Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0707
(519 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 142 2e-34
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 142 2e-34
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 142 2e-34
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 141 2e-34
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 140 5e-34
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 139 9e-34
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 138 2e-33
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 138 2e-33
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 138 3e-33
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 73 9e-14
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 73 9e-14
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 73 2e-13
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 73 2e-13
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 73 2e-13
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 73 2e-13
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 72 3e-13
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 66 1e-11
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 66 1e-11
At4g37190.1 68417.m05265 expressed protein 33 0.15
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 30 1.1
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 29 1.4
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 5.7
At1g45201.2 68414.m05185 lipase class 3 family protein Since thi... 27 5.7
At4g20990.1 68417.m03038 carbonic anhydrase family protein simil... 27 7.6
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 142 bits (343), Expect = 2e-34
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGP+GQIFR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 123 bits (296), Expect = 8e-29
Identities = 51/70 (72%), Positives = 61/70 (87%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIGAKFWE++ HGID TG Y G++DLQLER+NVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQLERVNVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 142 bits (343), Expect = 2e-34
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 122 bits (294), Expect = 1e-28
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIGAKFWE+I HGID TG GD+DLQLERINVY+NEAS GKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQLERINVYFNEASGGKYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 142 bits (343), Expect = 2e-34
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVRSGP+GQIFR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 123 bits (297), Expect = 6e-29
Identities = 52/70 (74%), Positives = 62/70 (88%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIG+KFWE+++ HGID TG Y GDS+LQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 141 bits (342), Expect = 2e-34
Identities = 61/68 (89%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE +D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 129 DCLQGFQV 136
Score = 124 bits (299), Expect = 4e-29
Identities = 55/71 (77%), Positives = 62/71 (87%), Gaps = 1/71 (1%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGD-SDLQLERINVYYNEASXGKY 228
MREI+HIQ GQCGNQIG+KFWE+I D HGID TG Y GD +DLQLERINVYYNEAS G+Y
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGDTADLQLERINVYYNEASGGRY 60
Query: 229 VPRAILVDLSP 261
VPRA+L+DL P
Sbjct: 61 VPRAVLMDLEP 71
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 140 bits (339), Expect = 5e-34
Identities = 60/68 (88%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGP+GQIFR DNFVFGQSGAGNNWAKGHYTEGAE +D+VLDVVRKEAE+C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 129 DCLQGFQV 136
Score = 128 bits (310), Expect = 2e-30
Identities = 55/71 (77%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDS-DLQLERINVYYNEASXGKY 228
MREI+H+Q GQCGNQIG+KFWE+I D HG+DPTG Y+GDS DLQLERINVYYNEAS G+Y
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGDSADLQLERINVYYNEASGGRY 60
Query: 229 VPRAILVDLSP 261
VPRA+L+DL P
Sbjct: 61 VPRAVLMDLEP 71
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 139 bits (337), Expect = 9e-34
Identities = 60/68 (88%), Positives = 66/68 (97%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDSVR+GP+GQIFR DNFVFGQSGAGNNWAKGHYTEGAE +D+VLDVVRKEAE+C
Sbjct: 68 LEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 130 bits (313), Expect = 7e-31
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIG+KFWE++ D HGIDPTG Y G+SDLQLER+NVYYNEAS G+YV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGNSDLQLERVNVYYNEASCGRYV 60
Query: 232 PRAILVDLSP 261
PRAIL+DL P
Sbjct: 61 PRAILMDLEP 70
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 138 bits (335), Expect = 2e-33
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGP+GQ FR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 128 bits (310), Expect = 2e-30
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIGAKFWE++ HGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 138 bits (335), Expect = 2e-33
Identities = 60/68 (88%), Positives = 65/68 (95%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGP+GQ FR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 128 bits (310), Expect = 2e-30
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIGAKFWE++ HGIDPTG Y GDSDLQLERINVYYNEAS G++V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQLERINVYYNEASCGRFV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 138 bits (333), Expect = 3e-33
Identities = 61/68 (89%), Positives = 65/68 (95%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEPGTMDS+RSGPFGQIFR DNFVFGQSGAGNNWAKGHYTEGAE +DSVLDVVRKEAE+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 432 DCLQGFQL 455
