Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0684
(632 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 166 3e-40
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 145 9e-34
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 134 2e-30
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 120 2e-26
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 112 6e-24
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 105 1e-21
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 104 2e-21
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 96 7e-19
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 96 7e-19
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 91 2e-17
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 86 8e-16
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 77 4e-13
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 74 3e-12
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 73 4e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 70 4e-11
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 68 2e-10
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 66 7e-10
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 64 2e-09
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 59 1e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 57 4e-07
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 52 1e-05
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 49 1e-04
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 48 1e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 2e-04
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 46 6e-04
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 46 6e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 44 0.002
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 41 0.028
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.26
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.35
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia fuc... 35 1.9
UniRef50_Q6C857 Cluster: Similarities with sp|P43583 Saccharomyc... 34 2.5
UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4; Endopte... 34 3.3
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 33 4.3
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.7
UniRef50_Q9RKR4 Cluster: Putative integral membrane protein; n=2... 33 7.5
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 7.5
UniRef50_Q41B71 Cluster: Putative uncharacterized protein precur... 33 7.5
UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3; Proteo... 33 7.5
UniRef50_Q8IE44 Cluster: Putative uncharacterized protein MAL13P... 33 7.5
UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1; ... 32 10.0
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 166 bits (404), Expect = 3e-40
Identities = 77/82 (93%), Positives = 80/82 (97%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
RVRKNTEARRKGRHCGFGKRK
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRK 82
Score = 129 bits (312), Expect = 5e-29
Identities = 64/112 (57%), Positives = 73/112 (65%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
KGTANARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY
Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141
Query: 433 IHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRPFAREDE 588
IH+KKAEK R+KML+DQAEARR KVR + +++ A+EDE
Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDE 193
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 145 bits (351), Expect = 9e-34
Identities = 67/82 (81%), Positives = 73/82 (89%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
AR RKNT ARRKGRH G GKRK
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 122 bits (293), Expect = 1e-26
Identities = 57/122 (46%), Positives = 77/122 (63%)
Frame = +1
Query: 223 KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 402
KG + + KGTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 403 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRPFARE 582
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K + L ++ + ++E
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTKEARKRREERLQAKKEEIIKTLSKE 191
Query: 583 DE 588
+E
Sbjct: 192 EE 193
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 134 bits (323), Expect = 2e-30
Identities = 61/74 (82%), Positives = 66/74 (89%)
Frame = +2
Query: 35 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 214
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 215 ARRKGRHCGFGKRK 256
ARRKGRH G GKRK
Sbjct: 61 ARRKGRHMGIGKRK 74
Score = 109 bits (263), Expect = 4e-23
Identities = 51/90 (56%), Positives = 63/90 (70%)
Frame = +1
Query: 223 KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 402
KG + + KGTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 403 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 492
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 120 bits (290), Expect = 2e-26
Identities = 55/82 (67%), Positives = 65/82 (79%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R RKN ARRKGRH G GKRK
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRK 82
Score = 104 bits (250), Expect = 2e-21
Identities = 52/107 (48%), Positives = 65/107 (60%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
KGTA+ARMPQK LW A KID+HLYH LY + KGN FKNKRVL+++
Sbjct: 82 KGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDH 141
Query: 433 IHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRPF 573
IH+KKAE+ R K LSDQAEA R + R ++ L R++ F
Sbjct: 142 IHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKKAVIESF 188
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 112 bits (270), Expect = 6e-24
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
AR RK EA+ GRH G G+R+
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRRE 102
