Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0711
(733 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains ... 75 6e-14
At3g21070.1 68416.m02663 ATP-NAD kinase family protein contains ... 63 2e-10
At3g21070.2 68416.m02664 ATP-NAD kinase family protein contains ... 59 3e-09
At1g78590.1 68414.m09159 ATP-NAD kinase family protein contains ... 38 0.009
At4g29440.1 68417.m04203 expressed protein contains Pfam profil... 30 1.8
At5g45095.1 68418.m05532 expressed protein 29 2.4
At1g48650.1 68414.m05445 helicase domain-containing protein cont... 29 3.2
At2g15860.1 68415.m01818 expressed protein and genefinder 28 5.6
At3g13360.1 68416.m01681 expressed protein 28 7.3
At4g17330.1 68417.m02600 agenet domain-containing protein contai... 27 9.7
>At1g21640.1 68414.m02709 ATP-NAD kinase family protein contains
similarity to NAD kinase [Homo sapiens]
gi|20070086|gb|AAM01195; contains Pfam domain, PF01513:
ATP-NAD kinase
Length = 985
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/89 (43%), Positives = 58/89 (65%)
Frame = +3
Query: 243 RSASHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICL 422
+ A+ +L H ++M V VE V D + A F V+ + T DL +++DF+ CL
Sbjct: 695 KEAASFLYHQENMNVLVEPEVHD--VFARIPGFGFVQT---FYIQDTSDLHERVDFVACL 749
Query: 423 GGDGTLLHASSLFQQSVPPVMAFHLGSLG 509
GGDG +LHAS+LF+ +VPPV++F+LGSLG
Sbjct: 750 GGDGVILHASNLFKGAVPPVVSFNLGSLG 778
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Frame = +2
Query: 494 LGLVGFLTPFEFNNFQEQVMNVLEGHAAL-----TLRSRLQCVVLRKSQ 625
LG +GFLT F +F++ + V+ G+ L TLR RL+C + RK +
Sbjct: 774 LGSLGFLTSHPFEDFRQDLKRVIHGNNTLDGVYITLRMRLRCEIYRKGK 822
>At3g21070.1 68416.m02663 ATP-NAD kinase family protein contains
Pfam domain, PF01513: ATP-NAD kinase
Length = 530
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 4/88 (4%)
Frame = +3
Query: 258 WLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVK--ERLMTFRASTDD--LTDKIDFIICLG 425
WL K + ++VE V ++ LL+E F V+ E +M + A + L K+D +I LG
Sbjct: 237 WLRTQKGLNIYVEPRVKEE-LLSESSSFNFVQTWEDVMIYDADKEISLLHTKVDLLITLG 295
Query: 426 GDGTLLHASSLFQQSVPPVMAFHLGSLG 509
GDGT+L A+S+F+ VPP++ F +GSLG
Sbjct: 296 GDGTVLWAASMFKGPVPPIVPFSMGSLG 323
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +2
Query: 494 LGLVGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLR 616
+G +GF+TPF +++ + +L+G ++TLR RLQC ++R
Sbjct: 319 MGSLGFMTPFHSEQYRDCLEAILKGPISITLRHRLQCHIIR 359
>At3g21070.2 68416.m02664 ATP-NAD kinase family protein contains
Pfam domain, PF01513: ATP-NAD kinase
Length = 524
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 258 WLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDGT 437
WL K + ++VE V ++ LL+E F V+ S L K+D +I LGGDGT
Sbjct: 237 WLRTQKGLNIYVEPRVKEE-LLSESSSFNFVQTWEDDKEISL--LHTKVDLLITLGGDGT 293
Query: 438 LLHASSLFQQSVPPVMAFHLGSLG 509
+L A+S+F+ VPP++ F +GSLG
Sbjct: 294 VLWAASMFKGPVPPIVPFSMGSLG 317
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/41 (39%), Positives = 29/41 (70%)
Frame = +2
Query: 494 LGLVGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLR 616
+G +GF+TPF +++ + +L+G ++TLR RLQC ++R
