Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0713
         (645 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_54913| Best HMM Match : Acyltransferase (HMM E-Value=4.2)           31   0.61 
SB_5202| Best HMM Match : Acyltransferase (HMM E-Value=3.5e-13)        31   0.61 
SB_56686| Best HMM Match : Cadherin (HMM E-Value=0)                    29   3.2  
SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)         29   4.3  

>SB_54913| Best HMM Match : Acyltransferase (HMM E-Value=4.2)
          Length = 279

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 396 VFPPNT*CKDGPRLFLRLFSRRTIF*NL*IYKHVFGPRIRTFVERV 259
           +FP  T  +D  R+    F+R+    NL IY++V  PR+R FV  V
Sbjct: 57  IFPEGTNLEDRSRVHSDSFARKN---NLPIYEYVLHPRVRGFVHCV 99


>SB_5202| Best HMM Match : Acyltransferase (HMM E-Value=3.5e-13)
          Length = 326

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 18/46 (39%), Positives = 26/46 (56%)
 Frame = -1

Query: 396 VFPPNT*CKDGPRLFLRLFSRRTIF*NL*IYKHVFGPRIRTFVERV 259
           +FP  T  +D  R+    F+R+    NL IY++V  PR+R FV  V
Sbjct: 104 IFPEGTNLEDRSRVHSDSFARKN---NLPIYEYVLHPRVRGFVHCV 146


>SB_56686| Best HMM Match : Cadherin (HMM E-Value=0)
          Length = 1888

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 1    TIQNPAGYRIVKTWPDRPDTG*LPDIRFISINN 99
            TI+ P    I   W D PDTG L  + FI I +
Sbjct: 1745 TIRLPVNMLIQSGWTDGPDTGRLKKLGFIDIQS 1777


>SB_21467| Best HMM Match : Peptidase_A17 (HMM E-Value=1.1e-22)
          Length = 1043

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 21/75 (28%), Positives = 35/75 (46%)
 Frame = -2

Query: 425 QHRADIENDKFFHPIPDVKTALDYFYDFFPEELFSEICEYTSMYSVQESGRSLNVSIEKC 246
           Q  AD+  D+     P    A+DYF  F+ +E   E+  Y  +++   S     V IE  
Sbjct: 710 QRMADLPKDRLTPAPPFTYCAVDYFGPFYVKEGRKELKRYGVLFTCLASRA---VHIEIA 766

Query: 245 AHL*RSNFLWALQHF 201
            +L   +++ AL+ F
Sbjct: 767 HNLETDSYINALRRF 781


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,530,059
Number of Sequences: 59808
Number of extensions: 399797
Number of successful extensions: 920
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)