Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0683
(557 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 162 2e-40
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 161 4e-40
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 159 1e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 146 8e-36
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 100 2e-21
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 62 3e-10
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 4e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 39 0.003
SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5) 31 0.84
SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.84
SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5) 30 1.1
SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015) 30 1.5
SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06) 29 1.9
SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3) 28 4.5
SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6) 28 4.5
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 28 4.5
SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3) 28 4.5
SB_45916| Best HMM Match : Cadherin (HMM E-Value=0) 28 5.9
SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 162 bits (394), Expect = 2e-40
Identities = 78/85 (91%), Positives = 82/85 (96%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 180
VPAYF+DSQRQATKDAGTI+GLNVLRIINEPTAAAIAYGLDKK ERNVLI+DLGGGTF
Sbjct: 146 VPAYFHDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTF 205
Query: 181 DVSILTIEDGIFEVKSTAGDTHLGG 255
DVS+LTIEDGIFEVKSTAGDTHLGG
Sbjct: 206 DVSVLTIEDGIFEVKSTAGDTHLGG 230
Score = 120 bits (289), Expect = 8e-28
Identities = 59/99 (59%), Positives = 71/99 (71%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEIDSL 425
LG EDFDN+MV+HFV++FK+KYKKD+ N SSSTQASIEIDSL
Sbjct: 228 LGGEDFDNKMVDHFVKQFKQKYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSL 287
Query: 426 FEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAKM 542
FEGIDFYTSIT ARFE LN D+FK PVE+++RD+K+
Sbjct: 288 FEGIDFYTSITRARFEELNQDLFKKTTEPVEQAIRDSKI 326
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 161 bits (391), Expect = 4e-40
Identities = 78/85 (91%), Positives = 80/85 (94%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 180
VPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGLDKK ERNVLIFDLGGGTF
Sbjct: 239 VPAYFNDSQRQATKDAGVISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTF 298
Query: 181 DVSILTIEDGIFEVKSTAGDTHLGG 255
DVS+L+IEDGIFEVKST GDTHLGG
Sbjct: 299 DVSVLSIEDGIFEVKSTHGDTHLGG 323
Score = 112 bits (269), Expect = 2e-25
Identities = 55/99 (55%), Positives = 69/99 (69%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEIDSL 425
LG EDFDN MV+ FV++FK+KYKKD+ N SSSTQASIEIDSL
Sbjct: 321 LGGEDFDNNMVDFFVKQFKQKYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSL 380
Query: 426 FEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAKM 542
++GIDFYTSIT ARFE +NA +FK PVEK+++D+K+
Sbjct: 381 YDGIDFYTSITRARFEEMNAHLFKKTLEPVEKAIKDSKL 419
Score = 39.9 bits (89), Expect = 0.001
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAG 51
VPAYFNDSQRQATKDAG
Sbjct: 171 VPAYFNDSQRQATKDAG 187
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 159 bits (387), Expect = 1e-39
Identities = 76/86 (88%), Positives = 83/86 (96%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 180
VPAYFNDSQRQATKDAGTI+GLNVLR+INEPTAAA+AYGLDK +GE+NVLIFDLGGGTF
Sbjct: 146 VPAYFNDSQRQATKDAGTIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTF 205
Query: 181 DVSILTIEDG-IFEVKSTAGDTHLGG 255
DVSILTI+DG +FEVKSTAGDTHLGG
Sbjct: 206 DVSILTIDDGSLFEVKSTAGDTHLGG 231
Score = 113 bits (272), Expect = 9e-26
Identities = 57/98 (58%), Positives = 66/98 (67%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEIDSL 425
LG EDFDNR+VNHFV EFKRKYKKD++ N SSST+ASIE+DSL
Sbjct: 229 LGGEDFDNRLVNHFVAEFKRKYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSL 288
Query: 426 FEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAK 539
FEGIDFYT I+ ARFE L +D+F PV K+L DAK
Sbjct: 289 FEGIDFYTKISRARFEDLCSDLFLSCLDPVNKALSDAK 326
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 146 bits (355), Expect = 8e-36
Identities = 67/85 (78%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 180
VPAYFND+QRQATKDAG I+GL V+RIINEPTAAAIAYG+DKK GE+N+L+FDLGGGTF
