Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0716
         (423 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    88   4e-20
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   2.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   3.7  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   4.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.5  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.6  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    20   8.6  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   8.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 87.8 bits (208), Expect = 4e-20
 Identities = 43/59 (72%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
 Frame = +3

Query: 249 LTGTXLAMLAAQCNKLSSKSPPPLADAAVGKGFHPWKKSP-GAHSPPNAGAIARSQAPS 422
           L GT LAMLAAQCNKLS+KSPPPLADAAVGKGFHPWKKSP GA SP +  +   +Q  S
Sbjct: 32  LRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTS 90



 Score = 22.6 bits (46), Expect = 1.6
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = -1

Query: 390 HLVVNVHQDFSSRDENLFPRQHLLAEAEIYLTICY 286
           H + N   D+SS   +L    HLL+  +  L   Y
Sbjct: 206 HQMANYSTDYSSLTHSLAASNHLLSSGQHLLQDTY 240


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -3

Query: 415 ACERAIAPAFGGECAPGLFFQG*KPFP 335
           A  R+   AF    A G F+Q  +PFP
Sbjct: 181 AASRSRLAAFKRTIALGAFYQPLQPFP 207


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +3

Query: 282 QCNKLSSKSPPPLADAAVGKGFHPWKKSPG 371
           QC  + ++ P P  D  V +     K  PG
Sbjct: 81  QCRSIKNECPEPTCDEPVHRPGRCCKTCPG 110


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 363 FSSRDENLFPRQHLLAEAEIYLT 295
           F+S    +FP +HLL  A  ++T
Sbjct: 184 FNSSVYKVFPVEHLLFIANAFIT 206


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 STGARTRSPTMLITVTSTRKIR 247
           +TG  T +P  + T+T  R+ R
Sbjct: 324 NTGFMTNTPLEVFTITPGRRYR 345


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 182 STGARTRSPTMLITVTSTRKIR 247
           +TG  T +P  + T+T  R+ R
Sbjct: 324 NTGFMTNTPLEVFTITPGRRYR 345


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 311 ASASRCCRGKRFSSLEEKS 367
           ++  R C GK+F+ LE K+
Sbjct: 445 SAGPRNCIGKKFAMLELKA 463


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +2

Query: 371 CTFTTKCW 394
           CT +T+CW
Sbjct: 528 CTASTRCW 535


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 311 ASASRCCRGKRFSSLEEKS 367
           ++  R C GK+F+ LE K+
Sbjct: 445 SAGPRNCIGKKFAMLELKA 463


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 8.6
 Identities = 10/28 (35%), Positives = 12/28 (42%)
 Frame = +3

Query: 303 KSPPPLADAAVGKGFHPWKKSPGAHSPP 386
           +SPPP   +A          SP A  PP
Sbjct: 9   ESPPPAPQSAATPISSSGMTSPAAAPPP 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,328
Number of Sequences: 336
Number of extensions: 1862
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)