Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0709
         (615 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_53977| Best HMM Match : AbfB (HMM E-Value=6e-08)                    29   4.0  
SB_27495| Best HMM Match : VWA (HMM E-Value=0)                         28   5.2  

>SB_53977| Best HMM Match : AbfB (HMM E-Value=6e-08)
          Length = 172

 Score = 28.7 bits (61), Expect = 4.0
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 605 ASTTHKDKLKKHQTXCFLGKGIAIRIPGTPSDRSMP-PPYYLSHPTFVF 462
           AS TH   L KH     + KG  +   GT S  S+  P Y+L H  + F
Sbjct: 45  ASNTHGSLLSKHPGQFRIKKGGFLGKKGTVSIESLKNPGYFLRHKNYNF 93


>SB_27495| Best HMM Match : VWA (HMM E-Value=0)
          Length = 1064

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 155 RSSHAFWFNNTCFFSYLFAYNLRGYFQLRAD 247
           R  H+FWFN+ C       YN +G+ + R++
Sbjct: 647 RKQHSFWFNDVC------GYNQKGFRKFRSE 671


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,929,139
Number of Sequences: 59808
Number of extensions: 380679
Number of successful extensions: 1075
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)