Sbjct: 844 VPAYFNDAQRQATKDAGAIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTF 902
Query: 181 DVSILTIEDGIFEVKSTAGDTHLGG 255
DVS+LTI++G+FEV +T GDTHLGG
Sbjct: 903 DVSLLTIDNGVFEVVATNGDTHLGG 927
Score = 73.3 bits (172), Expect = 1e-13
Identities = 38/99 (38%), Positives = 54/99 (54%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEIDSL 425
LG EDFD ++ HF++ +K+K K++ + S+ QA +EI+S
Sbjct: 925 LGGEDFDQNVMEHFIKLYKKKKGKNIRKDNRAVQKLRREVEKAKRALSTQHQARVEIESF 984
Query: 426 FEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAKM 542
FEG DF +T ARFE LNA +FK PV+K L DA +
Sbjct: 985 FEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADL 1023
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 99.5 bits (237), Expect = 2e-21
Identities = 48/86 (55%), Positives = 63/86 (73%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTF 180
VPA F+ QR AT A +++G+ VLR+INEPTAAA+AYGL KK G NV++ DLGGGT
Sbjct: 176 VPAEFDIKQRNATVKAASLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTL 234
Query: 181 DVSILTIEDGIFEVKSTAGDTHLGGR 258
DVS+L I+ G+F + AG+ LGG+
Sbjct: 235 DVSLLNIQGGMFVTMAMAGNNRLGGQ 260
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 69.3 bits (162), Expect = 2e-12
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKG---TGERNVLIFDLGG 171
VP+Y+ D QR+ DA +GLN LR++N+ TA ++AYG+ K+ RNV+ D+G
Sbjct: 203 VPSYYTDRQRRCMLDASATAGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGH 262
Query: 172 GTFDVSILTIEDGIFEVKSTAGDTHLGGR 258
+ V I G +V STA + +LGGR
Sbjct: 263 SSLQVCITAFLKGQLKVLSTAVEPNLGGR 291
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSST-QASIEIDS 422
LG DFD +V HF QEFK KYK D+ ++ S++T + I I+
Sbjct: 288 LGGRDFDYVLVEHFAQEFKTKYKIDVHSSIKAKIKLGAECEKLKKLMSANTSEIPINIEC 347
Query: 423 LFEGIDFYTSITXARFEXLNADMFKFYHGPVEKSL 527
E D + + A+FE L AD+ K P+ +L
Sbjct: 348 FMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSAL 382
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 62.1 bits (144), Expect = 3e-10
Identities = 42/75 (56%), Positives = 46/75 (61%), Gaps = 26/75 (34%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLN------------------------VLRIINEPTAAAI 108
VPA+FND+QRQATKDAGTI+GL+ VLRIINEPTAAAI
Sbjct: 45 VPAHFNDAQRQATKDAGTIAGLDVLSRTASERPPSRFRRRRPHGRSRVLRIINEPTAAAI 104
Query: 109 AYGLDKK--GTGERN 147
AYGLDK G ERN
Sbjct: 105 AYGLDKARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 60.5 bits (140), Expect = 9e-10
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +1
Query: 148 VLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 255
+ ++DLGGGTFD+SIL I+ G+FEVK+T GDT+LGG
Sbjct: 2 IAVYDLGGGTFDISILEIQKGVFEVKATNGDTYLGG 37
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKRKYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEIDSL 425
LG EDFDN ++ + EFK++ DL+ + SSS Q I + +
Sbjct: 35 LGGEDFDNTLLKFLIAEFKKESGVDLSKDSMALQRLREAAEKAKIELSSSVQTDINLPYI 94
Query: 426 FEGID----FYTSITXARFEXLNADMFKFYHGPVEKSLRDAKMG*G 551
++ ++FE L AD+ GP +K L+DA++ G
Sbjct: 95 TVDASGPKHLNMKLSRSKFESLVADLINRTVGPCKKCLQDAEINKG 140
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Frame = +1
Query: 1 VPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKK----GTGERNVLIFDLG 168
VP +FN ++R+A A + GLNVL+I+N TA A+ YGL ++ T E++ + +D+G
Sbjct: 112 VPPFFNQAERRALLRAAELVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMG 171
Query: 169 GGTFDVSIL 195
+ +I+
Sbjct: 172 ASSTVATIV 180
Score = 48.0 bits (109), Expect = 5e-06
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 2/101 (1%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKR--KYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASIEID 419
LG D R+ +H VQ FK+ K+K ++ + S++ + +I+
Sbjct: 210 LGGHAIDMRLRDHLVQLFKKNYKFKGEVTQSSRAMAKFYKEALRVKQVLSANNEIFAQIE 269
Query: 420 SLFEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAKM 542
+F+G DF +T E + D+F GPV ++L+ A M
Sbjct: 270 GVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASM 310
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +1
Query: 139 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGR 258
+ VL++ LGG + DV++L++ +G+++V +T D LGGR
Sbjct: 153 DSTVLVYRLGGASHDVTLLSVINGMYKVLATEYDGALGGR 192
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Frame = +3
Query: 246 LGREDFDNRMVNHFVQEFKR-----KYKKDLATNXXXXXXXXXXXXXXXXXXSSSTQASI 410
LG +FD +++ +FKR K+K D TN S+ A+
Sbjct: 189 LGGRNFDEVLLDLLANDFKRQVLLWKWKIDPLTNKRSKTKLQTSAEQCKNILSTLESANC 248
