Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0707
(519 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 148 3e-36
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 148 3e-36
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 147 5e-36
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 146 1e-35
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 1e-34
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 118 4e-27
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 3e-14
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 75 3e-14
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 75 5e-14
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 75 5e-14
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 73 2e-13
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 3e-13
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 66 2e-11
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 65 3e-11
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 63 1e-10
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 60 8e-10
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 5e-08
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 52 2e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 50 9e-07
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 38 0.007
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 32 0.25
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 31 0.43
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 30 1.3
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.3
SB_28802| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00055) 28 4.0
SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2) 28 5.3
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 27 9.3
SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
SB_36304| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.3
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 148 bits (358), Expect = 3e-36
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE VDSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 127
Query: 432 DCLQGFQLT 458
DCLQGFQLT
Sbjct: 128 DCLQGFQLT 136
Score = 142 bits (345), Expect = 1e-34
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 232 PRAILVDLSP 261
PRAILVDL P
Sbjct: 61 PRAILVDLEP 70
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 148 bits (358), Expect = 3e-36
Identities = 67/69 (97%), Positives = 67/69 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE VDSVLDVVRKEAESC
Sbjct: 281 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 340
Query: 432 DCLQGFQLT 458
DCLQGFQLT
Sbjct: 341 DCLQGFQLT 349
Score = 147 bits (357), Expect = 4e-36
Identities = 66/79 (83%), Positives = 70/79 (88%)
Frame = +1
Query: 25 IYSSHK*NKMREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYY 204
+YSS KMREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYY
Sbjct: 205 VYSSKLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYY 264
Query: 205 NEASXGKYVPRAILVDLSP 261
NEA+ GKYVPRA+LVDL P
Sbjct: 265 NEATGGKYVPRAVLVDLEP 283
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 147 bits (356), Expect = 5e-36
Identities = 66/69 (95%), Positives = 67/69 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE VDSVLDVVRKEAESC
Sbjct: 13 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESC 72
Query: 432 DCLQGFQLT 458
DC+QGFQLT
Sbjct: 73 DCIQGFQLT 81
Score = 30.7 bits (66), Expect = 0.75
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1
Query: 220 GKYVPRAILVDLSP 261
GKYVPRA+LVDL P
Sbjct: 2 GKYVPRAVLVDLEP 15
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 146 bits (353), Expect = 1e-35
Identities = 65/69 (94%), Positives = 67/69 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAESC
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEAESC 127
Query: 432 DCLQGFQLT 458
DC+QGFQLT
Sbjct: 128 DCIQGFQLT 136
Score = 138 bits (334), Expect = 3e-33
Identities = 59/70 (84%), Positives = 65/70 (92%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREIV +QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 232 PRAILVDLSP 261
PR++L+DL P
Sbjct: 61 PRSVLIDLEP 70
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 142 bits (345), Expect = 1e-34
Identities = 63/70 (90%), Positives = 65/70 (92%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREIVH QAGQCGNQIGAKFWE+ISD HGIDPTG YHGDSDLQLERINVYYNEA+ GKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 232 PRAILVDLSP 261
PRAILVDL P
Sbjct: 61 PRAILVDLEP 70
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVF 326
LEPGTMDSVRSGPFGQIFR DNFVF
Sbjct: 68 LEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 118 bits (283), Expect = 4e-27
Identities = 49/68 (72%), Positives = 58/68 (85%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMD+VR GP G +FR DNFV QSGA NNWAKGHY+EGAE +D++ DV+RKEAE+C
Sbjct: 24 LEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEAENC 83
Query: 432 DCLQGFQL 455
DC+QG QL
Sbjct: 84 DCMQGVQL 91
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 220 GKYVPRAILVDLSP 261
G+YVPR+ILVDL P
Sbjct: 13 GRYVPRSILVDLEP 26
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 75.4 bits (177), Expect = 3e-14
Identities = 30/66 (45%), Positives = 45/66 (68%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D +R+G + Q+F + + G+ A NN+A+GHYT G + +D+VLD +RK A+ C
Sbjct: 488 LEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLADQC 547
Query: 432 DCLQGF 449
LQGF
Sbjct: 548 SGLQGF 553
Score = 70.9 bits (166), Expect = 6e-13
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G + ++ VLD +RK A+ C
Sbjct: 55 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQC 114
Query: 432 DCLQGF 449
LQGF
Sbjct: 115 TGLQGF 120
Score = 59.7 bits (138), Expect = 1e-09
