Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0710
(718 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25552| Best HMM Match : Transket_pyr (HMM E-Value=1.6e-05) 100 1e-21
SB_10097| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_48693| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 9e-08
SB_48694| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0) 32 0.40
SB_4342| Best HMM Match : KA1 (HMM E-Value=0.53) 31 0.71
SB_17672| Best HMM Match : ERM (HMM E-Value=0.13) 31 1.2
SB_28271| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14) 30 2.2
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 3.8
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13626| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023) 28 6.6
SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056) 28 6.6
SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08) 28 6.6
SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12) 28 6.6
SB_29645| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2) 28 6.6
SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14) 28 8.7
SB_49146| Best HMM Match : GntR (HMM E-Value=1.8e-16) 28 8.7
SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41) 28 8.7
SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07) 28 8.7
>SB_25552| Best HMM Match : Transket_pyr (HMM E-Value=1.6e-05)
Length = 405
Score = 100 bits (240), Expect = 1e-21
Identities = 43/55 (78%), Positives = 49/55 (89%)
Frame = +1
Query: 331 CIIDQFISSGQAKWVRQSGIVLLQPHGMEGMGPEHSSARLERFLQMCSDDPDYMP 495
CIIDQFISSGQ KWVRQ+G+V+L PHG EG+GPEHSSAR ERFLQM +DDPD+ P
Sbjct: 79 CIIDQFISSGQDKWVRQTGLVMLLPHGYEGLGPEHSSARPERFLQMSNDDPDFFP 133
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/25 (64%), Positives = 20/25 (80%)
Frame = +2
Query: 2 VDNRTVDWALAEAMAYGSLLKEGIH 76
+ N VDWA+ EA+A+GSLL EGIH
Sbjct: 54 LSNGYVDWAMGEALAFGSLLMEGIH 78
Score = 31.9 bits (69), Expect = 0.53
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 623 LILMTPKSLLRHPECKSSFDDMKEGXNFQ 709
L++ TPKSLLR +S D+M +G +F+
Sbjct: 179 LVIFTPKSLLRLEAARSHVDEMADGTSFR 207
>SB_10097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 31
Score = 59.7 bits (138), Expect = 2e-09
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +1
Query: 331 CIIDQFISSGQAKWVRQSGIVLLQPHGMEGM 423
CIIDQFISSGQ KWVRQ+G+V+L PHG EGM
Sbjct: 1 CIIDQFISSGQDKWVRQTGLVMLLPHGYEGM 31
>SB_48693| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 54.4 bits (125), Expect = 9e-08
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +1
Query: 262 SVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQ 363
S+ NPN L++WEAQFGDF N AQ I+D F+SSG+
Sbjct: 2 SIENPNHLIIWEAQFGDFFNGAQIILDTFVSSGE 35
>SB_48694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +2
Query: 611 FRKPLILMTPKSLLRHPECKSSFDDMKEGXNF 706
FRKPLI++ PK LLR P S+ DM G +F
Sbjct: 4 FRKPLIIVAPKLLLRLPAAMSTLHDMSPGTHF 35
>SB_645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 32.3 bits (70), Expect = 0.40
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -1
Query: 487 SPGRRSTSARTSPNEP-RSARGPSPPCREAAAVQSRTGAPTWPVRWR 350
SP RR T+AR+SP+ P R R P P A PVR R
Sbjct: 152 SPARRRTAARSSPSPPKRQGRSPGRPSNVTAEKNEPETPKRSPVRSR 198
>SB_41995| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 785
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 245 PGH-HTQTVSCCTQCREPGRGTDVPRRSKWPC-RPSGGGARDVCERMCLAQHL 93
PG+ T+ +CC +C E +GT PR + C +GG + MC+++ +
Sbjct: 532 PGYWQTRMKNCCWECTECPQGTISPRYAAPSCSNCTGGRTPNAARTMCISEKM 584
>SB_4342| Best HMM Match : KA1 (HMM E-Value=0.53)
Length = 327
Score = 31.5 bits (68), Expect = 0.71
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 202 GSLVGVQMCQGAVSGLVDLLVVEHVMSVRECASLNI-FTRETHVDALLEQRSVGHRLRER 26
G LV G V+ L++L H M E AS+N F RET + +LE R RL+ER
Sbjct: 185 GRLVACGSHDGTVT-LLELSEGLHTMQRNEKASINATFERETKREKILETRHREMRLKER 243
>SB_17672| Best HMM Match : ERM (HMM E-Value=0.13)
Length = 391
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 508 RGFPGACSPGRRSTSARTSPNEPRSARGPSPP 413
RG+ G SP RR+ +R S R A P+PP
Sbjct: 223 RGYVGVGSPARRNVVSRVSGPPARGALPPTPP 254
>SB_28271| Best HMM Match : 7tm_1 (HMM E-Value=6.2e-14)
Length = 686
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 247 FRGGYSVTNPNALVLWEAQFGDFNNVAQCIIDQFISSGQAKWVRQSGIVL 396
FRG +S + +VLW G N + C++ F S+ + W R+ +++
Sbjct: 613 FRGEFSPSVGFYMVLW----GGKRNTSMCLLKHFASNQRVDWAREVEVLM 658
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = -1
Query: 484 PGRRSTSARTSPNEPRS--ARGPSPPCREAAAVQSRTGAPTWPVRWR 350
P RR N P S AR P P ++A+ + T PVRWR
Sbjct: 1831 PVRRRAHTNAHKNNPHSLRARTPPPSFQKASHSSGTPRSQTPPVRWR 1877
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -3
