Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e96h0681
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.4  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   5.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.8  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   9.8  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.8  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 325 IRGLFGSFMIKYLPSFCF 272
           I G+FG F++ ++P + F
Sbjct: 130 ILGVFGEFVLVFVPDYVF 147


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 695 FVKRDTKFLLHVLNI 651
           F++++ KFL H+L I
Sbjct: 496 FIQKEVKFLGHILTI 510


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 230 TTPGASCGDHRHMH 271
           +TP  SC +++H+H
Sbjct: 150 STPTNSCMEYQHLH 163


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 630 LLINTKIYLKSLYLKFYTALENDQ 559
           + IN  + L  LY+  Y  L N+Q
Sbjct: 221 ITINFVVLLGDLYVTLYIILTNNQ 244


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 230 TTPGASCGDHRHMH 271
           +TP  SC +++H+H
Sbjct: 150 STPTNSCMEYQHLH 163


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 230 TTPGASCGDHRHMH 271
           +TP  SC +++H+H
Sbjct: 150 STPTNSCMEYQHLH 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,133
Number of Sequences: 336
Number of extensions: 2310
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)