Sbjct: 313 MGSLGFMTPFHSEQYRDCLEAILKGPISITLRHRLQCHIIR 353
>At1g78590.1 68414.m09159 ATP-NAD kinase family protein contains
Pfam domain, PF01513: ATP-NAD kinase
Length = 317
Score = 37.5 bits (83), Expect = 0.009
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +3
Query: 402 IDFIICLGGDGTLLHASSLFQQSVP 476
+D +I +GGDGTLLHAS SVP
Sbjct: 76 VDMVITVGGDGTLLHASHFIDDSVP 100
>At4g29440.1 68417.m04203 expressed protein contains Pfam profile:
PF03398 eukaryotic protein of unknown function, DUF292
Length = 1090
Score = 29.9 bits (64), Expect = 1.8
Identities = 26/85 (30%), Positives = 33/85 (38%)
Frame = +3
Query: 153 SGVAEADLVQASPHRAGHQEGSRRPDTGTLRSASHWLVHDKSMVVFVEAAVLDDTLLAEY 332
SGV+ DL + P RA + RR T SAS H S E V DT +
Sbjct: 791 SGVSHKDLEEEIPTRASTRSQDRRTHKTTPASASASYFHTMSSDDEDEKEVHRDTAHIQT 850
Query: 333 GDFTSVKERLMTFRASTDDLTDKID 407
+ S+ R +T KID
Sbjct: 851 RPYISISRRTKGQERRPSLVTAKID 875
>At5g45095.1 68418.m05532 expressed protein
Length = 394
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/33 (45%), Positives = 16/33 (48%)
Frame = +1
Query: 190 LTVLVIKKVHDAQILAPFVQLVTGSFMTKAWWC 288
LTVL+ V D AP V GSF T W C
Sbjct: 287 LTVLLSFVVEDVSCFAPAKLKVMGSFSTSQWQC 319
>At1g48650.1 68414.m05445 helicase domain-containing protein
contains similarity to DEIH-box RNA/DNA helicase
[Arabidopsis thaliana] GI:5881579; contains Pfam
profiles PF04408: Helicase associated domain (HA2),
PF00271: Helicase conserved C-terminal domain, PF00035:
Double-stranded RNA binding motif
Length = 1197
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 77 RRPQYNSLDHAAGL*KIPPWSCKSRIRRRRG*PGTSLPSPCW 202
+ Y++L++ L +P W K+ R+RRG G +P C+
Sbjct: 664 KETSYDALNNTPCL--LPSWISKAAARQRRGRAGRVMPGECY 703
>At2g15860.1 68415.m01818 expressed protein and genefinder
Length = 512
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +3
Query: 135 GHANPGSGVAEADLVQASPHRAG--HQEGSRRPDTGTLRSASHWLVHDKSMVVFVEAAVL 308
G N +G+ D++Q + R H EG R + +H L+ KSM+
Sbjct: 340 GFTNALAGLHVNDMIQRTGGRLESLHSEGVHRLSEMCCFAVTHLLILGKSMISHANKVQD 399
Query: 309 DDT--LLAEYGDFTSVKERLMTFRAST 383
+DT L E+ + + K +L+ +A T
Sbjct: 400 EDTEALKIEWAEDPTEKAKLIRGKAET 426
>At3g13360.1 68416.m01681 expressed protein
Length = 459
Score = 27.9 bits (59), Expect = 7.3
Identities = 14/63 (22%), Positives = 29/63 (46%)
Frame = +3
Query: 207 QEGSRRPDTGTLRSASHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTD 386
+ G++ D + ++ +HW D AVL + L E F + + + ++TD
Sbjct: 250 ENGNKEDDGESKKNNNHWADKDALADSIRSFAVLQEVLWKEVQSFQELGKESVLLHSNTD 309
Query: 387 DLT 395
+L+
Sbjct: 310 ELS 312
>At4g17330.1 68417.m02600 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 1058
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 66 IPERAVPNTTVWTMRQDYEKFRHGHANPGSGVAEADLVQASPHRAGHQEGSR 221
IP + NTT M D G PGSGV+ V+ + H GS+
Sbjct: 928 IPRKDSRNTTASDMESDESAENRG---PGSGVSFKGTVEEQTTSSSHDTGSK 976
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,101,336
Number of Sequences: 28952
Number of extensions: 347234
Number of successful extensions: 938
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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