Score = 86.2 bits (204), Expect = 6e-16
Identities = 45/112 (40%), Positives = 65/112 (58%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
+G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+
Sbjct: 102 EGSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEH 161
Query: 433 IHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRPFAREDE 588
IH+ K EK + + L++Q A+ + ++ + AR ++R R AR D+
Sbjct: 162 IHKIKNEKKKERQLAEQLAAKHLRDEQNRNKARK-QELKKREKERERARRDD 212
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 105 bits (251), Expect = 1e-21
Identities = 53/95 (55%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
+GT AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVLME
Sbjct: 102 RGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEA 161
Query: 433 IHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 531
IH+ KAEKAR K L+DQ EARR NK R AR
Sbjct: 162 IHKSKAEKAREKSLADQFEARRAKNKAVRERKIAR 196
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 175
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 176 ---------------AVHSRARVRKNTEARRKGRHCGFGKRK 256
+HSRAR + A+R GRH G+GKR+
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKRR 102
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 104 bits (249), Expect = 2e-21
Identities = 54/82 (65%), Positives = 61/82 (74%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
A KNT KGRH GK K
Sbjct: 61 AHCEKNT---LKGRHMVIGKGK 79
Score = 83.8 bits (198), Expect = 3e-15
Identities = 43/123 (34%), Positives = 66/123 (53%)
Frame = +1
Query: 211 RGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 390
+ T KG + + KGTAN +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 391 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRP 570
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + +K + +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 571 FAR 579
F +
Sbjct: 185 FLK 187
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 95.9 bits (228), Expect = 7e-19
Identities = 48/109 (44%), Positives = 67/109 (61%)
Frame = +1
Query: 187 PRPCPQKHRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 366
P +KH G +G + E+GTANARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 367 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRR 513
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR+K ++
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSKTKK 623
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 95.9 bits (228), Expect = 7e-19
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
R+R E + GRH G GKRK
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRK 82
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/84 (39%), Positives = 49/84 (58%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
KG+ N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E+
Sbjct: 82 KGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEF 141
Query: 433 IHRKKAEKARTKMLSDQAEARRNK 504
IH+ K E+ R + D+ + R K
Sbjct: 142 IHKAKNEQKRKEEFLDKFKLMREK 165
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 91.5 bits (217), Expect = 2e-17
Identities = 36/82 (43%), Positives = 62/82 (75%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
R R E ++KGRH G G RK
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRK 82
Score = 49.2 bits (112), Expect = 8e-05
Identities = 26/70 (37%), Positives = 32/70 (45%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
KG ARM +KELW KKIDR Y LY++AKG FK+K L +
Sbjct: 82 KGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMF 141
Query: 433 IHRKKAEKAR 462
+ K R
Sbjct: 142 LEEHNLLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 85.8 bits (203), Expect = 8e-16
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKR 253
R RK EA++KGRH G GKR
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKR 81
Score = 56.0 bits (129), Expect = 7e-07
Identities = 30/99 (30%), Positives = 52/99 (52%)
Frame = +1
Query: 196 CPQKHRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 375
C ++ KG + GTANARMPQK++W +I + +
Sbjct: 63 CRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRV 122
Query: 376 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEA 492
Y +AKG++FK++ + + I ++KA++ R K L++QA+A
Sbjct: 123 FYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQAKA 161
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 77.0 bits (181), Expect = 4e-13
Identities = 38/87 (43%), Positives = 49/87 (56%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
+GT ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL+E+
Sbjct: 82 RGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEH 141
Query: 433 IHRKKAEKARTKMLSDQAEARRNKVRR 513
I + E+ K ++ E RR K +
Sbjct: 142 IVGMQKEQELEKKKKEELEQRRKKAEQ 168
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
R+R A+R GRH G GKR+
Sbjct: 61 GRIRARHAAKRLGRHSGHGKRR 82
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/76 (40%), Positives = 51/76 (67%)
Frame = +2
Query: 29 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 208
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 209 TEARRKGRHCGFGKRK 256
E ++KGR G G RK
Sbjct: 66 HEKKKKGRRRGPGSRK 81
Score = 39.1 bits (87), Expect = 0.087
Identities = 21/64 (32%), Positives = 27/64 (42%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
KG AR K W K ID Y LY K KGN+FK++ L+ Y
Sbjct: 81 KGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLY 140
Query: 433 IHRK 444
+ +K
Sbjct: 141 LKQK 144
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/79 (39%), Positives = 54/79 (68%)
Frame = +2
Query: 20 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 199
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 200 RKNTEARRKGRHCGFGKRK 256
+K E R+KGR G G R+
Sbjct: 66 KKLKEQRKKGRRRGPGSRR 84
Score = 42.7 bits (96), Expect = 0.007