Query: 411 EIDSLFEGIDFYTSIT 458
+DSL EGIDF ++
Sbjct: 249 SVDSLCEGIDFQGQVS 264
>SB_29854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3235
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 97 AAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGRTLT 267
A A L +G E + D G GT VS + +E+G +++ D H+ G T
Sbjct: 1505 AGAGGLSLAIEGPSEAKLTCQDNGDGTCSVSYIPVEEGDYDIHIKFADEHIPGSPFT 1561
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 145 NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGG 255
+ LI D G+F VS E+GI ++ GD H+ G
Sbjct: 1428 DTLITDNQDGSFGVSYTPFEEGIHDLAVKFGDDHIPG 1464
>SB_29289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 956
Score = 31.9 bits (69), Expect = 0.37
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCMXXGK 376
LCP ++ + GP +++E AFA C+ GK
Sbjct: 169 LCPSPEQNGEPGPMFEREGGDAFANCVARGK 199
>SB_27085| Best HMM Match : Filamin (HMM E-Value=1.5)
Length = 634
Score = 30.7 bits (66), Expect = 0.84
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +1
Query: 148 VLIFDLGGGTFDVSILTIEDGIFEVK 225
V I+DLG GT++++IL E G++ ++
Sbjct: 319 VPIYDLGNGTYEMAILFHEPGVYSIR 344
>SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 414 IDSLFEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRD 533
I ++ G + S A F+ + AD KFY+GP+ KS ++
Sbjct: 43 IKTIGVGYNMERSSARADFKSIGADFDKFYNGPLTKSTKE 82
>SB_28120| Best HMM Match : ScdA_N (HMM E-Value=6.5)
Length = 452
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCMXXGK 376
LCP ++ GP +++E S AFA C+ GK
Sbjct: 206 LCPLPEQNGGPGPMFEREGSDAFANCVTRGK 236
>SB_41892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 275 GQPLCPGVQEEIQKGPRYQQESS*AFAYCM 364
G LCP ++ + GP +++E S AFA C+
Sbjct: 218 GYKLCPLPEQNGEPGPMFEREGSDAFANCV 247
>SB_41920| Best HMM Match : Filamin (HMM E-Value=0.00015)
Length = 600
Score = 29.9 bits (64), Expect = 1.5
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 154 IFDLGGGTFDVSILTIEDGIFEV 222
+FDLG G+++V L +E G++ V
Sbjct: 311 VFDLGNGSYEVLFLVMEPGVYRV 333
>SB_51674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +2
Query: 161 TSAAVPSTXPSLPSRMVSSR*NPPPATP 244
T A P P++PSR +R PPP P
Sbjct: 784 TKPATPRVPPNIPSRPPGARPTPPPPPP 811
>SB_29219| Best HMM Match : 7tm_1 (HMM E-Value=9.8e-06)
Length = 863
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +3
Query: 387 SSSTQASIEIDSLFEGIDFYTSITXARFEXLNADMFKFYHGPVEKSLRDAKMG 545
SSS+ AS+ SLF ++F +++ E L A F FYH K+ +G
Sbjct: 623 SSSSSASLGYFSLFSSVNFLAAVS---VERLVAVAFPFYHRATGKTFYGVLIG 672
>SB_38784| Best HMM Match : Apo-VLDL-II (HMM E-Value=8.3)
Length = 439
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCM 364
LCP ++ + GP +++E S AFA C+
Sbjct: 107 LCPLPEQNGEPGPMFEREGSDAFANCV 133
>SB_55740| Best HMM Match : C1_1 (HMM E-Value=3.6)
Length = 533
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCM 364
LCP ++ + GP +++E S AFA C+
Sbjct: 74 LCPLPEQNGEPGPMFEREGSDAFANCV 100
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCMXXGKEDL 385
LCP ++ + GP +++E AFA C+ D+
Sbjct: 202 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 235
>SB_29335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 840
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 284 LCPGVQEEIQKGPRYQQESS*AFAYCMXXGKEDL 385
LCP ++ + GP +++E AFA C+ D+
Sbjct: 140 LCPLPEQNGEHGPMFEREGIYAFANCVARSSSDM 173
>SB_14895| Best HMM Match : CcmE (HMM E-Value=5.3)
Length = 485
Score = 28.3 bits (60), Expect = 4.5
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1
Query: 233 AVDFTSKIPSSMVRMXTSKVPPPRSKISTFRSPVPF 126
+V S+IP S + VPPPRS ++ +P PF
Sbjct: 43 SVQIDSQIPGSTFQTVLHPVPPPRS-VAMDNAPKPF 77
>SB_45916| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 1774
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 156 DKYISFSSTLFVKTVSNRSSSRFIDDSEN 70
+K ISF +LF+ VSN S+ R+I +E+
Sbjct: 752 NKVISFGPSLFMDKVSNASAGRYICIAES 780
>SB_34296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3464
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 152 LSLTSAAVPSTXPSLPSRMVSSR*NPPPA 238
LSL+ ST PSLP+ S+ N PPA
Sbjct: 1149 LSLSEGDTSSTEPSLPTAKPSASSNIPPA 1177
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,971,369
Number of Sequences: 59808
Number of extensions: 321504
Number of successful extensions: 1165
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1300738331
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -