Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0715
         (725 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    25   0.83 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    23   3.3  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   4.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   4.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   5.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    22   5.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   7.7  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 501 RKNHLTFSPNTIKVSKVHENRGNKNKKGTRR 593
           R  HL   P T K++    N+ N N+KGT R
Sbjct: 473 RFTHLQHQPFTYKITV--NNQSNGNRKGTCR 501


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 SLQDMLDIDIKNEIAT 187
           +LQ ++D+D KN+I T
Sbjct: 36  TLQQIIDVDEKNQILT 51


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 SLQDMLDIDIKNEIAT 187
           +LQ ++D+D KN+I T
Sbjct: 36  TLQQIIDVDEKNQILT 51


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 140 SLQDMLDIDIKNEIAT 187
           +LQ ++D+D KN+I T
Sbjct: 36  TLQQIIDVDEKNQILT 51


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 301 WNCYLAT*SNYQC 263
           WNC+    S YQC
Sbjct: 112 WNCWNGEASRYQC 124


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 301 WNCYLAT*SNYQC 263
           WNC+    S YQC
Sbjct: 112 WNCWNGEASRYQC 124


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 292 NSSSFVHNLDLYGSEANAVMVNPN 363
           N +  V N+DLY    N    NPN
Sbjct: 192 NGAVNVDNIDLYEEIFNGNRANPN 215


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 369 DAFKLCRNTSKKCS*RRSVK 428
           D+F   RN+ KKC   R +K
Sbjct: 401 DSFLSKRNSEKKCGSLREIK 420


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +1

Query: 292 NSSSFVHNLDLYGSEANAVMVNPN 363
           N +  + N+DLY    N    NPN
Sbjct: 199 NGAVNIDNIDLYEEIFNGNRANPN 222


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 287 SHVEQLSVSMSVTVACRKNLYQTNLENLIYY*DLWLFH 174
           S  EQ + + S+    R N +  +LEN +    L L H
Sbjct: 312 STCEQANDTPSILHELRNNYFHMDLENNVQSYSLQLLH 349


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 394 PVKSVVKEEASNVLLSSVANRDSESK 471
           PV++V  +   N+LL ++ N  + SK
Sbjct: 664 PVRNVSVDVRDNILLKNLQNPSTGSK 689


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,750
Number of Sequences: 336
Number of extensions: 3409
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)