Identities = 22/68 (32%), Positives = 30/68 (44%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 432
+G A AR P KE W + KIDR +Y LY AKG F+++ L Y
Sbjct: 84 RGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLY 143
Query: 433 IHRKKAEK 456
+ + K
Sbjct: 144 MREHELLK 151
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +2
Query: 35 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 205
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 70.1 bits (164), Expect = 4e-11
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
R R E R G G G RK
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRK 82
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/78 (46%), Positives = 48/78 (61%)
Frame = +2
Query: 23 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 202
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 203 KNTEARRKGRHCGFGKRK 256
T ARR+G H G KRK
Sbjct: 90 --TLARRRGWHMGIRKRK 105
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +1
Query: 352 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 510
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K +
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCKTK 162
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
R R+ G G G RK
Sbjct: 61 GRARERDAKESYGHKKGAGSRK 82
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 64.5 bits (150), Expect = 2e-09
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = +1
Query: 340 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 504
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR+K
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSK 112
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/82 (32%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +2
Query: 29 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 190
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 191 ARVRKNTEARRKGRHCGFGKRK 256
+R RK + KGR G G RK
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRK 87
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +2
Query: 32 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 211
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 212 EARRKGRHCGFG 247
E KGR G G
Sbjct: 67 EQLAKGRRRGEG 78
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 52.0 bits (119), Expect = 1e-05
Identities = 36/94 (38%), Positives = 46/94 (48%)
Frame = -3
Query: 459 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 280
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 279 WHTRIGSTFLLPKPQ*RPFLRASVFLRTRAREWT 178
+ FL P PF R+ VF R RAREWT
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +2
Query: 23 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 196
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 197 VRKNTEARRKGRHCGFGKRK 256
+ RRKGR G G+RK
Sbjct: 64 SKVRHLQRRKGRRRGMGRRK 83
Score = 40.3 bits (90), Expect = 0.038
Identities = 24/77 (31%), Positives = 31/77 (40%)
Frame = +1
Query: 205 KHRGT*KGSSLWLW*EKGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 384
+H KG + KG A AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 385 KAKGNVFKNKRVLMEYI 435
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = -3
Query: 501 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQ 322
+AA L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V +Q
Sbjct: 67 LAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQQ 126
Query: 321 FS*NPLSLYP*FLLWHTRIGSTFLL 247
+ + L+L P L HT + T L
Sbjct: 127 ATEDTLALNPESLRRHTSLPGTAAL 151
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/93 (30%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +2
Query: 17 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 196
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 197 VR-KNTEARRKGRHCGFGKRKVLPMRVCHRRNY 292
+ K + ++G G K+ + RV ++ Y
Sbjct: 64 AQHKRRQKAKRGSKAG-SKQGRMGARVGKKQVY 95
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +2
Query: 32 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 211
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 212 EARRKGRHCGFGKRK 256
++KGR G G RK
Sbjct: 65 IKKKKGRRRGHGSRK 79
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 46.4 bits (105), Expect = 6e-04
Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Frame = +2
Query: 11 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 187
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 188 RARV---RKNTEARRKGRHCGFGKRK 256
R+ RK + +G+ G K K
Sbjct: 60 GGRLKERRKKRSLKSEGKKSGSRKGK 85
Score = 37.5 bits (83), Expect = 0.26
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +1
Query: 253 KGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 408
KG AR K++W K IDRH Y LY+K KG +K
Sbjct: 83 KGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +1
Query: 346 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 456
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 38 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 169
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 44.4 bits (100), Expect = 0.002
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +2
Query: 17 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 196
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 197 VRKNTEARRKGRHCGFGKRK 256
+ ++ G G G+RK
Sbjct: 62 KKLRKAKKQSGLKRGIGRRK 81
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2
Query: 172 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 56
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 40.7 bits (91), Expect = 0.028
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -2
Query: 256 LSLTKATVTTLSTCLCVFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLI 98
L L A + L + VF+ G+D ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 111 LPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.5 bits (83), Expect = 0.26
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +2
