Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0698
         (718 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.4  
U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.           22   4.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.6  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = -3

Query: 341 IVWCKPYSQGSTVPQFSIQFTFCSLCINS*SILMNPKF 228
           IV+   ++QG T P F++ + +C  C N+ ++ +   F
Sbjct: 140 IVFILFFAQGLTSPIFNLVYVYC--CDNNFNVFLRQVF 175


>U61151-1|AAB41306.1|   45|Tribolium castaneum TATH1 protein.
          Length = 45

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 463 RVFPLSSTFT*ALSIFPNISNERYNSSFET 374
           R+  L+  F     + P++ N+R  S FET
Sbjct: 9   RMNSLNDAFDRLRDVVPSLGNDRKLSKFET 38


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 306 SRTLRVRFAPHNSAVRV 356
           SR   VRF PH   V V
Sbjct: 482 SRPFEVRFNPHTGRVEV 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,454
Number of Sequences: 336
Number of extensions: 3456
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19051215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)