Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e96h0680
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 125 2e-29
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 125 2e-29
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 125 2e-29
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 125 2e-29
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 77 9e-15
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 77 1e-14
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 58 6e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 56 2e-08
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 35 0.047
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 35 0.047
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.047
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.047
At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3, ubiqu... 33 0.11
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.14
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.14
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.19
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.19
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 32 0.25
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 32 0.25
At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 32 0.25
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 32 0.33
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 32 0.33
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 31 0.58
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.3
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.3
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.3
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.8
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.8
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 4.1
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 5.4
At5g17060.1 68418.m01999 ADP-ribosylation factor, putative simil... 27 9.5
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 125 bits (302), Expect = 2e-29
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 491 NGQTRE 508
+GQTRE
Sbjct: 130 DGQTRE 135
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQ+I N+MD T P YS+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSK 164
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 255 KGSFKYAWVLDKLKAERD 308
K SFKYAWVLDKLKAER+
Sbjct: 51 KRSFKYAWVLDKLKAERE 68
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 125 bits (302), Expect = 2e-29
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 491 NGQTRE 508
+GQTRE
Sbjct: 130 DGQTRE 135
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQ+I N+MD T P YS+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSK 164
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 255 KGSFKYAWVLDKLKAERD 308
K SFKYAWVLDKLKAER+
Sbjct: 51 KRSFKYAWVLDKLKAERE 68
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 125 bits (302), Expect = 2e-29
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 491 NGQTRE 508
+GQTRE
Sbjct: 130 DGQTRE 135
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQ+I N+MD T P YS+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSK 164
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 255 KGSFKYAWVLDKLKAERD 308
K SFKYAWVLDKLKAER+
Sbjct: 51 KRSFKYAWVLDKLKAERE 68
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 125 bits (302), Expect = 2e-29
Identities = 57/66 (86%), Positives = 62/66 (93%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGISK
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISK 129
Query: 491 NGQTRE 508
+GQTRE
Sbjct: 130 DGQTRE 135
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 106 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK 51
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 511 ALLAFTLGVKQLIVGVNQMDXTEPPYSE 594
ALLAFTLGVKQ+I N+MD T P YS+
Sbjct: 137 ALLAFTLGVKQMICCCNKMDATTPKYSK 164
Score = 37.9 bits (84), Expect = 0.005
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +3
Query: 255 KGSFKYAWVLDKLKAERD 308
K SFKYAWVLDKLKAER+
Sbjct: 51 KRSFKYAWVLDKLKAERE 68
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 77.0 bits (181), Expect = 9e-15
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G +
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYER 223
Query: 491 NGQTRE 508
GQTRE
Sbjct: 224 GGQTRE 229
Score = 59.7 bits (138), Expect = 1e-09
Identities = 23/49 (46%), Positives = 37/49 (75%)
Frame = +1
Query: 115 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKD 261
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ ++
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRE 146
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 76.6 bits (180), Expect = 1e-14
Identities = 32/67 (47%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGFDN 361
Query: 491 -NGQTRE 508
GQTRE
Sbjct: 362 LKGQTRE 368
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 121 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGK 258
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GK
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGK 283
Score = 31.1 bits (67), Expect = 0.58
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 252 GKGSFKYAWVLDKLKAERD 308
GKGSF YAW LD+ ER+
Sbjct: 282 GKGSFAYAWALDESAEERE 300
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 57.6 bits (133), Expect = 6e-09
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 178
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 237
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 55.6 bits (128), Expect = 2e-08
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDG 166
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 112 KEKTHINIVVIGHVDSGKSTTT 177
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 34.7 bits (76), Expect = 0.047
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 491 NGQTR 505
+ Q R
Sbjct: 178 DRQMR 182
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 34.7 bits (76), Expect = 0.047
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISK 490
GITI A Y V IID PGH DF + D A+L++ + G I+
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITV 177
Query: 491 NGQTR 505
+ Q R
Sbjct: 178 DRQMR 182
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGI 207
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +2
Query: 314 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At2g04660.1 68415.m00475 E3 ubiquitin ligase, putative E3,
ubiquitin ligase; contains similarity to
anaphase-promoting complex subunit 2 GI:6180009 from
[Homo sapiens]
Length = 865
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -2
Query: 415 CDHVLDEISVSRSINDGNIVLAS---FELPESNIDCDTXSRSAFSLSNTQAYLKDPFPFP 245
C+ +L+++ S+ +N NI AS EL E+ + DT + + S + +P P
Sbjct: 595 CEIMLNDLIDSKRVNT-NIKKASQTGAELRENELSVDTLTSTILSTNFWPPIQDEPLELP 653
Query: 244 GPPSRTSRWYVCQYHHI 194
GP + Y +YH I
Sbjct: 654 GPVDKLLSDYANRYHEI 670
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 344 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +1
Query: 103 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 213
K EK N +I H+D GKST L+ G I K
Sbjct: 60 KFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 314 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGG 204
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.19
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 32.7 bits (71), Expect = 0.19
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 118 KTHINIVVIGHVDSGKSTTTGHLIYKCG 201
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +2
Query: 311 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 32.3 bits (70), Expect = 0.25
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 347 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
T + +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 566
Score = 32.3 bits (70), Expect = 0.25
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +3
Query: 234 EGGPGNGKGSFKYAWVLDKLKAERDXVSQSILLSGSSKLASTMLPS 371
EGGPG S K+ W+ D + +E D +S + + M+P+
Sbjct: 167 EGGPGRCYSSGKHVWLSDAVNSESDYCFRSFMAKSAGIRTIVMVPT 212
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 31.9 bits (69), Expect = 0.33
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +2
Query: 359 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
+V+ +D PGH + M+ G + D A+LI+AA
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 31.9 bits (69), Expect = 0.33
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Frame = +2
Query: 341 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 457
FE SK +V+ +D PGH + M+ G + D A+L++AA
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 31.1 bits (67), Expect = 0.58
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 311 GITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
GITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 228
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 368 IIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 350 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 130 NIVVIGHVDSGKSTTTGHLIYKCG 201
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 362 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 451
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/58 (29%), Positives = 29/58 (50%)
Frame = -2
Query: 454 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTXSRSAFSLSN 281
++D+HS +L+ D + D + ++ N+VL F P+ D T +R A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 371 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 466
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
>At5g17060.1 68418.m01999 ADP-ribosylation factor, putative similar
to ADP-ribosylation factor 1; ARF 1 (GP:385340)
{Drosophila melanogaster)
Length = 192
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 175 TGHLIYKCGGIDKRTIEKFEKEAQEMGKDP 264
T LIY +D+ I K ++E QE+ KDP
Sbjct: 85 TDGLIYVVDSLDRERIGKAKQEFQEIIKDP 114
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,735,634
Number of Sequences: 28952
Number of extensions: 247482
Number of successful extensions: 766
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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