Query: 17 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 196
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 197 VRKNTEARRK 226
+ R K
Sbjct: 64 AQTKKAQRNK 73
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.1 bits (82), Expect = 0.35
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 382 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 504
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.4
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +2
Query: 29 QKRLAASVMRCGKKKVWLDPNEINEIAN 112
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 34.7 bits (76), Expect = 1.9
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = -2
Query: 322 IFLEPFVFVPIVPSVAYAHWQYLSLTKA-TVTTLSTCLCVFADTGAGVDCYRFLDDETIL 146
IF+EPF IV + W+ L A + ++T C+FAD + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFAD-ASPAKWTRLQDDDVAI 460
Query: 145 DHLTDVLSGVGVCDLIDFI 89
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_A6RYJ9 Cluster: Predicted protein; n=1; Botryotinia
fuckeliana B05.10|Rep: Predicted protein - Botryotinia
fuckeliana B05.10
Length = 72
Score = 34.7 bits (76), Expect = 1.9
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +1
Query: 157 RHQETCSSPL-PRPCPQKHRG-T*KGS-SLWLW*EKGTANARMPQKE 288
RH TC+ P P CP H+G +GS S+WLW EK R QK+
Sbjct: 2 RHDTTCTPPFRPSICPS-HKGIASRGSGSMWLWGEKWRLLRRREQKK 47
>UniRef50_Q6C857 Cluster: Similarities with sp|P43583 Saccharomyces
cerevisiae YFL007w BLM3; n=1; Yarrowia lipolytica|Rep:
Similarities with sp|P43583 Saccharomyces cerevisiae
YFL007w BLM3 - Yarrowia lipolytica (Candida lipolytica)
Length = 2031
Score = 34.3 bits (75), Expect = 2.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -2
Query: 337 CTSGAIFLEPFVFVPIVPSVAYAHWQYLSLTKATVTTLSTCLCV 206
C G FLEP V +P AY Q L T T+TTL T + +
Sbjct: 482 CLQGLAFLEPHVIIPQFLKEAYPSLQGLVETHRTLTTLQTLVAL 525
>UniRef50_Q16Q18 Cluster: 60S ribosomal protein L14; n=4;
Endopterygota|Rep: 60S ribosomal protein L14 - Aedes
aegypti (Yellowfever mosquito)
Length = 229
Score = 33.9 bits (74), Expect = 3.3
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +2
Query: 8 RMSSLKLQKRLAASVMRCG-----KKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKP 172
+ S+ + Q+R AA RC + K+ L +E N I + ++ ++++ +G++ KP
Sbjct: 136 KFSTTRWQERAAAKAKRCNLTDFDRFKLRLARSERNRIVSAQFKKLKKEVVNNGMLFGKP 195
Query: 173 VAVHSRARVRKNTEARRKGRHCGFGKRKVLPMR 271
V R+N +++G+ K K P +
Sbjct: 196 VKGTKPLPKRRNPIPKKEGKKKRVRKNKKAPAK 228
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed;
n=6; Oryza sativa|Rep: Spc97/Spc98 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 33.5 bits (73), Expect = 4.3
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 26 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 196
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 197 VRKNTEARRKGRHCGFG 247
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.7
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 180 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 61
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q9RKR4 Cluster: Putative integral membrane protein; n=2;
Streptomyces coelicolor|Rep: Putative integral membrane
protein - Streptomyces coelicolor
Length = 431
Score = 32.7 bits (71), Expect = 7.5
Identities = 19/39 (48%), Positives = 21/39 (53%)
Frame = -3
Query: 534 VPRGACVPPYFIAAGLSLVAKHLRPGLLSLLPVDVLHEH 418
VP A P Y IAA S + RP L SL+P V HEH
Sbjct: 111 VPSPAVWPLYVIAAFTSALGAVQRPALDSLIPRIVAHEH 149
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 7.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 501 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 382
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_Q41B71 Cluster: Putative uncharacterized protein
precursor; n=1; Exiguobacterium sibiricum 255-15|Rep:
Putative uncharacterized protein precursor -
Exiguobacterium sibiricum 255-15
Length = 540
Score = 32.7 bits (71), Expect = 7.5
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 615 CLLLSGKRGFVFSSERSAAVPPSWRQYVPRGACVPPYFIAAGL 487
CLL+ G + F+ E S+A PP+ + P+ + P F+ GL
Sbjct: 261 CLLVGGSAWWFFADETSSAPPPTKQIVTPQVGEITPTFMVHGL 303
>UniRef50_Q0FWV5 Cluster: Parallel beta-helix repeat; n=3;
Proteobacteria|Rep: Parallel beta-helix repeat -
Roseovarius sp. HTCC2601
Length = 10077
Score = 32.7 bits (71), Expect = 7.5
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -2
Query: 208 VFADTGAGVDCYRFLDDETILDHLTDVLSGVGVCDLIDFI 89
+ + GAG D RFLD T+ H T VL+G G DL++ +
Sbjct: 7542 ILVEGGAGADSIRFLDATTMTGHAT-VLAGAG-DDLVEIV 7579
>UniRef50_Q8IE44 Cluster: Putative uncharacterized protein
MAL13P1.150; n=3; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.150 - Plasmodium
falciparum (isolate 3D7)
Length = 500
Score = 32.7 bits (71), Expect = 7.5
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +1
Query: 355 DRHLYHSLYMKAKGNVF------KNKRVLMEYIHRKKAEKART-KMLSDQAEARRNKVRR 513
+ H Y M K N+F +NK ++ Y KK K R K+L Q + R+N
Sbjct: 331 NEHTYRKALMNLKKNIFTSLKRNRNKSIMDVYYEEKKKYKLRKQKLLELQTKIRKNSQIA 390
Query: 514 HASAAR 531
H+S R
Sbjct: 391 HSSIKR 396
>UniRef50_A2G0K1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 662
Score = 32.3 bits (70), Expect = 10.0
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = +2
Query: 68 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV 175
K+V + N+ NE N+ N+ KM+KD +V +KPV
Sbjct: 557 KQVVSELNQNNENEPQNNLNNLEKMVKDQIVTEKPV 592
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,807,380
Number of Sequences: 1657284
Number of extensions: 13128067
Number of successful extensions: 39411
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 37925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39367
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46881492319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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