN+ + DN N + NG DS D+N
Sbjct: 192 NNDNYDNNDNNDNNDNNDNYDNNGNNDSNDNN 223
>SB_19847| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 151
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 92 DNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
DN + + ++GGGD D N + G DDD
Sbjct: 92 DNDDSNDVDDGGGDGDDDNDGD--GVDDD 118
>SB_15580| Best HMM Match : Pentapeptide (HMM E-Value=0.2)
Length = 610
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 56 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEA 160
ANN N A + N N NA N ++ + N+A A
Sbjct: 254 ANNANNANNANNANANNANANNANANNANANNANA 288
>SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 734
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = -1
Query: 410 ALAFFGSTFLLLMVCSPAAMTLSIDSGALNTMKANPRDLPVFGSVFTLILSIHRMLQNDH 231
ALA + F M + +++ + A++ + +DLP+F V + +++H + D
Sbjct: 495 ALASLEAIFNTFMFANNEHLSVLQTALAISRLIGGVKDLPLFFLVDSHRVALHLSVDKDP 554
Query: 230 GAPYXWSPSSAH 195
GA Y + S AH
Sbjct: 555 GADYI-NASFAH 565
>SB_38604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 62 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRK 184
+DN D + N + +GG D D++S E DRK
Sbjct: 117 DDNGEDDYDGNGDNNNDDNDGGDDDNDYDSNETMAFKKDRK 157
>SB_23644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDD 175
+NDN D N N+ +G +S D N + G D+
Sbjct: 19 DNDNSGDDNDNSGDDNDNSGDGNDNSGDGNDSNGDGNDN 57
>SB_4001| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0056)
Length = 508
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 68 NFAQDITTDNQLNGNAE-NGGGDSQDHNSAEAPGRDD 175
++ D D+ NG+ + +GGGD D + ++ G DD
Sbjct: 441 DYDSDGDGDDDDNGDGDVDGGGDGDDDDDSDGDGDDD 477
>SB_54036| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NN+N +I +N N N N ++ ++N+ DDD
Sbjct: 64 NNNNNNNNIKNNNNNNNNNNNKNNNNNNNNNNNNDDDDDD 103
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 119 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTXKELRD 235
NGG + D + A R++ +LFV GL E + +LR+
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLRE 641
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAE 157
N+D+ + DN + +A +GGGD+ D++ ++
Sbjct: 802 NDDDDDDNGDADNGRDNDAHDGGGDNSDYDGSD 834
>SB_25551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +2
Query: 62 NDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
+D+ D D+ + +GGGD D + G DDD
Sbjct: 104 DDDGDDDDDDDDDDDDGGGDGGGDGDDDDDGNGDGGDDD 142
>SB_23204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 116 ENGGGDSQDHNSAEAPGRDDDRK 184
+N GGD D++ + DDD K
Sbjct: 8 DNDGGDDDDNDDVDGDNNDDDHK 30
>SB_23116| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 59 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 178
NNDN ++ +N + N +N D D N+ DDD
Sbjct: 119 NNDNNNKNNNNNNDDDDNNKNDNDDDYDDNNNNNDDYDDD 158
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,279,213
Number of Sequences: 59808
Number of extensions: 315817
Number of successful extensions: 2433
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2236
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1111677931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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