Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0704
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.46 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   2.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   2.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   3.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   7.5  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 24.6 bits (51), Expect = 0.46
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 353 STCFCSTTRNKCAT 394
           +TCFC    NKC T
Sbjct: 694 TTCFCENGNNKCFT 707



 Score = 21.0 bits (42), Expect = 5.7
 Identities = 5/11 (45%), Positives = 8/11 (72%)
 Frame = -2

Query: 148 CFLQKCPSLSC 116
           CF  +CP ++C
Sbjct: 705 CFTMECPQVTC 715


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 141 RKHQDREDATR*SVKADRCPGEY 209
           RKHQ +E         D+CP +Y
Sbjct: 21  RKHQKQESRDEEYEATDQCPEKY 43


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 13/50 (26%), Positives = 24/50 (48%)
 Frame = -2

Query: 412 RTQSGSSCALVPCRRTKTGACDQSSACRLLAFTVFCILVFKDIHNMRWAE 263
           R+ + S  A+    R K G CD+ +   +L F+V    + +D   + W +
Sbjct: 148 RSTAPSVSAISRLLRGKGGECDEITIQAILEFSVTNPTIKEDFCAVLWKD 197


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 207 YSSAAQGLNRVITTGENF 260
           YS+A Q LN+++  GE +
Sbjct: 552 YSAATQDLNKLLRKGEKW 569


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 145 NIRTVRMLQDSLSKLIDVLENIHQL 219
           ++R VR   +S+ +L+D   NI+ L
Sbjct: 218 DLRRVRKNYNSICELVDAFNNIYGL 242


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 215 SCTRPQPCDHYWGKLRLCPSHVVY 286
           SC R   C   + +L+ CP+ +V+
Sbjct: 169 SCNRYWQCQGGYPRLQRCPAMLVF 192


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 145 NIRTVRMLQDSLSKLIDVLENIHQLHKAS 231
           N   +++L+D  S L+D+ +N    H  S
Sbjct: 342 NDEVLQVLEDIYSDLLDLTDNNELFHLGS 370


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +1

Query: 136 FEGNIRTVRMLQDSLSKLIDVLENIHQLHKASTV*SLLGK 255
           F GN+R V    + L  L D L     L +     +LLGK
Sbjct: 318 FLGNLRIVDFSHNRLRSLPDNLFRETGLERLDVSHNLLGK 357


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,384
Number of Sequences: 336
Number of extensions: 2197
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)