Query: 251 RNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPSGGGARD 126
R+PGH ++ S + R PG + PRR + R G RD
Sbjct: 438 RSPGHRRRSQSPRRRSRSPGHRSRSPRRGRDRDRDRGRDRRD 479
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -1
Query: 496 GACSPGRRSTSARTSPNEPRSARGPSPPCREAAAVQSRTGAP 371
G CSPG +P A G + PC E TG P
Sbjct: 492 GPCSPGYYCRKGADTPTPGYGALGDAGPCPEGHFCPGSTGEP 533
>SB_50061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1222
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 476 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 526
>SB_22668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 73 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 123
>SB_14964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 492 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 542
>SB_13626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 155
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = -2
Query: 342 VDDALGHVVEVSELGLPQXQG---VRVRYGVAASKPRTPYSDSE 220
VDD + ++E EL +PQ G V + Y V +KP S+SE
Sbjct: 30 VDDVMKQLMENLELEIPQYTGFDPVGLGYSVLDTKPTISESESE 73
>SB_55367| Best HMM Match : Granulin (HMM E-Value=0.00023)
Length = 565
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/58 (31%), Positives = 24/58 (41%)
Frame = +3
Query: 330 VHHRPVHLQRTGQVGAPVRDCTAAASRHGGDGPRALLGSFGEVLADVLRRPGLHAPGK 503
+H P+ + + G+ V D A G G G G+ RRPGLH GK
Sbjct: 318 LHRHPIMRKEKPEHGSHVSDENATRPGFQGKGETGRPGLHGD---GKTRRPGLHGDGK 372
>SB_43452| Best HMM Match : RVT_1 (HMM E-Value=0.0056)
Length = 437
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 30 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 80
>SB_34394| Best HMM Match : RVT_1 (HMM E-Value=8.7e-08)
Length = 1201
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 519 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 569
>SB_31154| Best HMM Match : rve (HMM E-Value=2.5e-12)
Length = 1067
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 443 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 493
>SB_29645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 28.3 bits (60), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -1
Query: 475 RSTSARTSPNEPRSARGPSPPCREAAAVQ 389
R T+P P + R P CR AAA+Q
Sbjct: 6 RIAELSTAPGVPDAPRAPDTVCRSAAAIQ 34
>SB_15371| Best HMM Match : Keratin_B2 (HMM E-Value=1.2)
Length = 223
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 136 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 186
>SB_9739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1552
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 500 PNYTSPTTNAARIVNEGCTKPASEHDVTCSCPQRETTPPRPSELP----FPCTPA 550
>SB_13803| Best HMM Match : rve (HMM E-Value=8.6e-14)
Length = 1447
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -3
Query: 308 PNWASHXTRAFGFVTE*PPRNPGHHTQTVSCCTQCREPGRGTDVPRRSKWPCRPS 144
PN+ S T A V E + H T SC + P R +++P +PC P+
Sbjct: 487 PNYTSPTTNAARIVNEGCTKPASKHDVTCSCPQRETTPPRPSELP----FPCTPA 537
>SB_49146| Best HMM Match : GntR (HMM E-Value=1.8e-16)
Length = 410
Score = 27.9 bits (59), Expect = 8.7
Identities = 23/66 (34%), Positives = 29/66 (43%)
Frame = +2
Query: 8 NRTVDWALAEAMAYGSLLKEGIHVRLSGEDVERGTFSHRHHVLHHQKVDKATYCALAHLY 187
NRT+ AL + A L + LSG+ + R T R+ Q V LAHL
Sbjct: 131 NRTLGRALRQQGASAHLYYD----ELSGDALLRQTLVERYRKWEFQGVSAEEQKQLAHLD 186
Query: 188 PDQAPY 205
QAPY
Sbjct: 187 KLQAPY 192
>SB_40460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +3
Query: 264 RNEPERPGXVGGPVRRLQQRGPVH-HRPVHLQRTGQVGAPVRDCTAAAS 407
R+ RP +GGPVR + +G P RT Q P R A AS
Sbjct: 341 RHTLPRPEPIGGPVRGSEPKGVARADAPPVPARTDQTPRPERPVPAGAS 389
>SB_25525| Best HMM Match : ABC1 (HMM E-Value=1.19993e-41)
Length = 1008
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +3
Query: 45 PTDLCSRRASTCVSLVKMLSEAHSLTDITCS----TTRRSTRPLTAPWHICTPTRLPTLC 212
P C++ S V +LS A S++ +TC+ + S P+T H+ +L
Sbjct: 880 PPVTCTKHLSYHVHQASLLSRAPSISPVTCTKHLLSRAPSISPVTCTKHLPCHVHQASLL 939
Query: 213 ATAHCLSMVSWVSRRLLRNEP 275
+ A +S V+ ++ LL P
Sbjct: 940 SRAPSISPVT-CTKHLLSRAP 959
>SB_20050| Best HMM Match : RVT_1 (HMM E-Value=1.3e-07)
Length = 493
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +3
Query: 123 DITCSTTRRSTRPLTAPWHICTPTRLPTLCATAHCLSMVSWVSRR 257
D+TCS +R T P P P+ LP C A+ M +W+ R
Sbjct: 99 DVTCSCPQRETTP---P----RPSELPFPCTAANNTKMKAWLLNR 136
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,697,576
Number of Sequences: 59808
Number of extensions: 565567
Number of successful extensions: 2180
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2174
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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