DCLQGFQ+
Sbjct: 128 DCLQGFQV 135
Score = 124 bits (300), Expect = 3e-29
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYV 231
MREI+HIQ GQCGNQIGAKFWE+I D HGID TG Y GDS LQLERI+VY+NEAS GKYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQLERIDVYFNEASGGKYV 60
Query: 232 PRAILVDLSP 261
PRA+L+DL P
Sbjct: 61 PRAVLMDLEP 70
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 73.3 bits (172), Expect = 9e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD VRK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 225
MREI+ I GQ G Q+G WE+ HGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 73.3 bits (172), Expect = 9e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD VRK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 65.7 bits (153), Expect = 2e-11
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 225
MREI+ I GQ G Q+G WE+ HGI P G D+ + + + N +++E GK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 63.3 bits (147), Expect = 9e-11
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G Q+G WE+ HGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 63.3 bits (147), Expect = 9e-11
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G Q+G WE+ HGI P G GD + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 72.5 bits (170), Expect = 2e-13
Identities = 32/66 (48%), Positives = 44/66 (66%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD LD +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDL--QLERINVYYNEASXGK 225
MRE + I GQ G Q+G WE+ HGI P G D + + N +++E GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ VDL P
Sbjct: 61 HVPRAVFVDLEP 72
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 71.7 bits (168), Expect = 3e-13
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQSGAGNNWAKGHYTEGAEXVDSVLDVVRKEAESC 431
LEP +D VR+G + Q+F + + G+ A NN+A+GHYT G E VD+ L+ +RK A++C
Sbjct: 70 LEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNC 129
Query: 432 DCLQGF 449
LQGF
Sbjct: 130 TGLQGF 135
Score = 65.3 bits (152), Expect = 2e-11
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQL--ERINVYYNEASXGK 225
MREI+ I GQ G Q+G WE+ HGI P G DS + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 226 YVPRAILVDLSP 261
+VPRA+ +DL P
Sbjct: 61 HVPRAVFLDLEP 72
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVP 234
REI+ +Q GQCGNQIG +FW+ + HGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 235 RAILVDLSP 261
RA+L+DL P
Sbjct: 63 RALLIDLEP 71
Score = 53.2 bits (122), Expect = 1e-07
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQ--SGAGNNWAKGHYTEGAEXVDSVLDVVRKEAE 425
LEP ++ +++G + ++ +N GAGNNWA G Y +G + ++D++ +EA+
Sbjct: 69 LEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 426 SCDCLQGFQL 455
D L+GF L
Sbjct: 128 GSDSLEGFVL 137
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/69 (42%), Positives = 43/69 (62%)
Frame = +1
Query: 55 REIVHIQAGQCGNQIGAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVP 234
REI+ +Q GQCGNQIG +FW+ + HGI G + +R +V++ +A Y+P
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 235 RAILVDLSP 261
RA+L+DL P
Sbjct: 63 RALLIDLEP 71
Score = 52.8 bits (121), Expect = 1e-07
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Frame = +3
Query: 252 LEPGTMDSVRSGPFGQIFRXDNFVFGQ--SGAGNNWAKGHYTEGAEXVDSVLDVVRKEAE 425
LEP ++ +++G + ++ +N GAGNNWA G Y +G + ++D++ +EA+
Sbjct: 69 LEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASG-YHQGKGVEEEIMDMIDREAD 127
Query: 426 SCDCLQGFQL 455
D L+GF L
Sbjct: 128 GSDSLEGFVL 137
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 32.7 bits (71), Expect = 0.15
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 52 MREIVHIQAGQCGNQIGAKFWEIISDXHGI--DP-TGAYHGDSDLQLERI-NVYYNEASX 219
MREIV IQ G+ N +G+ FW + G+ DP + + +L ++ + +
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGLASDPESDPIFRNHNLDMDVLYRSGETQQGV 60
Query: 220 GKYVPRAILVDLSPA 264
Y PR + V+L A
Sbjct: 61 ATYTPRLVSVNLKGA 75
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 405 VVRKEAESCDCLQGF 449
VVRKEAE+C+CLQ F
Sbjct: 7 VVRKEAENCNCLQVF 21
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 29.5 bits (63), Expect = 1.4
Identities = 22/75 (29%), Positives = 31/75 (41%)
Frame = -3
Query: 448 NPWRQSHDSASFRTTSKTESTXSAPSV*CPLAQLLPAPDCPKTKLSXRKICPKGPERTES 269
N R DSA+ ++S ++ S+ S + PAP P L ICP G +
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 268 MVPGSSRRGWRGART 224
M SR G+ T
Sbjct: 154 MTQSRSRSDVLGSGT 168
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 58 EIVHIQAGQCGNQIGAKFWEIISD 129
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g45201.2 68414.m05185 lipase class 3 family protein Since this
genomic sequence region is unfinished, the annotated
gene may be missing a stop codon or start codon
Length = 479
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/37 (27%), Positives = 19/37 (51%)
Frame = -1
Query: 468 IRVLSVGIPGGNHTIPLPFERRLKLNRRXQHPPCSVP 358
+RV+ + PGG++ P + +L + PP + P
Sbjct: 435 VRVVGIVFPGGSNHFPFDYVNSTRLGGLVRPPPTTTP 471
>At4g20990.1 68417.m03038 carbonic anhydrase family protein similar
to storage protein (dioscorin) [Dioscorea cayenensis]
GI:433463; contains Pfam profile PF00194:
Eukaryotic-type carbonic anhydrase
Length = 267
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = +1
Query: 100 GAKFWEIISDXHGIDPTGAYHGDSDLQLERINVYYNEASXGKYVPRAILV 249
G + W I+ + TG Y DL ER+++ +++A +Y P ++
Sbjct: 45 GPEGWGKINPHWKVCNTGRYQSPIDLTNERVSLIHDQAWTRQYKPAPAVI 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,787,661
Number of Sequences: 28952
Number of extensions: 169349
Number of successful extensions: 464
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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