Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0716
         (423 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase f...    27   6.9  
At5g11330.1 68418.m01323 monooxygenase family protein low simila...    27   6.9  
At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase f...    26   9.1  
At1g75900.1 68414.m08816 family II extracellular lipase 3 (EXL3)...    26   9.1  

>At5g60510.1 68418.m07588 undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein contains
           putative undecaprenyl diphosphate synthase domain
           [PF01255]; similar to S. cerevisiae dehydrodolichyl
           diphosphate synthetase (DEDOL-PP
           synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
          Length = 272

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -3

Query: 343 PFPTAASASGGGDLLDNLLHWAASIA 266
           P P     +GGGD L N + W  S A
Sbjct: 209 PVPDLVVRTGGGDRLSNFMTWQTSRA 234


>At5g11330.1 68418.m01323 monooxygenase family protein low
           similarity to 2,6-dihydroxypyridine 3-hydroxylase (DHPH)
           [GI:14495302] [Arthrobacter nicotinovorans]; contains
           Pfam profile PF01360: Monooxygenase
          Length = 408

 Score = 26.6 bits (56), Expect = 6.9
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 17  PQLTTEIGSQRDLLIECNRDTSRFNAVLWSRVMCYGDQKE*EFSHGLR*T 166
           P+L   +   +D  +    D+     + W  ++  GD       HGLR T
Sbjct: 279 PELARLMSETKDPFLNVIYDSDPLERIFWGNIVLVGDAAHPTTPHGLRST 328


>At5g60500.1 68418.m07587 undecaprenyl pyrophosphate synthetase
           family protein / UPP synthetase family protein contains
           putative undecaprenyl diphosphate synthase domain
           [PF01255]; similar to S. cerevisiae dehydrodolichyl
           diphosphate synthetase (DEDOL-PP
           synthase)(Rer2)[SP|P35196], a cis-prenyltransferase
          Length = 271

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 343 PFPTAASASGGGDLLDNLLHWAAS 272
           P P     +GGGD L N + W  S
Sbjct: 208 PVPDLVIRTGGGDRLSNFMTWQTS 231


>At1g75900.1 68414.m08816 family II extracellular lipase 3 (EXL3)
           EXL3 (PMID:11431566); similar to anter-specific
           proline-rich protein (APG) SP:P40602 [Arabidopsis
           thaliana]
          Length = 364

 Score = 26.2 bits (55), Expect = 9.1
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +3

Query: 255 GTXLAMLAAQCNKLSSKSPPPLADAAVGKGFHPWKKS 365
           GT    +A  CNK++S   P ++       +HP +K+
Sbjct: 311 GTGAIEVAVLCNKITSSVCPDVSTHVFWDSYHPTEKT 347


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,109,630
Number of Sequences: 28952
Number of extensions: 166913
Number of successful extensions: 447
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 655255392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)