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE V I GQ G Q+G WE+ HGI P G D + + N +++E GK+
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 229 VPRAILVDLSPA 264
VPRA+ VDL P+
Sbjct: 480 VPRAVFVDLEPS 491
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 97 IGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASXGKYVPRAILVDLSP 261
+G WE+ HGI P G D + + N +++E GK+VPRA+ DL P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 75.4 bits (177), Expect = 3e-14
Identities = 34/66 (51%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + V G+ A NN+A+GHYT G E VD VLD +RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 74.9 bits (176), Expect = 4e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD VLD +RK A+ C
Sbjct: 503 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADQC 562
Query: 432 DCLQGF 449
LQGF
Sbjct: 563 TGLQGF 568
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/72 (41%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G QIG WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 229 VPRAILVDLSP 261
VPRA+ VDL P
Sbjct: 495 VPRAVFVDLEP 505
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 74.9 bits (176), Expect = 4e-14
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D+VLD +RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADGC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + + GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ DL P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 74.5 bits (175), Expect = 5e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 69 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLADQC 128
Query: 432 DCLQGF 449
LQGF
Sbjct: 129 TGLQGF 134
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 229 VPRAILVDLSP 261
VPRA+ VDL P
Sbjct: 61 VPRAVFVDLEP 71
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 74.5 bits (175), Expect = 5e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 874 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQC 933
Query: 432 DCLQGF 449
LQGF
Sbjct: 934 TGLQGF 939
Score = 73.7 bits (173), Expect = 8e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 441 LEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLADGC 500
Query: 432 DCLQGF 449
LQGF
Sbjct: 501 TGLQGF 506
Score = 58.8 bits (136), Expect = 2e-09
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + I GQ G QIG WE+ HGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 229 VPRAILVDLSP 261
VPRA+ VDL P
Sbjct: 433 VPRAVFVDLEP 443
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + + GQ G Q+G WE+ HGI P G D + + N +++E GK+
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 229 VPRAILVDLSP 261
VPRA+ DL P
Sbjct: 866 VPRAVFADLEP 876
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 74.5 bits (175), Expect = 5e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD VLD +RK A+ C
Sbjct: 134 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 193
Query: 432 DCLQGF 449
LQGF
Sbjct: 194 TGLQGF 199
Score = 74.5 bits (175), Expect = 5e-14
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C
Sbjct: 655 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQC 714
Query: 432 DCLQGF 449
LQGF
Sbjct: 715 TGLQGF 720
Score = 60.5 bits (140), Expect = 8e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
+RE + I GQ G QIG WE+ HGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 646 HVPRAVFVDLEP 657
Score = 60.1 bits (139), Expect = 1e-09
Identities = 29/71 (40%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + I GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 229 VPRAILVDLSP 261
VPRA+ VDL P
Sbjct: 574 VPRAVFVDLEP 584
Score = 59.7 bits (138), Expect = 1e-09
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGKY 228
RE + + GQ G QIG WE+ HGI P G D + + N +++E GK+
Sbjct: 66 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 125
Query: 229 VPRAILVDLSP 261
VPRA+ VDL P
Sbjct: 126 VPRAVFVDLEP 136
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD RK A+ C
Sbjct: 70 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLADQC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.9 bits (141), Expect = 6e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 71.7 bits (168), Expect = 3e-13
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D +R+G + Q+F + + G+ A NN+A+GHYT G E +D LD +RK A+ C
Sbjct: 35 LEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQC 94
Query: 432 DCLQGF 449
LQGF
Sbjct: 95 TGLQGF 100
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 184 ERINVYYNEASXGKYVPRAILVDLSP 261
+ N ++ E GK+VPRA+ VDL P
Sbjct: 12 DSFNTFFAETGAGKHVPRAVFVDLEP 37
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = +3
Query: 270 DSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGF 449
D VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 67.7 bits (158), Expect = 5e-12
Identities = 28/66 (42%), Positives = 42/66 (63%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + ++ + + G+ A NN+A+GHYT G E V+ V+D +RK + C
Sbjct: 981 LEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQC 1040
Query: 432 DCLQGF 449
LQGF
Sbjct: 1041 SGLQGF 1046
Score = 34.7 bits (76), Expect = 0.046
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 205 NEASXGKYVPRAILVDLSP 261
+EA+ GKYVPRA+LVDL P
Sbjct: 965 SEAAAGKYVPRAVLVDLEP 983
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 276 VRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGF 449
VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK A+ C LQGF
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 60
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 65.3 bits (152), Expect = 3e-11
Identities = 27/42 (64%), Positives = 34/42 (80%)
Frame = +3
Query: 330 QSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGFQL 455
Q+ A NNWAKG YTEGAE +DS +D +RK AE+CD +QGFQ+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQI 43
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +3
Query: 276 VRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGF 449
+R+G + Q+F + + G+ A NN+A+GHYT G E +D LD +RK A+ C LQGF
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGF 60
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQ--LERINVYYNEASXGK 225
MRE + + GQ G QIG WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 226 YVPRAILVDLSPA 264
+VPRA+ VDL P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 60.5 bits (140), Expect = 8e-10
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G QIG WE+ HGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +3
Query: 312 DNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGF 449
+ + G+ A NN+A+GHYT G + VD VLD +RK A+ C LQGF
Sbjct: 80 EQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGF 125
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 54.4 bits (125), Expect = 5e-08
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 276 VRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRK 416
VR+G + Q+F + + G+ A NN+A+GHYT G E +D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = +3
Query: 336 GAGNNWAKGHYTEGAEXVDSVLDVVRKEAESCDCLQGFQLTTLEL 470
G+GNNWA G G + +D VLD+V++E E CD L GF LT L L
Sbjct: 104 GSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF-LTLLSL 147
Score = 31.5 bits (68), Expect = 0.43
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +1
Query: 61 IVHIQAGQCGNQIGAKFWEII 123
IV +Q GQCGNQIG + +++I
Sbjct: 3 IVTLQLGQCGNQIGRELFDLI 23
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +3
Query: 276 VRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRK 416
VR G + +F D + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLER----INVYYNEASX 219
MRE + I GQ G QIG WE+ HGI P G H SD +R + +++E +
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFSETAS 253
Query: 220 GKY 228
GK+
Sbjct: 254 GKH 256
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/35 (48%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 109 FWEIISDXHGIDPTGAYHG-DSDLQLERINVYYNE 210
FWE+I++ HGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = +3
Query: 306 RXDNFVFGQSGAGNNWAKGHYTE-----GAEXVDSVLDVVRKEAESCDCLQG 446
R N + G+ G GNN+A G++ G + +D +RKE E CD G
Sbjct: 65 RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNW 353
+E G ++++ GP +F + SG GNNW
Sbjct: 82 MEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 31.5 bits (68), Expect = 0.43
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +3
Query: 408 VRKEAESCDCLQGFQL 455
+RKEAE CD +QGFQL
Sbjct: 1 MRKEAEDCDAIQGFQL 16
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 427 DSASFRTTSKTESTXSAPSV*CPLAQL 347
DSASFR +S + + SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 51 CPLKEMLDTPLCPLKEMLDTPLCP 74
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 7 CPLKEMLNTPLCPLKEMLDTPLCP 30
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 40 CPLKEMLNTPLCPLKEMLDTPLCP 63
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 73 CPLKEMLNTPLCPLKEMLNTPLCP 96
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 128 CPLKEMLNTPLCPLKEMLNTPLCP 151
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 139 CPLKEMLNTPLCPLKEMLNTPLCP 162
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 150 CPLKEMLNTPLCPLKEMLNTPLCP 173
Score = 27.1 bits (57), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 364 CPLAQLLPAPDCPKTKLSXRKICP 293
CPL ++L P CP ++ +CP
Sbjct: 161 CPLKEMLNTPLCPLKEMLDAPLCP 184
>SB_28802| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00055)
Length = 411
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
Frame = +1
Query: 67 HIQAGQCGNQIGAKFWEI-ISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVPRAI 243
H+ Q K W I +SD + Y D ++ +VY + K A+
Sbjct: 184 HVYTNQPQCITKTKVWNIGLSDHLPVCVVRRYKKKQDHAADKNHVYISYRDCKKLDEEAL 243
Query: 244 LVDLSPAPW 270
L DL APW
Sbjct: 244 LKDLDEAPW 252
>SB_8335| Best HMM Match : Dehydrin (HMM E-Value=7.2)
Length = 531
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 352 GPRDTTRRVLXSSIQF*TSFERKRNRVIASRDSN*QHSNCGGTGS 486
G R+ R Q+ +ER R V + DS +HSN TGS
Sbjct: 420 GRREQRREANLKGNQWDPKWERNRAAVNGNADSMGRHSNSSSTGS 464
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.1 bits (57), Expect = 9.3
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISD---XHGIDPTGAYHGDSDLQLERINVYYNEASXG 222
+RE++ +Q G N +G +W I G P + D L E + V E
Sbjct: 27 VREVITLQFGHYANFVGTHWWNIQESSFCYDGASPKSEINHDC-LFREGLTVTGQET--- 82
Query: 223 KYVPRAILVDL 255
Y PR +L DL
Sbjct: 83 -YTPRLLLYDL 92
>SB_45210| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 675
Score = 27.1 bits (57), Expect = 9.3
Identities = 18/57 (31%), Positives = 23/57 (40%)
Frame = -3
Query: 403 SKTESTXSAPSV*CPLAQLLPAPDCPKTKLSXRKICPKGPERTESMVPGSSRRGWRG 233
SKT S ++P CP + C + S P P R+ S P SR RG
Sbjct: 57 SKTRSRSASP---CPPISKKISTSCDRRDRSRSYSSPVSPSRSNSSSPRMSRSAKRG 110
>SB_36304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 98
Score = 27.1 bits (57), Expect = 9.3
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = -3
Query: 337 PDCPKTKLSXRKICPKGPERTESM-VPGSSRRGWRGARTCRXRLHCSIH*CAPTASQSPH 161
P+ K+ +I G +TE + VPGS RR R + R A SQS H
Sbjct: 1 PEQTKSGHERAEIAQLGERQTEDLKVPGSIRRVCRNSEKSRVSAFFKPFLLAGALSQSRH 60
Query: 160 G 158
G
Sbjct: 61 G 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,923,501
Number of Sequences: 59808
Number of extensions: 248618
Number of successful extensions: 750
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 730
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1160542895
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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